BAC Information

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BAC

Clone NameB6Ng01-099I22
Chromosome1 (Build37)
Map Location 31,177,002 - 31,178,000
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616
Downstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056, LOC100041238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099I22.bB6Ng01-099I22.g
ACCDH909320DH909321
length1,013694
definitionDH909320|Mus musculus domesticus DNA, BAC clone: B6Ng01-099I22, 5' end.DH909321|Mus musculus domesticus DNA, BAC clone: B6Ng01-099I22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagacctattcccctctttacctcacagtttgatgttttcctt
ttcatgcttcaacaataagagataccatgaacatcattttgctaaaaact
tacacacacacacacacacacacacacacacaaacacacacacacacaca
ggcttgcaataagaagttgaaattttaatcaaaagttaattacaaagaag
aggaggttagagctatttctgaaggttgttttcaatttaaagggtctcca
cacacattcacatttcaaattattttcttttccttttacattcgtgtgtg
tgtgtgtgtgtgtgtgtgtacaggggcagacttgtgccatggtatagctg
tggaggtcagagaacaactttttggagttagttctcttttttcactatag
gtcccagggatcaaacttagattgtcagatttgggtagcaagtgtctata
cccactgatccaacttgctttcccagactctcacattttttaattattaa
cttgaaatgtttggaaggcaatatagtttacagtagttgactggcctaaa
tcaagtctctgtgatattgcactctctaatccttaaactagtgatccaaa
agactctgaaccccaaattattataaatgtgttttctctccttgtgggta
gcttaggtaaaataaagatttataaaagagacagccttctttgtggccag
attatagagaatttttattataaatcaaatggccaaaatctcagctcaca
tctgaaaaaacccaacctgagatgtaatgaatagataagatttaagttta
tcacttcaataaaattacaattgatactggagacctattttccttcagga
aataagataagaataaaagctggcctccttaattatctatatatcttcag
ccataaatacataagataacaaatgctctggcatgagtccgttttaattc
caatatgtgatgggaagacatacgacacggcgtggagttatattgttcag
accggggtttcaa

gaattctgcactaaacccatctggtcctggtctttttgtggttgggagac
atttagtgactgcttctgtttcttgatgatttttgtgattgtttagatgg
tttttctgatcctgctttagctttggtatttggtatctgttgagttgtgt
tgagtagaagttttggtagtaggtgattttgtgagttgccacagtttccg
ttgttatattttccttttcatttctgattttattaatttggatcctgtct
ctgtgtcctctggttagtctgattaacactttatgtatcttgttaatttt
ctcaaagaaccagctcctaattttgtggattctttgtatagttctttttt
tttttttttgtcttggttgatttcagccctgagtttgattatttttgcct
tctcttcctcttgggtttatttggttctttttttctagagctttcaggtg
tgctgttaagctgctagtatatgctctcttcagtttccttttggagacac
tcagaggtagagctatgagttttcttcttagcactgctttcattatgtcc
cataagtttgggtatgttgtaccttcattcccattacattctaaaaagtc
ttttatttctttcttaaccaagttattattgagttatcatagagaattgt
tcatcttctatggtgttttttttttatttctgttgttttgtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31177002_31178000
seq2: B6Ng01-099I22.b_46_1058 (reverse)

seq1  TTGAAACCACAGTCTGAACATTATAACT-CACGCC-TGTCGTATGTC-TC  47
      |||||||| | ||||||||| ||||||| |||||| ||||||||||| ||
seq2  TTGAAACCCCGGTCTGAACAATATAACTCCACGCCGTGTCGTATGTCTTC  50

seq1  CCATCACATATT-GAATTAAAAACGAC-CATGCCAG-GCATTTGTTATCT  94
      |||||||||||| |||||||||  ||| |||||||| |||||||||||||
seq2  CCATCACATATTGGAATTAAAACGGACTCATGCCAGAGCATTTGTTATCT  100

seq1  TATTGTATTTATGGCTG-AGATATATAGATAATT-AGGA-GCCAGCTTTT  141
      || |||||||||||||| |||||||||||||||| |||| ||||||||||
seq2  TA-TGTATTTATGGCTGAAGATATATAGATAATTAAGGAGGCCAGCTTTT  149

seq1  ATTTCTTATCTTATTTCTTGAA-GAAAATAGGTCTCCAGTATCAATTGTA  190
      | ||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  A-TTCTTATCTTATTTCCTGAAGGAAAATAGGTCTCCAGTATCAATTGTA  198

seq1  ATTTTATTTGAAGTGATTAACTTAAATCTTATCTATTCATTACATCTCAG  240
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTTTA-TTGAAGTGATAAACTTAAATCTTATCTATTCATTACATCTCAG  247

seq1  GTTGGG-TTTTTCAGATGTGAGCTGAGA-TTTGGCCATTTGA-TTATAAT  287
      |||||| ||||||||||||||||||||| ||||||||||||| |||||||
seq2  GTTGGGTTTTTTCAGATGTGAGCTGAGATTTTGGCCATTTGATTTATAAT  297

seq1  AAAAATTCTCTATAATCTGGCCAC-AAGAAGGCTGTCTCTTTTAT-AATC  335
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  AAAAATTCTCTATAATCTGGCCACAAAGAAGGCTGTCTCTTTTATAAATC  347

seq1  -TTATTTTACCTAAGCTACCCACAAGGAGAG-AAACACATTTATAATAAT  383
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTATTTTACCTAAGCTACCCACAAGGAGAGAAAACACATTTATAATAAT  397

seq1  TTGGGGTTCAGAGTCTTTTGGATCACTAGTTTAAGGATTAGAGAGTGCAA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTCAGAGTCTTTTGGATCACTAGTTTAAGGATTAGAGAGTGCAA  447

seq1  TATCACAGAGACTTGATTTAGGCCAGTCAACTACTGTAAACTATATTGCC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAGAGACTTGATTTAGGCCAGTCAACTACTGTAAACTATATTGCC  497

seq1  TTCCAAACATTTCAAGTTAATAATTAAAAAATGTGAGAGTCTGGGAAAGC  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACATTTCAAGTTAATAATTAAAAAATGTGAGAGTCTGGGAAAGC  547

seq1  AAGTTGGATCAGTGGGTATAGACACTTGCTACCCAAATCTGACAATCTAA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGATCAGTGGGTATAGACACTTGCTACCCAAATCTGACAATCTAA  597

seq1  GTTTGATCCCTGGGACCTATAGTGAAAAAAGAGAACTAACTCCAAAAAGT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATCCCTGGGACCTATAGTGAAAAAAGAGAACTAACTCCAAAAAGT  647

seq1  TGTTCTCTGACCTCCACAGCTATACCATGGCACAAGTCTGCCCCTGTACA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTGACCTCCACAGCTATACCATGGCACAAGTCTGCCCCTGTACA  697

seq1  CACACACACACACACACACACACGAATGTAAAAGGAAAAGAAAATAATTT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACGAATGTAAAAGGAAAAGAAAATAATTT  747

seq1  GAAATGTGAATGTGTGTGGAGACCCTTTAAATTGAAAACAACCTTCAGAA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGAATGTGTGTGGAGACCCTTTAAATTGAAAACAACCTTCAGAA  797

seq1  ATAGCTCTAACCTCCTCTTCTTTGTAATTAACTTTTGATTAAAATTTCAA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCTAACCTCCTCTTCTTTGTAATTAACTTTTGATTAAAATTTCAA  847

seq1  CTTCTTATTGCAAGCCTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTG  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATTGCAAGCCTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTG  897

seq1  TGTGTGTGTGTGTGTAAGTTTTTAGCAAAATGATGTTCATGGTATCTCTT  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTAAGTTTTTAGCAAAATGATGTTCATGGTATCTCTT  947

seq1  ATTGTTGAAGCATGAAAAGGAAAACATCAAACTGTGAGGTAAAGAGGGGA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGAAGCATGAAAAGGAAAACATCAAACTGTGAGGTAAAGAGGGGA  997

seq1  ATAGGTCTATGAATTC  999
      ||||||||||||||||
seq2  ATAGGTCTATGAATTC  1013


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