BAC Information

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BAC

Clone NameB6Ng01-099F16
Chromosome1 (Build37)
Map Location 191,818,806 - 191,999,647
singlet/doubletdoublet
Overlap geneProx1
Upstream geneKctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf, Ptpn14, LOC100042438, Smyd2
Downstream geneLOC100039394, EG666975, Rps6kc1, Angel2, Vash2, LOC100039445, LOC666987, 9630055N22Rik, 1700022P22Rik, Tatdn3, Nsl1, 9130211I03Rik, 4933417M04Rik, Atf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099F16.bB6Ng01-099F16.g
ACCDH909170DH909171
length183937
definitionDH909170|Mus musculus domesticus DNA, BAC clone: B6Ng01-099F16, 5' end.DH909171|Mus musculus domesticus DNA, BAC clone: B6Ng01-099F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(191,818,806 - 191,818,988)(191,998,710 - 191,999,647)
sequence
cctggagagtttcagagcgattctgtgaaagctgaggaccgcagcctgca
gcaagaacacttttttttttaaagtgtgtgcgcacatgtgcgtgtattca
cagctgggtgtggattcgagtgtgtgcgtgcgtgcgtgcgtgcgtgcgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtat
gaattctccccctggactcagagaccaaaggaaaggagccaggaaaacac
cccaaacccttaaacagcactaggcaagggggcgatcactctgccatccc
ttgctatggcccaacctcttgctagtccctgcaaagtgtccccatctcag
caccagtgtctgcaccagctttggcgcgccacctccgcagcaacaggcgg
gggaggggacatggcggggacagcgcgggcctggcgatggcccacatctc
cctgccgcgtgggacactcgcggcctgggatcaggtggctgccctgttcg
gtccggtgtgcgccgaaccggggcgaaccgagctgaaaggcagcttatgg
ctgctaaggaaggaggcgagggccgcaggacacgggtgggggcaggccag
gcagcgggcaggtggcccggatccctgcacgctcggcggcgaacaagcca
cagcatctatcccccccggcctggatgctgcgaaccaacggagaaggcca
ggcaggagtgaggacagggggcaccgcgtgggagccccgctcgcgcctgg
cgcccgccgaacacactccccgccttccagcccttcccatagtttttcca
gtacagcgggagtgttcctcgcaggctttggaaagccagcaccgaggggg
ctccgactcggagagaggtggccttgggcatgaagacaacagaaggccac
gcgggccactctcgtagagcattacaacccctgccaggctggaaagagtg
gcggtgcccagaggcttggcgtgattttgcccactgtgccccgcgtgccg
tggagtctgctgacacgagcactcttacccaccccacttccgcgccctgc
gccggagcctgcttttgtcttcgctgacgcaagactgggctgatcacacc
cactggtggtggcggcgatgtgtgttggtgggtgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_191818806_191818988
seq2: B6Ng01-099F16.b_52_234

seq1  CCTGGAGAGTTTCAGAGCGATTCTGTGAAAGCTGAGGACCGCAGCCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGAGTTTCAGAGCGATTCTGTGAAAGCTGAGGACCGCAGCCTGCA  50

seq1  GCAAGAACACTTTTTTTTTTAAAGTGTGTGCGCACATGTGCGTGTATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAACACTTTTTTTTTTAAAGTGTGTGCGCACATGTGCGTGTATTCA  100

seq1  CAGCTGGGTGTGGATTCGAGTGTGTGCGTGCGTGCGTGCGTGCGTGCGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGGTGTGGATTCGAGTGTGTGCGTGCGTGCGTGCGTGCGTGCGTG  150

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  183
      |||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  183

seq1: chr1_191998710_191999647
seq2: B6Ng01-099F16.g_72_1008 (reverse)

seq1  ACACACACACCAACACAC-TCGCCGCCACCACCAGTGGGTGTGATCAG-C  48
      | |||| ||||||||||| ||||||||||||||||||||||||||||| |
seq2  AGACACCCACCAACACACATCGCCGCCACCACCAGTGGGTGTGATCAGCC  50

seq1  CAGTCTTGCTGTCAGCGAAGTACAAAAGGCAGGCTCCGGCCGCAGGGGCG  98
      ||||||||| |||||||||| |||||| ||||||||||| |||| |||||
seq2  CAGTCTTGC-GTCAGCGAAG-ACAAAA-GCAGGCTCCGG-CGCA-GGGCG  95

seq1  CGGGAGTGGGGTGGGTGAGAGTGCTCGTGTCAGCAGACTCCACGGCACGC  148
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  CGGAAGTGGGGTGGGTAAGAGTGCTCGTGTCAGCAGACTCCACGGCACGC  145

seq1  GGGGCACAGTGGGCAAAATCACGCCAAGCCTCTGGGCACCGCCACTCTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACAGTGGGCAAAATCACGCCAAGCCTCTGGGCACCGCCACTCTTT  195

seq1  CCAGCCTGGCA-GGGTTGTAATGCTCTACGAGAGTGG-CCGCGTGGCCTT  246
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  CCAGCCTGGCAGGGGTTGTAATGCTCTACGAGAGTGGCCCGCGTGGCCTT  245

seq1  CTGTTGTCTTCATGCCCAAGGCCACCTCTCTCCGAGTCGGAGCCCCCTCG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTCTTCATGCCCAAGGCCACCTCTCTCCGAGTCGGAGCCCCCTCG  295

seq1  GTGCTGGCTTTCCAAAGCCTGCGAGGAACACTCCCGCTGTACTGGAAAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGCTTTCCAAAGCCTGCGAGGAACACTCCCGCTGTACTGGAAAAA  345

seq1  CTATGGGAAGGGCTGGAAGGCGGGGAGTGTGTTCGGCGGGCGCCAGGCGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGAAGGGCTGGAAGGCGGGGAGTGTGTTCGGCGGGCGCCAGGCGC  395

seq1  GAGCGGGGCTCCCACGCGGTGCCCCCTGTCCTCACTCCTGCCTGGCCTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGGGGCTCCCACGCGGTGCCCCCTGTCCTCACTCCTGCCTGGCCTTC  445

seq1  TCCGTTGGTTCGCAGCATCCAGGCCGGGGGGGATAGATGCTGTGGCTTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTGGTTCGCAGCATCCAGGCCGGGGGGGATAGATGCTGTGGCTTGT  495

seq1  TCGCCGCCGAGCGTGCAGGGATCCGGGCCACCTGCCCGCTGCCTGGCCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCGCCGAGCGTGCAGGGATCCGGGCCACCTGCCCGCTGCCTGGCCTG  545

seq1  CCCCCACCCGTGTCCTGCGGCCCTCGCCTCCTTCCTTAGCAGCCATAAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCGTGTCCTGCGGCCCTCGCCTCCTTCCTTAGCAGCCATAAGC  595

seq1  TGCCTTTCAGCTCGGTTCGCCCCGGTTCGGCGCACACCGGACCGAACAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCAGCTCGGTTCGCCCCGGTTCGGCGCACACCGGACCGAACAGG  645

seq1  GCAGCCACCTGATCCCAGGCCGCGAGTGTCCCACGCGGCAGGGAGATGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCACCTGATCCCAGGCCGCGAGTGTCCCACGCGGCAGGGAGATGTG  695

seq1  GGCCATCGCCAGGCCCGCGCTGTCCCCGCCATGTCCCCTCCCCCGCCTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCGCCAGGCCCGCGCTGTCCCCGCCATGTCCCCTCCCCCGCCTGT  745

seq1  TGCTGCGGAGGTGGCGCGCCAAAGCTGGTGCAGACACTGGTGCTGAGATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCGGAGGTGGCGCGCCAAAGCTGGTGCAGACACTGGTGCTGAGATG  795

seq1  GGGACACTTTGCAGGGACTAGCAAGAGGTTGGGCCATAGCAAGGGATGGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACTTTGCAGGGACTAGCAAGAGGTTGGGCCATAGCAAGGGATGGC  845

seq1  AGAGTGATCGCCCCCTTGCCTAGTGCTGTTTAAGGGTTTGGGGTGTTTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGATCGCCCCCTTGCCTAGTGCTGTTTAAGGGTTTGGGGTGTTTTC  895

seq1  CTGGCTCCTTTCCTTTGGTCTCTGAGTCCAGGGGGAGAATTC  938
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCCTTTCCTTTGGTCTCTGAGTCCAGGGGGAGAATTC  937