BAC Information

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BAC

Clone NameB6Ng01-106H20
Chromosome1 (Build37)
Map Location 91,668,146 - 91,808,866
singlet/doubletdoublet
Overlap geneCentg2
Upstream geneLOC208347, Sh3bp4, LOC383542, EG665688
Downstream geneGbx2, Asb18, Iqca, Cxcr7, Cops8, Col6a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106H20.bB6Ng01-106H20.g
ACCDH914215DH914216
length511973
definitionDH914215|Mus musculus domesticus DNA, BAC clone: B6Ng01-106H20, 5' end.DH914216|Mus musculus domesticus DNA, BAC clone: B6Ng01-106H20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,668,146 - 91,668,662)(91,808,321 - 91,808,866)
sequence
ttccaagaaaatggaagccggcttccttttttttgggaaggtcacttcaa
ggccttgtcctcagtctgagctctacacagcttctcccaaaactgcacca
gcagtattgctgggctcaggagctcgctgacattccagttgccactacta
gtgggcacagaacagccttgcctaaacagtcactacttgacaaggcctcc
tagttagggttactgttgctgtgatgaaacaccatagccaaaagcactgt
ggggagggaaggggttgtttgtttgccttacgtatcctgagtcatagtct
attaatgaaaaccaaggcaagagttcaaactgagcaggaacttggaggca
ggggctgatgcagaggaaaactgaccagtgtaggcctcttttaagatgca
gacatggatgtaaagggcatgtactctaaccagtggggaggcatcaggtt
ggacccacatctgctttgctgattatgcctcagccgttccctttgccggt
cggcttacctg
gaattccctgataattttttccgaccatcttgtgttccttgcctgctgct
gggaggtcctaatcgtttccggtttcaatgggggttcttgttgtttgctt
gctttttgagacagtgtctcatggagccccaggttggccttgaactcaat
acacagctgagactctgactccacctcccaagtattgggattacaatagg
tatgccatgccatgcctggatatttagataaaatgtggggagaaatgaat
gacgcagcaacttcaaggtgggagagggacagctgtaagatatcaaggct
gtgaagtccagttgacgacactcacatgtcccacactgccactggaaaca
tcttaaagggaaaggttcttcctcactccggttatgacagagcttatgtc
tgtggactgcctgcttggttgctgcgagactggtgagccacttacccctg
gtggccaggaggcagagtgggaaaggggcagcaatctaagtataatccca
agtggacacatgttatgtgacagactgtccccgaagaaacacaacacaca
cttctactcagcccaggtaggaagcccataacagaccaaactacagttag
agtcaaagtccaactggatgagccaaagagttttattggggttacttata
gaaatatgagggaggggtcaagacagctgagtcaccaaagcccacctcag
cacgagtgacagctcacaaacctggtaacctggaacacacttcacagcct
acaggcagctcaaccggttggagggtgtccttcccaagaccctcagttgg
tctaaaccagtggttctcagccttctcaaagctgtgaccctttaatacag
tttcttgtgctgtggtgaaccccccaaaaaaaaaataattttgttgctac
ttcataactgtaattttgctacgggcatgaatcatgatgtaatatctgat
atgtgcccctttgagactcctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_91668146_91668662
seq2: B6Ng01-106H20.b_41_557

seq1  GAATTCTTCCAAGAAAATGGAAGCCGGCTTCCTTTTTTTTGGGAAGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCAAGAAAATGGAAGCCGGCTTCCTTTTTTTTGGGAAGGTCA  50

seq1  CTTCAAGGCCTTGTCCTCAGTCTGAGCTCTACACAGCTTCTCCCAAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGGCCTTGTCCTCAGTCTGAGCTCTACACAGCTTCTCCCAAAACT  100

seq1  GCACCAGCAGTATTGCTGGGCTCAGGAGCTCGCTGACATTCCAGTTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGCAGTATTGCTGGGCTCAGGAGCTCGCTGACATTCCAGTTGCCA  150

seq1  CTACTAGTGGGCACAGAACAGCCTTGCCTAAACAGTCACTACTTGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGTGGGCACAGAACAGCCTTGCCTAAACAGTCACTACTTGACAAG  200

seq1  GCCTCCTAGTTAGGGTTACTGTTGCTGTGATGAAACACCATAGCCAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTAGTTAGGGTTACTGTTGCTGTGATGAAACACCATAGCCAAAAG  250

seq1  CACTGTGGGGAGGGAAGGGGTTGTTTGTTTGCCTTACGTATCCTGAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGGGAGGGAAGGGGTTGTTTGTTTGCCTTACGTATCCTGAGTCA  300

seq1  TAGTCTATTAATGAAAACCAAGGCAAGAGTTCAAACTGAGCAGGAACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTATTAATGAAAACCAAGGCAAGAGTTCAAACTGAGCAGGAACTTG  350

seq1  GAGGCAGGGGCTGATGCAGAGGAAAACTGACCAGTGTAGGCCTCTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGGGCTGATGCAGAGGAAAACTGACCAGTGTAGGCCTCTTTTAA  400

seq1  GATGCAGACATGGATGTAAAGGGCATGTACTCTAACCAGTGGGGAGGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGACATGGATGTAAAGGGCATGTACTCTAACCAGTGGGGAGGCAT  450

seq1  CAGGTTGGACCCACATCTGCTTTGCTGATCATGCCTCAGCCGTTCCCTTT  500
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGGTTGGACCCACATCTGCTTTGCTGATTATGCCTCAGCCGTTCCCTTT  500

seq1  GCCGGTTGGCTTACCTG  517
      |||||| ||||||||||
seq2  GCCGGTCGGCTTACCTG  517

seq1: chr1_91808321_91808866
seq2: B6Ng01-106H20.g_67_612 (reverse)

seq1  TGTTGTGTTTCTTCGGGGACAGTCTGTCACATAACATGTGTCCACTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGTTTCTTCGGGGACAGTCTGTCACATAACATGTGTCCACTTGGG  50

seq1  ATTATACTTAGATTGCTGCCCCTTTCCCACTCTGCCTCCTGGCCACCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTTAGATTGCTGCCCCTTTCCCACTCTGCCTCCTGGCCACCAGG  100

seq1  GGTAAGTGGCTCACCAGTCTCGCAGCAACCAAGCAGGCAGTCCACAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTGGCTCACCAGTCTCGCAGCAACCAAGCAGGCAGTCCACAGACA  150

seq1  TAAGCTCTGTCATAACCGGAGTGAGGAAGAACCTTTCCCTTTAAGATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCTGTCATAACCGGAGTGAGGAAGAACCTTTCCCTTTAAGATGTT  200

seq1  TCCAGTGGCAGTGTGGGACATGTGAGTGTCGTCAACTGGACTTCACAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGCAGTGTGGGACATGTGAGTGTCGTCAACTGGACTTCACAGCC  250

seq1  TTGATATCTTACAGCTGTCCCTCTCCCACCTTGAAGTTGCTGCGTCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATCTTACAGCTGTCCCTCTCCCACCTTGAAGTTGCTGCGTCATTC  300

seq1  ATTTCTCCCCACATTTTATCTAAATATCCAGGCATGGCATGGCATACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCCCACATTTTATCTAAATATCCAGGCATGGCATGGCATACCTA  350

seq1  TTGTAATCCCAATACTTGGGAGGTGGAGTCAGAGTCTCAGCTGTGTATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATCCCAATACTTGGGAGGTGGAGTCAGAGTCTCAGCTGTGTATTG  400

seq1  AGTTCAAGGCCAACCTGGGGCTCCATGAGACACTGTCTCAAAAAGCAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGGCCAACCTGGGGCTCCATGAGACACTGTCTCAAAAAGCAAGC  450

seq1  AAACAACAAGAACCCCCATTGAAACCGGAAACGATTAGGACCTCCCAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACAAGAACCCCCATTGAAACCGGAAACGATTAGGACCTCCCAGCA  500

seq1  GCAGGCAAGGAACACAAGATGGTCGGAAAAAATTATCAGGGAATTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAAGGAACACAAGATGGTCGGAAAAAATTATCAGGGAATTC  546