BAC Information

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BAC

Clone NameB6Ng01-102A17
Chromosome1 (Build37)
Map Location 138,352,006 - 138,482,782
singlet/doubletdoublet
Overlap geneKif14
Upstream geneNav1, EG215714, LOC623327, Csrp1, Phlda3, Tnni1, Lad1, Tnnt2, LOC100042477, Pkp1, 9830123M21Rik, Tmem9, Ascl5, Cacna1s, Kif21b, 2310006M14Rik, 5730559C18Rik, LOC100042513, Gpr25, Camsap1l1, 9230116N13Rik, Ddx59
Downstream geneZfp281, LOC667686, EG623818, Nr5a2, Rnu7-ps3, LOC100042567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102A17.bB6Ng01-102A17.g
ACCDH911049DH911050
length1,029137
definitionDH911049|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A17, 5' end.DH911050|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,481,752 - 138,482,782)(138,352,006 - 138,352,142)
sequence
gaattcagtctgtagcccaggctgagccctctatgtctacaccgcagcac
cggttatggggtgccatagtgtattctcatgtttctgtttcacctgctga
gtatcagcccagcctctgataaccattttagatggtgctgtgtctacttc
tcttcgacatttattccctcaaactatatccagtaaatgtctatcatgca
gggctggagagatgacccagaaattaagaacaccggctgatcttccagag
gacctgggttgtactcctagcacccacatgatggctcacaaccatctgta
actccagttccaggggatccaacaccctgttctggcctctgtgggtacca
ggcacacaagtagcacacagacatacatacctacaggtaagatacccaaa
cacatagaactaaaataaacaaacaagctgtaccttaggacccccatgca
ttggcagtgattgtgaatagtgcctcccaaatgctaggggttaaatgtgt
gtgccattacacccagctaacgcattttttaacatttacttttttttttg
gtttttcgagacagggtttctctgtgtagccctggctgtcctggaactca
ctttgtagaccaggctggcctcaaactcagaaatccgcctgcctctgcct
cccaagtgctgggattaaaggcgtgcaccaccacgcccagctttaacatt
tacttttaggggccacgtgtgccccagaatgcagaagtcagaggacaact
ggtaggaattggttctctcaggtcgtcagcgttggctgtatgcaagtgac
cttacccactgacccgcccaagtaaacctttttattgaaagacttcatat
aggtgaactataaatagtactttccatgtaaaattttaattgtggggtca
gcaagatggctcagtgggtaaaaaaaatacttgtcccacaaacctgacaa
tctgagtttgatcagaatccacaatggaagagagaaccaactcctgaaat
tgtcctctgacctctacacaggacacgct
tgcctcctgccctgccactggactctgcttgtcttatgattagctacata
cactgtgaacccatgtcccaagatctggcttttatttcatatgcaacaag
agaaggaagacggggaggagggagaggaggaagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_138481752_138482782
seq2: B6Ng01-102A17.b_47_1075 (reverse)

seq1  AGCGTGTGCCTGTGTAGAGGTCAGAGGACAATTTCAGGAGTTGGTTCTCT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGT-CCTGTGTAGAGGTCAGAGGACAATTTCAGGAGTTGGTTCTCT  49

seq1  CCTTCCATTGTGGATTCTGATCAAACTCAGATTGTCAGGTTTGTGGGACA  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTTCCATTGTGGATTCTGATCAAACTCAGATTGTCAGGTTTGTGGGACA  98

seq1  AGTATTTTTTTTACCCACTGAGCCATCTTGCTGACCCCACAATTAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTTTTACCCACTGAGCCATCTTGCTGACCCCACAATTAAAATT  148

seq1  TTACATGGAAAGTACTATTTATAGTTCACCTATATGAAGTCTTTCAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGAAAGTACTATTTATAGTTCACCTATATGAAGTCTTTCAATAA  198

seq1  AAAGGTTTACTTGGGCGGGTCAGTGGGTAAGGTCACTTGCATACAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTTACTTGGGCGGGTCAGTGGGTAAGGTCACTTGCATACAGCCAA  248

seq1  CGCTGACGACCTGAGAGAACCAATTCCTACCAGTTGTCCTCTGACTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGACGACCTGAGAGAACCAATTCCTACCAGTTGTCCTCTGACTTCTG  298

seq1  CATTCTGGGGCACACGTGGCCCCTAAAAGTAAATGTTAAAGCTGGGCGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGGGCACACGTGGCCCCTAAAAGTAAATGTTAAAGCTGGGCGTG  348

seq1  GTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATT  398

seq1  TCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAG  448

seq1  GGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAGTAAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAGTAAATGT  498

seq1  TAAAAAATGCGTTAGCTGGGTGTAATGGCACACACATTTAACCCCTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATGCGTTAGCTGGGTGTAATGGCACACACATTTAACCCCTAGCA  548

seq1  TTTGGGAGGCACTATTCACAATCACTGCCAATGCATGGGGGTCCTAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAGGCACTATTCACAATCACTGCCAATGCATGGGGGTCCTAAGGT  598

seq1  ACAGCTTGTTTGTTTATTTTAGTTCTATGTGTTTGGGTATCTTACCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTGTTTGTTTATTTTAGTTCTATGTGTTTGGGTATCTTACCTGTA  648

seq1  GGTATGTATGTCTGTGTGCTACTTGTGTGCCTGGTACCCACAGAGGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTATGTCTGTGTGCTACTTGTGTGCCTGGTACCCACAGAGGCCAG  698

seq1  AACAGGGTGTTGGATCCCCTGGAACTGGAGTTACAGATGGTTGTGAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGTGTTGGATCCCCTGGAACTGGAGTTACAGATGGTTGTGAGCCA  748

seq1  TCATGTGGGTGCTAGGAGTACAACCCAGGTCCTCTGGAAGATCAGCCGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGGTGCTAGGAGTACAACCCAGGTCCTCTGGAAGATCAGCCGGT  798

seq1  GTTCTTAATTTCTGGGTCATCTCTCCAGCCCTGCATGATAGACATTTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAATTTCTGGGTCATCTCTCCAGCCCTGCATGATAGACATTTACT  848

seq1  GGATATAGTTTGAGGGAATAAATGTCGAAGAGAAGTAGACACAGCACCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAGTTTGAGGGAATAAATGTCGAAGAGAAGTAGACACAGCACCAT  898

seq1  CTAAAATGGTTATCAGAGGCTGGGCTGATACTCAGCAGGTGAAACAGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGGTTATCAGAGGCTGGGCTGATACTCAGCAGGTGAAACAGAAA  948

seq1  CATGAGAATACACTATGGCACCCCATAACCGGTGCTGCGGTGTAGACATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAATACACTATGGCACCCCATAACCGGTGCTGCGGTGTAGACATA  998

seq1  GAGGGCTCAGCCTGGGCTACAGACTGAATTC  1031
      |||||||||||||||||||||||||||||||
seq2  GAGGGCTCAGCCTGGGCTACAGACTGAATTC  1029

seq1: chr1_138352006_138352142
seq2: B6Ng01-102A17.g_72_208

seq1  TGCCTCCTGCCCTGCCACTGGACTCTGCTTGTCTTATGATTAGCTACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGCCCTGCCACTGGACTCTGCTTGTCTTATGATTAGCTACATA  50

seq1  CACTGTGAACCCATGTCCCAAGATCTGGCTTTTATTTCATATGCAACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGAACCCATGTCCCAAGATCTGGCTTTTATTTCATATGCAACAAG  100

seq1  AGAAGGAAGACGGGGAGGAGGGAGAGGAGGAAGAGAA  137
      |||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAGACGGGGAGGAGGGAGAGGAGGAAGAGAA  137