BAC Information

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BAC

Clone NameB6Ng01-104F05
Chromosome1 (Build37)
Map Location 149,557,208 - 149,714,736
singlet/doubletdoublet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104F05.bB6Ng01-104F05.g
ACCDH912658DH912659
length4951,110
definitionDH912658|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F05, 5' end.DH912659|Mus musculus domesticus DNA, BAC clone: B6Ng01-104F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,557,208 - 149,557,708)(149,713,707 - 149,714,736)
sequence
tctgctagctgaatctgcccttacttcctcctcaatggggtgaaacctgt
atgtgtatcttgtttgtcagttttgactttggaatcagctcatgttctgg
aagcaatcagggaactggaggtgcctgtttatgaaactacagagcctgga
catttacttctgtcaaaacacaaaattaagactaaatcctagcaaacaca
gaagtggatgctcacagtcagctattgaatggatcacagggcccccaatg
ggggagctagagaaagtaaccaaggagctaaagggttctgcaaccctata
ggtggaacaacaatatgaaccacccagtatccccagagctcatgtctcta
gctgcatatgtatcaggagatggcctagtcagccatcagtggaaagagag
gctcattggtcgtgcaaactttatctgcctcagtacaggggaatgccagg
gccaaacagtgggagtggatgcgtgggggagtgggtgggggactt
gaattccaagtaccaaattgcagaaaatatctacagctggcaaaaccatg
cctttgctggagcttgaagcaaattatagtcagctgctgtgaacaattgg
aagtagccccatatctcagacctgggattaaaaagaaaattcattcttac
aatatttctgtaattttttaaagaaaccaaattctagaattctcactaca
caacataaatgcacaaaaatcaataaacttcctgtatgccaatgataaac
attctgagaaggcaaacaggcaataaattttactcagtccatcctaaaat
ttcttgtaaatatctagccaagaacctgaaacacttgaatctcatccatc
ctcagcccaagtaagaaaaattactaagggtctaacacacctactcatat
caaactatcaactacagaagagacctaaaaccaaattatgaagatagggt
tgtttgttgattttttaaagaatttgaagagaagtgagattagttaaaga
cccaagtgaggacaggtatttttcagagattttgtacaatgcaattaaac
aaaagtccctttctagccaaaccacaagtgaaagaatgatatgattgagc
tttaacaatagaattaaatatgctgacctgggtttagtcctgaaagtttc
tagactctgtacaatcttattctaagcccagaatgttttcagtctctgag
acttactgctgaaaaagctcactgttttgttgtagtaaaaattaattggg
ggattctaccccaactttgatcattatttcccaaataaagaacacaaatc
cttttaatttctaatgagccctatacattatagctgggtcgttatcaacc
ctgtaagttattttgtctacttttctgtcaataacttgccatgttctgcc
tgggctgcttttactctagctggacagcctttatgggcatgtactcatga
ttaacctagcccatggcatcttctcctctctttatccctattctgtcata
tgcctcagattctaaacctgggaatcaaagtcctctctacccagctactg
gctgtaggcatctttattccaacaatatctttaattaagaacaaagtcac
acgcatcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149557208_149557708
seq2: B6Ng01-104F05.b_45_545

seq1  GAATTCTCTGCTAGCTGAATCTGCCCTTACTTCCTCCTCAATGGGGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTAGCTGAATCTGCCCTTACTTCCTCCTCAATGGGGTGAA  50

seq1  ACCTGTATGTGTATCTTGTTTGTCAGTTTTGACTTTGGAATCAGCTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTATGTGTATCTTGTTTGTCAGTTTTGACTTTGGAATCAGCTCATG  100

seq1  TTCTGGAAGCAATCAGGGAACTGGAGGTGCCTGTTTATGAAACTACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAGCAATCAGGGAACTGGAGGTGCCTGTTTATGAAACTACAGAG  150

seq1  CCTGGACATTTACTTCTGTCAAAACACAAAATTAAGACTAAATCCTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACATTTACTTCTGTCAAAACACAAAATTAAGACTAAATCCTAGCA  200

seq1  AACACAGAAGTGGATGCTCACAGTCAGCTATTGAATGGATCACAGGGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAAGTGGATGCTCACAGTCAGCTATTGAATGGATCACAGGGCCC  250

seq1  CCAATGGGGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGTTCTGCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGTTCTGCAAC  300

seq1  CCTATAGGTGGAACAACAATATGAACCACCCAGTATCCCCAGAGCTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGGTGGAACAACAATATGAACCACCCAGTATCCCCAGAGCTCATG  350

seq1  TCTCTAGCTGCATATGTATCAGGAGATGGCCTAGTCAGCCATCAGTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCTGCATATGTATCAGGAGATGGCCTAGTCAGCCATCAGTGGAA  400

seq1  AGAGAGGCTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAAT  450

seq1  GCCAGGGCCAAACAGTGGGAGTGGATGCGTGGGGGAGTGGGTGGGGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCCAAACAGTGGGAGTGGATGCGTGGGGGAGTGGGTGGGGGACT  500

seq1  T  501
      |
seq2  T  501

seq1: chr1_149713707_149714736
seq2: B6Ng01-104F05.g_152_1176 (reverse)

seq1  AATGATGCTGTGTGACTTTTGTTCCTTAATTTAAAGATATTGTTGGAATA  50
      |||||||| ||||||| |||||| ||||| ||||||||||||||||||||
seq2  AATGATGC-GTGTGAC-TTTGTT-CTTAA-TTAAAGATATTGTTGGAATA  46

seq1  AAGATGCCTACAGCCAGTAGCTGGGTAGAGAGGACTTTGATTCCCAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCCTACAGCCAGTAGCTGGGTAGAGAGGACTTTGATTCCCAGGTT  96

seq1  TAGAATCTGAGGCATATGACAAGAATAGGGATAAAGAGAGGAGAAGATGC  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAGAATCTGAGGCATATGAC-AGAATAGGGATAAAGAGAGGAGAAGATGC  145

seq1  CATGGGCTAGGTTAATCATGAGTACATGGCCATAAAGGCTGTCCAGCTAG  200
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATGGGCTAGGTTAATCATGAGTACATGCCCATAAAGGCTGTCCAGCTAG  195

seq1  AGTAAAAGCAGCCCAGGCAGAACATGGCAAGTTATTGACAGAAAAGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGCAGCCCAGGCAGAACATGGCAAGTTATTGACAGAAAAGTAGA  245

seq1  CAAAATAACTTACAGGGTTGATAACGACCCAGCTATAATGTATAGGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACTTACAGGGTTGATAACGACCCAGCTATAATGTATAGGGCTC  295

seq1  ATTAGAAATTAAAAGGATTTGTGTTCTTTATTTGGGAAATAATGATCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAATTAAAAGGATTTGTGTTCTTTATTTGGGAAATAATGATCAAA  345

seq1  GTTGGGGTAGAATCCCCCAATTAATTTTTACTACAACAAAACAGTGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGTAGAATCCCCCAATTAATTTTTACTACAACAAAACAGTGAGCT  395

seq1  TTTTCAGCAGTAAGTCTCAGAGACTGAAAACATTCTGGGCTTAGAATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGCAGTAAGTCTCAGAGACTGAAAACATTCTGGGCTTAGAATAAG  445

seq1  ATTGTACAGAGTCTAGAAACTTTCAGGACTAAACCCAGGTCAGCATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACAGAGTCTAGAAACTTTCAGGACTAAACCCAGGTCAGCATATTT  495

seq1  AATTCTATTGTTAAAGCTCAATCATATCATTCTTTCACTTGTGGTTTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATTGTTAAAGCTCAATCATATCATTCTTTCACTTGTGGTTTGGC  545

seq1  TAGAAAGGGACTTTTGTTTAATTGCATTGTACAAAATCTCTGAAAAATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGGGACTTTTGTTTAATTGCATTGTACAAAATCTCTGAAAAATAC  595

seq1  CTGTCCTCACTTGGGTCTTTAACTAATCTCACTTCTCTTCAAATTCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCACTTGGGTCTTTAACTAATCTCACTTCTCTTCAAATTCTTTA  645

seq1  AAAAATCAACAAACAACCCTATCTTCATAATTTGGTTTTAGGTCTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAACAAACAACCCTATCTTCATAATTTGGTTTTAGGTCTCTTCT  695

seq1  GTAGTTGATAGTTTGATATGAGTAGGTGTGTTAGACCCTTAGTAATTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGATAGTTTGATATGAGTAGGTGTGTTAGACCCTTAGTAATTTTT  745

seq1  CTTACTTGGGCTGAGGATGGATGAGATTCAAGTGTTTCAGGTTCTTGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTGGGCTGAGGATGGATGAGATTCAAGTGTTTCAGGTTCTTGGCT  795

seq1  AGATATTTACAAGAAATTTTAGGATGGACTGAGTAAAATTTATTGCCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTACAAGAAATTTTAGGATGGACTGAGTAAAATTTATTGCCTGT  845

seq1  TTGCCTTCTCAGAATGTTTATCATTGGCATACAGGAAGTTTATTGATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCTCAGAATGTTTATCATTGGCATACAGGAAGTTTATTGATTTT  895

seq1  TGTGCATTTATGTTGTGTAGTGAGAATTCTAGAATTTGGTTTCTTTAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTTATGTTGTGTAGTGAGAATTCTAGAATTTGGTTTCTTTAAAA  945

seq1  AATTACAGAAATATTGTAAGAATGAATTTTCTTTTTAATCCCAGGTCTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGAAATATTGTAAGAATGAATTTTCTTTTTAATCCCAGGTCTGA  995

seq1  GATATGGGGCTACTTCCAATTGTTCACAGC  1030
      ||||||||||||||||||||||||||||||
seq2  GATATGGGGCTACTTCCAATTGTTCACAGC  1025