BAC Information

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BAC

Clone NameB6Ng01-101O01
Chromosome1 (Build37)
Map Location 17,352,523 - 17,492,627
singlet/doubletdoublet
Overlap geneLOC383495, Rbm6-ps1, Ppia-ps1_125.1
Upstream geneStau2, Ube2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306, Jph1, Gdap1
Downstream genePi15, Crispld1, LOC665564, LOC100040126, Crisp4, EG574082, EG654460, Defb17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101O01.bB6Ng01-101O01.g
ACCDH910930DH910931
length941734
definitionDH910930|Mus musculus domesticus DNA, BAC clone: B6Ng01-101O01, 5' end.DH910931|Mus musculus domesticus DNA, BAC clone: B6Ng01-101O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,492,101 - 17,492,627)(17,352,523 - 17,353,252)
sequence
gaattctcctgtggttatcatctcttgtcatttctgtgataaacataatt
cctacaagagaatcacttgactccatacagtcatccagaccaacaaacac
cagggatatccagatggcaaaaagcaagtacaagaccataagcaacagaa
gcccaaatacatgggcatcatcagaacccaattctcccaccacagtcagc
cctaaatacaccaacacacctgaaaatcgggaatctgttctaaaatccta
tcttatgatgataaggaggatatcaatgactcacttaaagaaatacagga
aaacacaggtaaacaggtgagggaattaaataaagtgatacaaggcctaa
aagtggaagtagaaacaataaagaaaacaaaaatgaaggaaaacctggaa
atggaaaacctaggaaataggccaggaattacagatgtaagtatttccaa
cagaatacaagaggtagaagagagaatctcaggtgtagaagatacagttg
aagagattaacacaattcttaaagaaaattcaaaacataagaaactacta
acccaaagcatccaggaaattcaggacacaatgaaaaacaaaaacaaaac
aaaaaacaaaaaaaaaaaaaccaaaaaaaacaaaaacaaaaacaaaaaac
aaaaaaaaaaacaaatctaagaataatcagaatagaggagaataatgatt
cccatctcaaaggacctgaaaatgtcttcaacaaaatcacagaagaaatc
ttccctaacctaaagaagatgatcataaaggtacaagaagcctataaaac
accaaataaatgggaccagaaaagaaaatcttcttgtcacataataatca
aaacactaaatgcacagaacaaaagaaagaatattaaaagctgcaagggg
aaaaggccaaggtaaaatacaaaggtaatccctatcagaat
gaattctgtgctaaagtatctatttacaggatccagacaaaatgacccat
tgtcctaggtattcccaaaggctatttaagaccttatatctgaggacaat
aggaaatattgggtaaaagcagatgttaagaagtacccttttctattagc
tatatctgggttgctatggtttggacatggcttgagtatttcctgtggtt
cataccttattcattactgttttgtcagggggtaagagcaactttcagat
atagaaactagtaaaaagcagtcatgtccttttgggagccaatagctaga
gcacatagagcagggtgcttaaccctgttgtcaatatttttagatctaaa
acaagaatgaaaataatccttctggtattggagttcaggctctgaatgtt
ttatataaatacttgtgtttgaataatagcaagcaataaacctgggctga
gggacattcttctttacctgtatattcatcttactgaccctcaccttatc
aatgccaaatattatacatgacaaagtatttattctttgaccaatgcata
atgtatctcacagatacttttctcttattactactggagacgtttatagt
tttcataatgaatatttttcctggattttcctacaaaattctatacgttt
ctagaattaagtcctctttccttttgaatctgttcttttaaaactttctc
agtgattttctgagttttctgcttaaaatggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_17492101_17492627
seq2: B6Ng01-101O01.b_44_570 (reverse)

seq1  TTTCTTTAAGAATTGTGTTAATCTCTTCAACTGTATCTTCTACACCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAAGAATTGTGTTAATCTCTTCAACTGTATCTTCTACACCTGAG  50

seq1  ATTCTCTCTTCTACCTCTTGTATTCTGTTGGAAATACTTACATCTGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTTCTACCTCTTGTATTCTGTTGGAAATACTTACATCTGTAAT  100

seq1  TCCTGGCCTATTTCCTAGGTTTTCCATTTCCAGGTTTTCCTTCATTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCTATTTCCTAGGTTTTCCATTTCCAGGTTTTCCTTCATTTTTG  150

seq1  TTTTCTTTATTGTTTCTACTTCCACTTTTAGGCCTTGTATCACTTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTATTGTTTCTACTTCCACTTTTAGGCCTTGTATCACTTTATTT  200

seq1  AATTCCCTCACCTGTTTACCTGTGTTTTCCTGTATTTCTTTAAGTGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTCACCTGTTTACCTGTGTTTTCCTGTATTTCTTTAAGTGAGTC  250

seq1  ATTGATATCCTCCTTATCATCATAAGATAGGATTTTAGAACAGATTCCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATCCTCCTTATCATCATAAGATAGGATTTTAGAACAGATTCCCG  300

seq1  ATTTTCAGGTGTGTTGGTGTATTTAGGGCTGACTGTGGTGGGAGAATTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGGTGTGTTGGTGTATTTAGGGCTGACTGTGGTGGGAGAATTGG  350

seq1  GTTCTGATGATGCCCATGTATTTGGGCTTCTGTTGCTTATGGTCTTGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGATGATGCCCATGTATTTGGGCTTCTGTTGCTTATGGTCTTGTAC  400

seq1  TTGCTTTTTGCCATCTGGATATCCCTGGTGTTTGTTGGTCTGGATGACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTGCCATCTGGATATCCCTGGTGTTTGTTGGTCTGGATGACTG  450

seq1  TATGGAGTCAAGTGATTCTCTTGTAGGAATTATGTTTATCACAGAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGTCAAGTGATTCTCTTGTAGGAATTATGTTTATCACAGAAATGA  500

seq1  CAAGAGATGATAACCACAGGAGAATTC  527
      |||||||||||||||||||||||||||
seq2  CAAGAGATGATAACCACAGGAGAATTC  527

seq1: chr1_17352523_17353252
seq2: B6Ng01-101O01.g_71_803

seq1  GAATTCTGTGCTAAAGTATCTATTTACAGGATCCAGACAAAATGACCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTAAAGTATCTATTTACAGGATCCAGACAAAATGACCCAT  50

seq1  TGTCCTAGGTATTCCCAAAGGCTATTTAAGACCTTATATCTGAGGACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAGGTATTCCCAAAGGCTATTTAAGACCTTATATCTGAGGACAAT  100

seq1  AGGAAATATTGGGTAAAAGCAGATGTTAAGAAGTACCCTTTTCTAATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGAAATATTGGGTAAAAGCAGATGTTAAGAAGTACCCTTTTCTATTAGC  150

seq1  TATATCTGGGTTGCTATGGTTTGGACATGGCTTGAGTATTTCCTGTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGGGTTGCTATGGTTTGGACATGGCTTGAGTATTTCCTGTGGTT  200

seq1  CATACCTTAGTCATTACTGTTTTGTCAGGGGGTAAGAGCAACTTTCAGAG  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  CATACCTTATTCATTACTGTTTTGTCAGGGGGTAAGAGCAACTTTCAGAT  250

seq1  ATAGAAACTAGTAAAAAGCAGTCATGTCCTTTTGGGAGCCAATAGCTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACTAGTAAAAAGCAGTCATGTCCTTTTGGGAGCCAATAGCTAGA  300

seq1  GCACAGAGAGCAGGGTGCTAAACCCTGTTGTCAATATTTTTAGATCTAAA  350
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCACATAGAGCAGGGTGCTTAACCCTGTTGTCAATATTTTTAGATCTAAA  350

seq1  ACAAGAATGAAAATAAGCCATCTGGTATTGGAGTTCAGGCTCTGAATGTT  400
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  ACAAGAATGAAAATAATCCTTCTGGTATTGGAGTTCAGGCTCTGAATGTT  400

seq1  TTATATAAATACTTGTGTTTGAATAATAGCAAGCAATAAACCTGGGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAATACTTGTGTTTGAATAATAGCAAGCAATAAACCTGGGCTGA  450

seq1  GGGACACTCTTCTAGACCTGTATATTCATCGTACTGACCCTCACCTTAGT  500
      |||||| ||||||  ||||||||||||||| ||||||||||||||||| |
seq2  GGGACATTCTTCTTTACCTGTATATTCATCTTACTGACCCTCACCTTA-T  499

seq1  CAATGCCAAACATTATACATGACAAAGTATTTATTCTTTGACCAAATGCA  550
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  CAATGCCAAATATTATACATGACAAAGTATTTATTCTTTGACC-AATGCA  548

seq1  GAAGGTATCTCACAGATAC-CTCCTCTTATTACTACTGGAGACGCTTAGA  599
       || |||||||||||||||  | ||||||||||||||||||||| ||| |
seq2  TAATGTATCTCACAGATACTTTTCTCTTATTACTACTGGAGACGTTTATA  598

seq1  GTTTTCATAAGGAATA-GATTCCTGGATTTTCCTACAAAATTCAACACG-  647
      |||||||||| |||||   |||||||||||||||||||||||| | ||| 
seq2  GTTTTCATAATGAATATTTTTCCTGGATTTTCCTACAAAATTCTATACGT  648

seq1  TCCTAGAAGTAAGTCCTC-TTCCTTTTGAATCTGTTTCTAGTAAAAC-TT  695
      | |||||| ||||||||| ||||||||||||||| ||||  |||||| ||
seq2  TTCTAGAATTAAGTCCTCTTTCCTTTTGAATCTG-TTCTTTTAAAACTTT  697

seq1  CTCAGTGA-TTTCTGAGTTCTCTGCTGAAAATGGAA  730
      |||||||| |||||||||| |||||| |||||||||
seq2  CTCAGTGATTTTCTGAGTTTTCTGCTTAAAATGGAA  733