BAC Information

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BAC

Clone NameB6Ng01-105B19
Chromosome1 (Build37)
Map Location 191,461,138 - 191,661,748
singlet/doubletdoublet
Overlap geneCenpf, Ptpn14, LOC100042438
Upstream geneUsh2a, Kctd3, Kcnk2, LOC100042424, LOC100039307
Downstream geneSmyd2, Prox1, LOC100039394, EG666975, Rps6kc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105B19.bB6Ng01-105B19.g
ACCDH913220DH913221
length1851,222
definitionDH913220|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B19, 5' end.DH913221|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(191,661,564 - 191,661,748)(191,461,138 - 191,462,370)
sequence
cttcaaaacaactgccaaaactctacaggcagtcctcaccctgtgccctg
ctgggaacagcacctgagggaatagaaccaaccctgacagggcttccggt
tctgacatctgtgtgtggcggtttcatttcagcagctcatgtacgtgcag
ggtgctcatttgtgacatgtgtgtgtgtgtggggg
gaattccaaaataaccaatgtcttaagcccctgaaaaagcagttagaagc
tgttgcagacttaatccagtaccccttgtagactcaaacaagtgtcctaa
attttccaggtctatacatctgggaaggtaacagtactgaagagacagat
tacttggaaccaaatgagaaaactcaaataaatcttgaacacaagcacac
ctgaggtccgggagattcttgagaaatccggctatgcttaaacttcagat
gttacccctctctgaagatgttccaccggagtcctgacaactgctgctaa
tgcaaatggccattttagttccagcacaaagaaaaggtctttccgccatg
ccatgcacgtcattgtgcagatgagaactggatgcccagagttctgaact
taatttgtttccccatattagtcagctagagtcttatctgtaacttagcc
actttacaagacactaaaatcaacaggctattcatgtaatatgtagtgta
agcccataacacatgctaccaactttaaataattctgatgataaaaacca
aagtgttagcccacttttaggacccaacttccatattcacaggcaaataa
ctgctatctctttaaacggtgggctaacttctaggctgtgaagtggaaac
ttctggtttctttggaaagtcagttatgtcaagtgatgttttgctggggc
acacaggtgaaaggatgttttcctaaagcagaaacatgaatgttttcctg
aagctcacacaagtgaaaggatgttctgctaaagcaaacattttttttgt
cgttgttgttgttggtttttttccaagacagggtttctctgtatatccct
ggctgtcctggactcactttgtagatgaggctggcctcgaactcagaatc
cgcctgtctctgcctcccaagtgctgggattaaaggcgtgcaaacatata
aaaggacacatgacgttaaaggaatataaataaaatccaacagacagtgg
atgacgcccgaatggtattggtaggccttgcaatgcttacttggccattc
ttttgtcaaaaccaaaaaccgtacccaaaaccatctgataggttccacgg
attctttgcacctttcttccaaatgcgtggcatgtaaggaaacgaaagtt
ctgatgtacctgaacgaaccatgtggagttacgtaagacgggcccatgag
aaggccctgcaagttttggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_191661564_191661748
seq2: B6Ng01-105B19.b_47_231 (reverse)

seq1  CCCCCACACACACACACATGTCACAAATGAGCACCCTGCACGTACATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACACACACACACATGTCACAAATGAGCACCCTGCACGTACATGAG  50

seq1  CTGCTGAAATGAAACCGCCACACACAGATGTCAGAACCGGAAGCCCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAAATGAAACCGCCACACACAGATGTCAGAACCGGAAGCCCTGTC  100

seq1  AGGGTTGGTTCTATTCCCTCAGGTGCTGTTCCCAGCAGGGCACAGGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGGTTCTATTCCCTCAGGTGCTGTTCCCAGCAGGGCACAGGGTGA  150

seq1  GGACTGCCTGTAGAGTTTTGGCAGTTGTTTTGAAG  185
      |||||||||||||||||||||||||||||||||||
seq2  GGACTGCCTGTAGAGTTTTGGCAGTTGTTTTGAAG  185

seq1: chr1_191461138_191462370
seq2: B6Ng01-105B19.g_66_1286

seq1  GAATTCCAAAATAACCAATGTCTTAAGCCCCTGAAAAAGCAGTTAGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAATAACCAATGTCTTAAGCCCCTGAAAAAGCAGTTAGAAGC  50

seq1  TGTTGCAGACTTAATCCAGTACCCCTTGTAGACTCAAACAAGTGTCCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCAGACTTAATCCAGTACCCCTTGTAGACTCAAACAAGTGTCCTAA  100

seq1  ATTTTCCAGGTCTATACATCTGGGAAGGTAACAGTACTGAAGAGACAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCAGGTCTATACATCTGGGAAGGTAACAGTACTGAAGAGACAGAT  150

seq1  TACTTGGAACCAAATGAGAAAACTCAAATAAATCTTGAACACAAGCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGAACCAAATGAGAAAACTCAAATAAATCTTGAACACAAGCACAC  200

seq1  CTGAGGTCCGGGAGATTCTTGAGAAATCCGGCTATGCTTAAACTTCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTCCGGGAGATTCTTGAGAAATCCGGCTATGCTTAAACTTCAGAT  250

seq1  GTTACCCCTCTCTGAAGATGTTCCACCGGAGTCCTGACAACTGCTGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCCTCTCTGAAGATGTTCCACCGGAGTCCTGACAACTGCTGCTAA  300

seq1  TGCAAATGGCCATTTTAGTTCCAGCACAAAGAAAAGGTCTTTCCGCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATGGCCATTTTAGTTCCAGCACAAAGAAAAGGTCTTTCCGCCATG  350

seq1  CCATGCACGTCATTGTGCAGATGAGAACTGGATGCCCAGAGTTCTGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCACGTCATTGTGCAGATGAGAACTGGATGCCCAGAGTTCTGAACT  400

seq1  TAATTTGTTTCCCCATATTAGTCAGCTAGAGTCTTATCTGTAACTTAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTTTCCCCATATTAGTCAGCTAGAGTCTTATCTGTAACTTAGCC  450

seq1  ACTTTACAAGACACTAAAATCAACAGGCTATTCATGTAATATGTAGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACAAGACACTAAAATCAACAGGCTATTCATGTAATATGTAGTGTA  500

seq1  AGCCCATAACACATGCTACCAACTTTAAATAATTCTGATGATAAAAACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATAACACATGCTACCAACTTTAAATAATTCTGATGATAAAAACCA  550

seq1  AAGTGTTAGCCCACTTTTAGGACCCAACTTCCATATTCACAGGCAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTAGCCCACTTTTAGGACCCAACTTCCATATTCACAGGCAAATAA  600

seq1  CTGCTATCTCTTTAAACGGTGGGCTAACTTCTAGGCTGTGAAGTGGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATCTCTTTAAACGGTGGGCTAACTTCTAGGCTGTGAAGTGGAAAC  650

seq1  TTCTGGTTTCTTTGGAAAGTCAGTTATGTCAAGTGATGTTTTGCTGGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTTCTTTGGAAAGTCAGTTATGTCAAGTGATGTTTTGCTGGGGC  700

seq1  ACACAGGTGAAAGGATGTTTTCCTAAAGCAGAAACATGAATGTTTTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTGAAAGGATGTTTTCCTAAAGCAGAAACATGAATGTTTTCCTG  750

seq1  AAGCTCACACAAGTGAAAGGATGTTCTGCTAAAGCAAACATTTTTTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCACACAAGTGAAAGGATGTTCTGCTAAAGCAAACATTTTTTTTGT  800

seq1  CGTTGTTGTTGTTGGTTTTTTTCCAAGACAGGGTTTCTCTGTATATCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTTGTTGTTGGTTTTTTTCCAAGACAGGGTTTCTCTGTATATCCCT  850

seq1  GGCTGTCCTGGACTCACTTTGTAGATGAGGCTGGCCTCGAACTCAGAAAT  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGCTGTCCTGGACTCACTTTGTAGATGAGGCTGGCCTCGAACTCAG-AAT  899

seq1  CCGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCAAACATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCAAACATAT  949

seq1  AAAAGGACACATGACGTTAAAAAGGAATATAAATAAAATCCAACAGACAG  1000
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  AAAAGGACACATGACGTT--AAAGGAATATAAATAAAATCCAACAGACAG  997

seq1  TGGATGACGCTCG-ATGGTATTGGTAGGCCTTGCCATTGCTTAC-TGGCC  1048
      |||||||||| || ||||||||||||||||||| || ||||||| |||||
seq2  TGGATGACGCCCGAATGGTATTGGTAGGCCTTG-CAATGCTTACTTGGCC  1046

seq1  A-TCTTTTGTCAAAAACCAAAAACGTACCAAAAACCATCTGATAGTGTTC  1097
      | ||||||||||||| | |||| |||||| ||||||||||||||| ||||
seq2  ATTCTTTTGTCAAAACCAAAAACCGTACCCAAAACCATCTGATAG-GTTC  1095

seq1  TAGCAGATTCTTGCCAC--TTCCT-CAGATGCTGGCCAATTGGCAGAGTG  1144
       | | |||||||  |||  ||| | || ||||  | ||  ||  ||   |
seq2  CA-CGGATTCTTTGCACCTTTCTTCCAAATGCGTGGCA--TGTAAG---G  1139

seq1  AAACGGAAGTTTCTGGATATGTCAGCTGAGACAGACTCATGTGGAGTTTT  1194
      ||||| ||| |||||   |||| | |||| || ||  |||||||||||  
seq2  AAACGAAAG-TTCTG---ATGT-ACCTGA-AC-GAACCATGTGGAGTTAC  1182

seq1  GCTGAGGCGCGGCCCATGGGAGGGCCCTG--ATGTTTGGAG  1233
      | | || || |||||||| || |||||||  |  |||||||
seq2  G-TAAGACG-GGCCCATGAGAAGGCCCTGCAAGTTTTGGAG  1221