BAC Information

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BAC

Clone NameB6Ng01-104J22
Chromosome1 (Build37)
Map Location 173,279,847 - 173,280,282
singlet/doubletsinglet
Overlap genePfdn2
Upstream geneNos1ap, LOC100040002, LOC640532, Olfml2b, Atf6, Dusp12, Fcrlb, Fcrla, LOC100040778, Fcgr2b, Fcgr4, Fcgr3, 1700009P17Rik, Sdhc, Mpz, Pcp4l1, Nr1i3, Tomm40l, Apoa2, Fcer1g, Ndufs2, Adamts4, B4galt3, Ppox, Usp21, Ufc1, EG622236, Dedd, Nit1
Downstream gene1190002J23Rik, Pvrl4, Arhgap30, Usf1, EG226654, F11r, Refbp2, Itlna, Cd244, Ly9, Slamf7, Cd48, LOC100041098, Slamf1, Cd84, Slamf6, Vangl2, LOC100040199, Nhlh1, Ncstn, Copa, Pex19, LOC100041219, Wdr42a, Pea15a, Casq1, Timm23p, Atp1a2, Igsf8, Kcnj9, Kcnj10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104J22.bB6Ng01-104J22.g
ACCDH912863DH912864
length1,058430
definitionDH912863|Mus musculus domesticus DNA, BAC clone: B6Ng01-104J22, 5' end.DH912864|Mus musculus domesticus DNA, BAC clone: B6Ng01-104J22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaggactagggggttgcatcgaccccccggtgtggccccctgga
cgctactggagaccactgaggaatcataacaggggccctgacccttagga
gtgtttcctcgcttaagggaaattaggtcccatgatgatgatggcttcca
gtatgcctgtccagtggtctcacatccccatttgccgcagtagccctctc
tcggccctccacaccctgttagcacagtatggccggggcaaacatagaaa
tcatatagtcttgtcctttttcttccccccggagagcggcaaccatctcc
aatatcgggttccgggtcatcccagttgtctccaactaaatcacacaagt
caaaatatagtttagggaaggtgtctgtcatcgtccccaggagggaggta
gcgttagctgtttgtcctgtcattaggttggtaactctccaagtgacatt
gaagacctggtgagggctgtcacgttgtaccgaggctcctgccctcacca
agatccccataactattagggggccccacgggttaatcttatctttaagg
ggttttgagaacgctggaccttccatgctgctccggccggaggagttgtc
gccgcctttacgtgagcggcgtgtatccacgcagagatgccgtcaacttt
gagagcggtgggggtggtcagcaggacggtgtagggtcctttccagcgag
gttccaagtttcttagtctggtgccggcgtacccacacggcgtcaccgac
acggaaggggtgtggtatcactggctgatctagctggtcccgataagcag
cggccagcggcttccagacctctcgttgtactgcttggagggcctgtaag
tgagcttggagagagggactattagttaactttgacatttcaggatcatg
aaaattgacaaggggcggggtgccccatacagaatttcatacggggtcag
tccatggggggcccggagtgttccgggcctcgttagagggctaatgggga
gtaggagtaccagtcctctagtgccagctgcaagcgttaattagtaagat
ctcttgga
tgtctttaagctgggtaatgtattctcggaaagaacagatttagatcttg
ttttatgaccaggtcatctggtcttctttttttgtttttggtttttcgag
tcagggtttctctgtatagccctggctgtcctggaactcactctgtagac
caggctggccttgaactcagaaatccacctacctctgactctcaagtgct
gggattaaaggcatgtgccaccactgcctgcctaagttcttgatacagga
gctcactaggtagaccagggtggcctcgaactcacaaagatccatctgcc
tctgcttcccaaatgccaagctttgatctttaaatcagagtgttaagcat
tcagcgttattgatcggggtttgcaaattactatgattttgttaaatgta
tttcttttctttttttggggggggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_173279847_173280282
seq2: B6Ng01-104J22.g_70_505

seq1  GAATTCTGTCTTTAAGCTGGGTAATGTATTCTCGGAAAGAACAGATTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTTTAAGCTGGGTAATGTATTCTCGGAAAGAACAGATTTAG  50

seq1  ATCTTGTTTTATGACCAGGTCATCTGGTCTTCTTTTTTTGTTTTTGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTTTATGACCAGGTCATCTGGTCTTCTTTTTTTGTTTTTGGTTT  100

seq1  TTCGAGTCAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGTCAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCT  150

seq1  GTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTACCTCTGACTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTACCTCTGACTCTCA  200

seq1  AGTGCTGGGATTAAAGGCATGTGCCACCACTGCCTGCCTAAGTTCTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGATTAAAGGCATGTGCCACCACTGCCTGCCTAAGTTCTTGAT  250

seq1  ACAGGAGCTCACTAGGTAGACCAGGGTGGCCTCGAACTCACAAAGATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGCTCACTAGGTAGACCAGGGTGGCCTCGAACTCACAAAGATCCA  300

seq1  TCTGCCTCTGCTTCCCAAATGCCAAGCTTTGATCTTTAAATCAGAGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTGCTTCCCAAATGCCAAGCTTTGATCTTTAAATCAGAGTGTT  350

seq1  AAGCATTCAGCGTTATTGATCGGGGTTTGCAAATTACTATGATTTTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTCAGCGTTATTGATCGGGGTTTGCAAATTACTATGATTTTGTTA  400

seq1  AATGTATTTCTTTTCTTTTTTTGGGGGGGGGGTGGG  436
      ||||||||||||||||||||||||||||||||||||
seq2  AATGTATTTCTTTTCTTTTTTTGGGGGGGGGGTGGG  436