BAC Information

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BAC

Clone NameB6Ng01-102J22
Chromosome1 (Build37)
Map Location 32,439,930 - 32,541,696
singlet/doubletdoublet
Overlap geneKhdrbs2
Upstream geneLOC624275, LOC666056, LOC100041238
Downstream geneEG408191, EG633498, LOC213711, LOC100040828, EG666108, Prim2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102J22.bB6Ng01-102J22.g
ACCDH911456DH911457
length9421,129
definitionDH911456|Mus musculus domesticus DNA, BAC clone: B6Ng01-102J22, 5' end.DH911457|Mus musculus domesticus DNA, BAC clone: B6Ng01-102J22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,541,096 - 32,541,696)(32,439,930 - 32,441,049)
sequence
gaattcatcttatataaaatgtgtgtttagtaaatgataaactgtttata
aatatatgaagaatgataaaattgctgcttacagaacagtcttggagttt
gctttctctgttcccccagacccaatctcccaatcttatcccttggtgca
aggaacaccagctgcatccttccttcacctctgttcatgttgcccagaaa
tcccacaagtctttttctcttaacctccctttcccaacttctttctttat
cccagacccaactccagcaggcaacccctgctaacctaagagcctttact
cccagtgaaataagcaggctaaagttagacctaaacctctcccactgctg
ctgcggaccaattcccccaagtctggtaccaatatggagcccaatacgga
gcttatgaactctttggtgtaagaaggtattgcgcaggttaccaaaagag
aaatgtcgatgccaacacttctacacaccttttgaattataatctgtcct
tgctacaccatacactaaggcaatgttggcacagaacttgtgggaataac
caaccagtgtctgaatttccacttcaagagaaggaacccatacctgacat
tgcttgagtaaccaagaaccagaggctaaacagctcagacacaggataaa
actagatgctattggtctaaaaaacatcaataaaatgaatcctaacgata
ttctgctatactcatagattggcaccttatccagttatcaccaaagaggc
ttcctctggcagcagatgggaaaagatgcagaggaaagaaaagaactgga
taaaaaaaggaaaagaaaagaaagcaaaaaacggattaattttaatttgg
gagatattttatgagagctgtttacatccatggttgtaggagatggggaa
cttttctaacagaaggacccaaagtaattgcagtatttcaaa
gaattcaacctttctatttcctactattgtgaaatgtgctgcaatgaaaa
ataggagtggaaatatctcttccttcacatactgattttattcttattga
atatatatccagaattttagcttccatccattaattagttcatgaattgg
ttatttttggattttgtgtgttttatatttatgtttgtatataacatgag
catgcacacatagatgtgtatgaatatagaatatagaggtcagaaaataa
tacagaggaccttcctttgttcctcctcaccttcattttgttaagagaac
tcattgaacccagagctcattgatcgaggtataagctgattgaccagtga
tcttcacagatcagttcttctccagcacctacaaccagcactgaggttgt
agatgggtagcattgtacttggcttttacatgggtgttggggatccagcc
tcacatcctcatgatcagaacagtcactttacctccttactcatggaact
ttatccccagtctgagttgtggtttcctgagaagtttctataactgactt
gatacctcagcatcaccaatgctctttgactaacaatttgttatctagtt
tgagttgttatgaattagatacaatatgggaaataatgaaagtattatca
tattaaaaacacacaggaataaatatattttttaaattggttattttatt
tatttacatttcaaatgttgcccctctcctcagtctccccccttcaaact
ccccagccattctgccctcccctttgcctctaagagggtgctttccccct
ccacctaccccactcctgcctcaccacaatagcatccccctttgctgagg
cagcaagcctccacaggaccaagtccccccccccccttgcgttaatgcca
gataaggcaatgctgtgctacatataatagctggaggcatggaacccatc
ctttatcttttgggttgatgttaatctctgggagctctgggatttccagt
tagttgataattgctgttcttcctgagggatatgcaacctctttcagctc
tgtaagtccttcccctaacctcctcccactgggggtccatgtttgggctt
gtgagtatctgctatcttgtattaattag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32541096_32541696
seq2: B6Ng01-102J22.b_44_644 (reverse)

seq1  AATGTCAGGTATGGGTTCCTTCTCTTGAAGTGGAAATTCAGACACTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGGTATGGGTTCCTTCTCTTGAAGTGGAAATTCAGACACTGGTT  50

seq1  GGTTATTCCCACAAGTTCTGTGCCAACATTGCCTTAGTGTATGGTGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTCCCACAAGTTCTGTGCCAACATTGCCTTAGTGTATGGTGTAGC  100

seq1  AAGGACAGATTATAATTCAAAAGGTGTGTAGAAGTGTTGGCATCGACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGATTATAATTCAAAAGGTGTGTAGAAGTGTTGGCATCGACATT  150

seq1  TCTCTTTTGGTAACCTGCGCAATACCTTCTTACACCAAAGAGTTCATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTGGTAACCTGCGCAATACCTTCTTACACCAAAGAGTTCATAAG  200

seq1  CTCCGTATTGGGCTCCATATTGGTACCAGACTTGGGGGAATTGGTCCGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTATTGGGCTCCATATTGGTACCAGACTTGGGGGAATTGGTCCGCA  250

seq1  GCAGCAGTGGGAGAGGTTTAGGTCTAACTTTAGCCTGCTTATTTCACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGTGGGAGAGGTTTAGGTCTAACTTTAGCCTGCTTATTTCACTGG  300

seq1  GAGTAAAGGCTCTTAGGTTAGCAGGGGTTGCCTGCTGGAGTTGGGTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGGCTCTTAGGTTAGCAGGGGTTGCCTGCTGGAGTTGGGTCTGG  350

seq1  GATAAAGAAAGAAGTTGGGAAAGGGAGGTTAAGAGAAAAAGACTTGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGAAAGAAGTTGGGAAAGGGAGGTTAAGAGAAAAAGACTTGTGGG  400

seq1  ATTTCTGGGCAACATGAACAGAGGTGAAGGAAGGATGCAGCTGGTGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGGCAACATGAACAGAGGTGAAGGAAGGATGCAGCTGGTGTTCC  450

seq1  TTGCACCAAGGGATAAGATTGGGAGATTGGGTCTGGGGGAACAGAGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCAAGGGATAAGATTGGGAGATTGGGTCTGGGGGAACAGAGAAAG  500

seq1  CAAACTCCAAGACTGTTCTGTAAGCAGCAATTTTATCATTCTTCATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCCAAGACTGTTCTGTAAGCAGCAATTTTATCATTCTTCATATAT  550

seq1  TTATAAACAGTTTATCATTTACTAAACACACATTTTATATAAGATGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACAGTTTATCATTTACTAAACACACATTTTATATAAGATGAATT  600

seq1  C  601
      |
seq2  C  601

seq1: chr1_32439930_32441049
seq2: B6Ng01-102J22.g_67_1195

seq1  GAATTCAACCTTTCTATTTCCTACTATTGTGAAATGTGCTGCAATGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTTTCTATTTCCTACTATTGTGAAATGTGCTGCAATGAAAA  50

seq1  ATAGGAGTGGAAATATCTCTTCCTTCACATACTGATTTTATTCTTATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGTGGAAATATCTCTTCCTTCACATACTGATTTTATTCTTATTGA  100

seq1  ATATATATCCAGAATTTTAGCTTCCATCCATTAATTAGTTCATGAATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCCAGAATTTTAGCTTCCATCCATTAATTAGTTCATGAATTGG  150

seq1  TTATTTTTGGATTTTGTGTGTTTTATATTTATGTTTGTATATAACATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGGATTTTGTGTGTTTTATATTTATGTTTGTATATAACATGAG  200

seq1  CATGCACACATAGATGTGTATGAATATAGAATATAGAGGTCAGAAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACACATAGATGTGTATGAATATAGAATATAGAGGTCAGAAAATAA  250

seq1  TACAGAGGACCTTCCTTTGTTCCTCCTCACCTTCATTTTGTTAAGAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGACCTTCCTTTGTTCCTCCTCACCTTCATTTTGTTAAGAGAAC  300

seq1  TCATTGAACCCAGAGCTCATTGATCGAGGTATAAGCTGATTGACCAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAACCCAGAGCTCATTGATCGAGGTATAAGCTGATTGACCAGTGA  350

seq1  TCTTCACAGATCAGTTCTTCTCCAGCACCTACAACCAGCACTGAGGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACAGATCAGTTCTTCTCCAGCACCTACAACCAGCACTGAGGTTGT  400

seq1  AGATGGGTAGCATTGTACTTGGCTTTTACATGGGTGTTGGGGATCCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGTAGCATTGTACTTGGCTTTTACATGGGTGTTGGGGATCCAGCC  450

seq1  TCACATCCTCATGATCAGAACAGTCACTTTACCTCCTTACTCATGGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCTCATGATCAGAACAGTCACTTTACCTCCTTACTCATGGAACT  500

seq1  TTATCCCCAGTCTGAGTTGTGGTTTCCTGAGAAGTTTCTATAACTGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCCAGTCTGAGTTGTGGTTTCCTGAGAAGTTTCTATAACTGACTT  550

seq1  GATACCTCAGCATCACCAATGCTCTTTGACTAACAATTTGTTATCTAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTCAGCATCACCAATGCTCTTTGACTAACAATTTGTTATCTAGTT  600

seq1  TGAGTTGTTATGAATTAGATACAATATGGGAAATAATGAAAGTATTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTTATGAATTAGATACAATATGGGAAATAATGAAAGTATTATCA  650

seq1  TATTAAAAACACACAGGAATAAATATATTTTTTAAATTGGTTATTTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAACACACAGGAATAAATATATTTTTTAAATTGGTTATTTTATT  700

seq1  TATTTACATTTCAAATGTTGCCCCTCTCCTCAGTCTCCCCCCTTCAAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACATTTCAAATGTTGCCCCTCTCCTCAGTCTCCCCCCTTCAAACT  750

seq1  CCCCAGCCATTCTGCCCTCCCCTTTGCCTCTAAGAGGGTGCTTTCCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCATTCTGCCCTCCCCTTTGCCTCTAAGAGGGTGCTTTCCCCCT  800

seq1  CCACCTA-CCCACTCCTGCCTCACCACAATAGCATCCCCCTTTGCTGAGG  849
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTACCCCACTCCTGCCTCACCACAATAGCATCCCCCTTTGCTGAGG  850

seq1  CAGCAAGCCTCCACAGGACCAAGTCCCCCCCCCCCCTTGCGTTAATGCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCCTCCACAGGACCAAGTCCCCCCCCCCCCTTGCGTTAATGCCA  900

seq1  GATAAGGCAATGCTGTGCTACATATAATAGCTGGAGGCATGG-ACCCATC  948
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATAAGGCAATGCTGTGCTACATATAATAGCTGGAGGCATGGAACCCATC  950

seq1  CTTTATACTTTTGGTTGATGTTTAATCTCTGGGAGCTCTGGGATTTCCAG  998
      ||||||  ||| |||||||| |||||||||||||||||||||||||||||
seq2  CTTTATCTTTTGGGTTGATG-TTAATCTCTGGGAGCTCTGGGATTTCCAG  999

seq1  TTAGTTGAT-ATTGCTGTTCTTCCTGAGGGAT-TGCAATCTCTTTCAGCT  1046
      ||||||||| |||||||||||||||||||||| ||||| |||||||||||
seq2  TTAGTTGATAATTGCTGTTCTTCCTGAGGGATATGCAACCTCTTTCAGCT  1049

seq1  CTGTTAGTCCTTCCCCTAA-CTCCT-CCACTGGGGTCCCATGTTTGG--C  1092
      |||| |||||||||||||| ||||| |||||||||  ||||||||||   
seq2  CTGTAAGTCCTTCCCCTAACCTCCTCCCACTGGGGGTCCATGTTTGGGCT  1099

seq1  TGTGAGTATCTGC-ATC-TGTATTAGTTAG  1120
      ||||||||||||| ||| ||||||| ||||
seq2  TGTGAGTATCTGCTATCTTGTATTAATTAG  1129