BAC Information

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BAC

Clone NameB6Ng01-104H24
Chromosome1 (Build37)
Map Location 132,363,418 - 132,363,888
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740, Daf2, Cd55
Downstream geneZp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104H24.bB6Ng01-104H24.g
ACCDH912781DH912782
length1,029465
definitionDH912781|Mus musculus domesticus DNA, BAC clone: B6Ng01-104H24, 5' end.DH912782|Mus musculus domesticus DNA, BAC clone: B6Ng01-104H24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctccttctgctccatgcttgccttgatgctgctatgctcc
tgccttggtgataatggactgaacctgtaagccagcctcaattaaatgtt
gtccttataagagtttcattgatcatggtgtctgttcacagcagtaaaat
cctaactaagacagaagttggtatcaggagtaggatattgctgtgacagg
cctgaccatgcttttctttggaagagtgtggattttgggactttgaattt
ggaaagtggtagaatgctttaagtgggggcttaatagactatcctagcag
gaagaaggaatactttgttgctggcagtgatttgagctatgcagatctgg
ctcaagaggtttccatagagaagagctttagtatgcggcctagagaccat
ttttctgttattttggtgaagaatgtggctgctttttgcccttgtctgaa
gagtctacctgagggtaaggtaaagggatttatactaattcattgacaaa
ggaagtctcaaaaacaaaaacaaacaaacaaaaacccagaagagaccttg
ttctctggtgaagtctcatgaaaagcattttgaacaagcataacaagctg
agaaagaaaaatacaatatatatggtttaagtattaaagaggcaccagaa
agtagaatagagctgaatcctatattctaggatacaacatattaagggaa
tgtgactttggggcaagattgtacccaactaaatttagatcccagcatgg
tggttggtacacacgtttaattccaggaaataatgccaagcagatctctg
agttcaagtccagcctgaaacagagccaagttctaggtgaagaaaagatt
aaatccaggcatgatggtacatacctttaatgtatgtatgcaggagagag
ggatgcagatctctgagttcaaggtcatatacagagcaagttccaggaca
gccaagcttaaggcattggaatgagttggaaaacagaaactggtgataat
gtaatagacagtgtgtgtgttgtgtgagg
agggatgtaaaagaaatttaaccatataaccagcttagagtctggaggtc
tcaggctgttccacctcccctctctgatccaggacatctcccagttgaca
aggtcaaaacaggaggaggatttttaagctctaccagatctgtcaggtcc
ccctacaaggaacagcctagatgccttcctagtagcctacagtatttccc
ccctcaccgccccccctccttgcctccagggtcctgaaacagccaacaga
aacaaaagcaaacctttggcttgagaacccttggtttcctttgtcttaca
gctgcaaatctaggcagttctgccctgaagattaaatgagacctgttttc
taaaaattaatggaaacagactagcaccgccacttcttgtttattgagaa
aaaaaattctcatccacattcaggtcctctttttgtgtgcttggaggggc
gggggtggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132363418_132363888
seq2: B6Ng01-104H24.g_68_538

seq1  GAATTCAGGGATGTAAAAGAAATTTAACCATATAACCAGCTTAGAGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGATGTAAAAGAAATTTAACCATATAACCAGCTTAGAGTCTG  50

seq1  GAGGTCTCAGGCTGTTCCACCTCCCCTCTCTGATCCAGGACATCTCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCAGGCTGTTCCACCTCCCCTCTCTGATCCAGGACATCTCCCAG  100

seq1  TTGACAAGGTCAAAACAGGAGGAGGATTTTTAAGCTCTACCAGATCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGGTCAAAACAGGAGGAGGATTTTTAAGCTCTACCAGATCTGTC  150

seq1  AGGTCCCCCTACAAGGAACAGCCTAGATGCCTTCCTAGTAGCCTACAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCCCTACAAGGAACAGCCTAGATGCCTTCCTAGTAGCCTACAGTA  200

seq1  TTTCCCCCCTCACCGCCCCCCCTCCTTGCCTCCAGGGTCCTGAAACAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCCTCACCGCCCCCCCTCCTTGCCTCCAGGGTCCTGAAACAGCC  250

seq1  AACAGAAACAAAAGCAAACCTTTGGCTTGAGAACCCTTGGTTTCCTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAACAAAAGCAAACCTTTGGCTTGAGAACCCTTGGTTTCCTTTGT  300

seq1  CTTACAGCTGCAAATCTAGGCAGTTCTGCCCTGAAGATTAAATGAGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGCTGCAAATCTAGGCAGTTCTGCCCTGAAGATTAAATGAGACCT  350

seq1  GTTTTCTAAAAATTAATGGAAACAGACTAGCACCGCCACTTCTTGTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAAAAATTAATGGAAACAGACTAGCACCGCCACTTCTTGTTTAT  400

seq1  TGAGAAAAAAAATTCTCATCCACATTCAGGTCCTCTTTTTGTGTGCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAAAAATTCTCATCCACATTCAGGTCCTCTTTTTGTGTGCTTGG  450

seq1  AGGGGCGGGGGTGGGGGGGGG  471
      |||||||||||||||||||||
seq2  AGGGGCGGGGGTGGGGGGGGG  471