BAC Information

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BAC

Clone NameB6Ng01-105F15
Chromosome1 (Build37)
Map Location 32,827,287 - 32,828,037
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041238, Khdrbs2, EG408191
Downstream geneEG633498, LOC213711, LOC100040828, EG666108, Prim2, 1700001G17Rik, Rab23, Bag2, Zfp451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105F15.bB6Ng01-105F15.g
ACCDH913398DH913399
length7541,178
definitionDH913398|Mus musculus domesticus DNA, BAC clone: B6Ng01-105F15, 5' end.DH913399|Mus musculus domesticus DNA, BAC clone: B6Ng01-105F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggtagcaaacaatggtggcaagttgggagaagaagaaaagccc
tagttagagcagcagacaaaaagaagacagagagagagagagacggagag
agagagagagagagacagagacagagacagagacagacagagagagagag
agagagagagagagagagtcctacgaccccacaaatacaaaaatggattc
ctcataaagatgtaaggcataagactggagttctgcactcagcacaacaa
gctgagctaagtggggtcccctgagttttctagcttatttgtagaaacca
tgccttcaaagggggtcttgctgtctgagcttgcagatatttctttatct
ccattcaacaaatgtgtctcctcctcactgtaccagtcatcccaggtcca
tataactattcctgatttagacagaagttcatctacatgaatccattagg
tgtaaaatgtcatgttcattacaggtgaaagggaaagagtttttatctaa
agtctctgggatgaaatctgagagggacatcataccatgtgtatttggat
ttttgaggataaagtgatgggtggaaaggtaccttggagccgagggttgc
ctgagtaccctgtattcacattctggggtgcataagcatctggagaagag
ttgctgcttaaacattcccacttaggatcttagttgtgactgaataaatc
acttgattgttttttgggtttaacccgtaatgaccacacacagagtttta
tacg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtatcgcggttcctca
gaaaattggacacagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaacgaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctatacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattaacccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgatataa
aaagatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatgaaag
gacccagatgtagctgtctcttgtgagactatggccggggcctagcaaca
caaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggaggagctagaaaatgtagccaaggagctaaatggatttgcaccctaat
agtgacacattagaactaaccagtatctcagaagctcttgacactagctg
catatgtatcaaaagatggccttagtcggccatcactgggaggaaggccc
atttgaatttgccaatcttttattggtccagtcaagggatgtgcagggcc
ataaagggtgatgtggtggtagtgagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32827287_32828037
seq2: B6Ng01-105F15.b_45_798

seq1  GAATTCTGGTAGCAAACAATGGTGGCAAGTTGGGAGAAGAAGAAAAGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTAGCAAACAATGGTGGCAAGTTGGGAGAAGAAGAAAAGCCC  50

seq1  TAGTTAGAGCAGCAGACAAAAAGAAGACAGAGAGAGAGAGAGACGGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGAGCAGCAGACAAAAAGAAGACAGAGAGAGAGAGAGACGGAGAG  100

seq1  AGAGAGAGAGAGAGACAGAGACAGAGACAGAGACAGACAGAGAGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGACAGAGACAGAGACAGAGACAGACAGAGAGAGAGAG  150

seq1  AGAGAGAGAGAGAGAGAGTCCTACGACCCCACAAATACAAAAATGGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGTCCTACGACCCCACAAATACAAAAATGGATTC  200

seq1  CTCATAAAGATGTAAGGCATAAGACTGGAGTTCTGCACTCAGCACAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAAGATGTAAGGCATAAGACTGGAGTTCTGCACTCAGCACAACAA  250

seq1  GCTGAGCTAAGTGGGGTCCCCTGAGTTTCCTAGCTTATTTGTAGAAACCA  300
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCTGAGCTAAGTGGGGTCCCCTGAGTTTTCTAGCTTATTTGTAGAAACCA  300

seq1  TGCCTTCAAAGGGGGTCTTGCTGTCTGAGCTTGCAGATATTTCTTTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCAAAGGGGGTCTTGCTGTCTGAGCTTGCAGATATTTCTTTATCT  350

seq1  CCATTCAACAAATGTGTCTCCTCCTCACTGTACCAGTCATCCCAGGTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAACAAATGTGTCTCCTCCTCACTGTACCAGTCATCCCAGGTCCA  400

seq1  TATAACTATTCCTGATTTAGACAGAAGTTCATCTACATGAATCCATGAGG  450
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TATAACTATTCCTGATTTAGACAGAAGTTCATCTACATGAATCCATTAGG  450

seq1  TGTAAAATGTCATGTGCATTACAGGTGAAAGGGAAAGAGTTTCTATCTAA  500
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  TGTAAAATGTCATGTTCATTACAGGTGAAAGGGAAAGAGTTTTTATCTAA  500

seq1  AGTCTCTGGGATGAAATCTGAGAGGGACATCATACCATGTGCATTTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGTCTCTGGGATGAAATCTGAGAGGGACATCATACCATGTGTATTTGGAT  550

seq1  TCTTGAGGATAAAGTGATGGGTGGAAAGGTACCTTGGAGCCGAGGGTTGC  600
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGATAAAGTGATGGGTGGAAAGGTACCTTGGAGCCGAGGGTTGC  600

seq1  CTGAGTACCCTGTATTCACATACTGGGGTGCAGAAGCATCTGGAGAAGAG  650
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  CTGAGTACCCTGTATTCACATTCTGGGGTGCATAAGCATCTGGAGAAGAG  650

seq1  GTGCTGCTTAAACATTCCCACTCAGGAGCTTAGTTGTGACTGAA-CAAGC  699
       ||||||||||||||||||||| |||| ||||||||||||||||  || |
seq2  TTGCTGCTTAAACATTCCCACTTAGGATCTTAGTTGTGACTGAATAAATC  700

seq1  ACTGGATTG-TTCTTGGGTTTAACCCGCAATGACCACACACAGAG-TCTA  747
      ||| ||||| || |||||||||||||| ||||||||||||||||| | ||
seq2  ACTTGATTGTTTTTTGGGTTTAACCCGTAATGACCACACACAGAGTTTTA  750

seq1  TACG  751
      ||||
seq2  TACG  754