BAC Information

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BAC

Clone NameB6Ng01-103L15
Chromosome1 (Build37)
Map Location 144,420,982 - 144,421,977
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103L15.bB6Ng01-103L15.g
ACCDH912226DH912227
length316995
definitionDH912226|Mus musculus domesticus DNA, BAC clone: B6Ng01-103L15, 5' end.DH912227|Mus musculus domesticus DNA, BAC clone: B6Ng01-103L15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatccttcaaagacttagtaaagggactttctcagaagctct
gtgtctccagtctgtcccagaagctcttagctttgtagtccacactctca
cctgtgcagactcgtcttggaggagtccaggaaccaacatgtctcattca
gatgcttttattagtaagattcttatgtttgccttttcccatttggtaat
gttgaggaaaaggggggtggggaagaggggtaaaggaaaaggtgcctagc
atctggccagagctcctgtgctctgagctggcagactttggcagagcttt
ttttttttttccttaa

gaattcagtatcactaccaaatccattaaagatcttactaaaaatgtaca
attctgcctggcagtggcggcatatgcttttaatcccctttaatccagta
cttggaaggcagagtcaggcaaatttctgagtttgagccagcatggttta
cagagtgagttccaggacagtcaggactatacagaggaaccttgtctcaa
aaaaaaaaaaaaaacaaacaaacaaaaaaaaaacaaaaaacaaaaaacaa
aaaacaaacaaaaaaaaccaaccaaacaaaaaaaaacaaacaccccaaaa
caaaataaaaaacaaaacaaaacaacaaaaaacccaacatatcccccaaa
caaaaccaaaaccaaaaaagtacagttcttgtgtagtatcacatatcaag
aatcaggaagtacttaataaagaattgaggggtttattattgagatttct
tagtgggtaggagagatgtagataatgtgacagtgaatcaaagggaaaaa
ggcaaacttgtgagaaaattgttagatacgtttgaggaataaaagaaaga
gcaatattcattttagcatggccacacaagagaatctctttgggagctgt
taaaacacatgtgagtcttggctgtaccccagacccattaagtctaggtc
ctgcccgttagtacttttaaaatgttccccagacaatattcatgagaagc
caggtttgttcactggcagaaatctctgcttttcagagaaaatctgtaat
aaaatgtgactccttcttagactaagtaagctcccctgatctttttttat
gtcacagcatatcctttcatatatttggaagctactgtcattgacaacaa
tcaaatatattcacccacatatatatgacttgggctatggattaaatccc
atttcagaaataatttaattccaattatttttcactaatgcaacataatg
gtctacttgcaatggaacaattctcagcatagtttaattgatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144420982_144421977
seq2: B6Ng01-103L15.g_71_1065 (reverse)

seq1  CAAATCAATTAAACTATGCTGAGAATTG-TCCATTGCAAGTAAGACCA-T  48
      |||||||||||||||||||||||||||| |||||||||||| |||||| |
seq2  CAAATCAATTAAACTATGCTGAGAATTGTTCCATTGCAAGT-AGACCATT  49

seq1  ATGTAGCATTAGTGAAAAATAATTGG-ATATAATTATTTCTTGAAATGGG  97
      |||| ||||||||||||||||||||| ||  ||||||||| |||||||||
seq2  ATGTTGCATTAGTGAAAAATAATTGGAATTAAATTATTTC-TGAAATGGG  98

seq1  ATTTAATCCATAGCCCAAGTCATATATATGTGGGTGAAATATAATTTGAT  147
      |||||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  ATTTAATCCATAGCCCAAGTCATATATATGTGGGTG-AATAT-ATTTGAT  146

seq1  TGTTGTCAATGACAGTAGCTTCCCAAATATATGAAAGGATATGCTGTGAC  197
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTTGTCAATGACAGTAGCTT-CCAAATATATGAAAGGATATGCTGTGAC  195

seq1  ATAAAAAAAGATCAGGGGAGCTTACTTAGTCTAAGAAGGAGTCACATTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAAGATCAGGGGAGCTTACTTAGTCTAAGAAGGAGTCACATTTT  245

seq1  ATTACAGATTTTCTCTGAAAAGCAGAGATTTCTGCCAGTGAAC-AACCTG  296
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTACAGATTTTCTCTGAAAAGCAGAGATTTCTGCCAGTGAACAAACCTG  295

seq1  GCTTCTCATGAATATTGTCTGGGGAACATTTTAAAAGTACTAACGGGCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCATGAATATTGTCTGGGGAACATTTTAAAAGTACTAACGGGCAG  345

seq1  GACCTAGACTTAATGGGTCTGGGGTACAGCCAAGACTCACATGTGTTTTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGACTTAATGGGTCTGGGGTACAGCCAAGACTCACATGTGTTTTA  395

seq1  ACAGCTCCCAAAGAGATTCTCTTGTGTGGCCATGCTAAAATGAATATTGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCCCAAAGAGATTCTCTTGTGTGGCCATGCTAAAATGAATATTGC  445

seq1  TCTTTCTTTTATTCCTCAAACGTATCTAACAATTTTCTCACAAGTTTGCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTATTCCTCAAACGTATCTAACAATTTTCTCACAAGTTTGCC  495

seq1  TTTTTCCCTTTGATTCACTGTCACATTATCTACATCTCTCCTACCCACTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTTTGATTCACTGTCACATTATCTACATCTCTCCTACCCACTA  545

seq1  AGAAATCTCAATAATAAACCCCTCAATTCTTTATTAAGTACTTCCTGATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTCAATAATAAACCCCTCAATTCTTTATTAAGTACTTCCTGATT  595

seq1  CTTGATATGTGATACTACACAAGAACTGTACTTTTTTGGTTTTGGTTTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATATGTGATACTACACAAGAACTGTACTTTTTTGGTTTTGGTTTTG  645

seq1  TTTGGGGGATATGTTGGGTTTTTTGTTGTTTTGTTTTGTTTTTTATTTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGATATGTTGGGTTTTTTGTTGTTTTGTTTTGTTTTTTATTTTG  695

seq1  TTTTGGGGTGTTTGTTTTTTTTTGTTTGGTTGGTTTTTTTTGTTTGTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGTGTTTGTTTTTTTTTGTTTGGTTGGTTTTTTTTGTTTGTTTT  745

seq1  TTGTTTTTTGTTTTTTGTTTTTTTTTTGTTTGTTTGTTTTTTTTTTTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTGTTTTTTGTTTTTTTTTTGTTTGTTTGTTTTTTTTTTTTTT  795

seq1  TTGAGACAAGGTTCCTCTGTATAGTCCTGACTGTCCTGGAACTCACTCTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAAGGTTCCTCTGTATAGTCCTGACTGTCCTGGAACTCACTCTG  845

seq1  TAAACCATGCTGGCTCAAACTCAGAAATTTGCCTGACTCTGCCTTCCAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATGCTGGCTCAAACTCAGAAATTTGCCTGACTCTGCCTTCCAAG  895

seq1  TACTGGATTAAAGGGGATTAAAAGCATATGCCGCCACTGCCAGGCAGAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGATTAAAGGGGATTAAAAGCATATGCCGCCACTGCCAGGCAGAAT  945

seq1  TGTACATTTTTAGTAAGATCTTTAATGGATTTGGTAGTGATACTGAATTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTTTTAGTAAGATCTTTAATGGATTTGGTAGTGATACTGAATTC  995


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