BAC Information

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BAC

Clone NameB6Ng01-107A10
Chromosome1 (Build37)
Map Location 191,655,672 - 191,777,415
singlet/doubletdoublet
Overlap genePtpn14, Smyd2
Upstream geneUsh2a, Kctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf, LOC100042438
Downstream geneProx1, LOC100039394, EG666975, Rps6kc1, Angel2, Vash2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107A10.bB6Ng01-107A10.g
ACCDH914605DH914606
length1,1451,054
definitionDH914605|Mus musculus domesticus DNA, BAC clone: B6Ng01-107A10, 5' end.DH914606|Mus musculus domesticus DNA, BAC clone: B6Ng01-107A10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(191,655,672 - 191,656,823)(191,776,364 - 191,777,415)
sequence
gaattcactcactaggctgcatcttcagggcagcgagctccaggttccag
ccttgcagactgtcggcctcccaagccatctgtttcagttgttcccagca
cccacgtcaaaccccgtaagacacccaagccatattttctcctcgtggat
tctaaggctagacctcaggtgttcctgctcacacaacaagcattccctca
cactttgtatgaatccgcccgcatttcagaccccgccctgtaccctagac
agcaggagcagggagacgccctcagcaggacgtagctggaagatttcttg
ccgttacctatggagcatagaagccagatgtgcatgctttgccctcttgg
tgcctgacagtctgggcatatccagtatgccttggctgaggcactaagga
ggacatgtacacatgaggtcctgcagacagtcctgtaggtgtcctgaggt
gtgttccagcccctcccatgctgagcagcaagtaacaccagaaagagcca
gctctgccaccacacagtttaaactcattgcctggaattttagaggcagg
caaaaggtcctggcacagcagattccaatgttcaactcttaaaaatgata
gcctgcatggatactcattggcttctgccctaatcattaaaaaacacata
cccgcaggctgtggagacagatggacagtaatgagcttgtaaggacgtaa
gtttgattcccagaacccacgtaaaagaaaagctggctgaggaggcagag
ctgggtgaggcctggagctttctgcctaacgggtcccattggctatggag
aagacgtgtgtgcaacagtagggaccatatacctgagcctagtcttctgg
ggagggggcgggtgcatcactggagacacctgtcaagagagccactgtca
gacaccacccctgatctgtaatcctgttcttccaggatttggccatggag
gaggcggctctggaggagctaacccagaagtgcccaggaacacaaagctc
ataggtagcagcggagttcgaagagcctgtccggccacgccagcacacat
tctgtctccctcccaactcctggtggtgcttcctccctccctcttcctgt
cctaatctttcttcctaactctctcctttccctcctgccctcctc
gaattccagtggtgcatttgtttagcacaaggtacttacatgacagatag
catgtttcataggcatgtgctgttcttgcctacagttccgacgtaagttt
caaagctctctctctctctccctctcttcttcttcttcttctccttctcc
tcctcctcatcctcatcctttttcttcctcttcttcatcttcttcctctt
cttcctcttctttttctttttcctagattgggagaatatccagctgcctt
catgcccagcaaattgccagtgccaaagggctaggcatcatctatggcag
gcagtgcaagggaaggctttataacatttgtcaggcacagtggagtaaaa
tccattggccaccatatttttatcaactaaatggataacctgagttctcc
ctaggtggatacttccaaggggaccagaagtatgcctcacctcattttat
ttttctgctctggaaggggaaagggagagaagatggtttgtgaagtagtt
ttaaatttactacaatgttggtagaagtctggaatatgccaagaaagtaa
gaaaacaggtaaagatgtaaataaataaatactaagaaagcatctgcagg
tcagtatgtagcttgtttggacatgggaatcccatgaagagatgatgaga
aggacaggaagagggaaacaagggtgtggaagggcccaggtgaagctccg
cttggaccctggctgttggtatctggggatggggacatggaaggcacaag
ggtaagctagggcctcaaaccttcaaatgctgtgatgacaagcatgtggc
acaatgttctgctctgtatttttaatgtcatattatgttgtcttttccag
gtctaaaaaaatttaattcttggaaaataaaatctttactaaaggacatg
aaatcataaataataagacagtttcaagacaattgaatatagatagaaga
ttgatataaataaacaatagattaattgctaatagattgtagatgacaga
tagatgagattataactaactagataggtagaaagaatggtctagatatt
taga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_191655672_191656823
seq2: B6Ng01-107A10.b_46_1190

seq1  GAATTCACTCACTAGGCTGCATCTTCAGGGCAGCGAGCTCCAGGTTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACTAGGCTGCATCTTCAGGGCAGCGAGCTCCAGGTTCCAG  50

seq1  CCTTGCAGACTGTCGGCCTCCCAAGCCATCTGTTTCAGTTGTTCCCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAGACTGTCGGCCTCCCAAGCCATCTGTTTCAGTTGTTCCCAGCA  100

seq1  CCCACGTCAAACCCCGTAAGACACCCAAGCCATATTTTCTCCTCGTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGTCAAACCCCGTAAGACACCCAAGCCATATTTTCTCCTCGTGGAT  150

seq1  TCTAAGGCTAGACCTCAGGTGTTCCTGCTCACACAACAAGCATTCCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGCTAGACCTCAGGTGTTCCTGCTCACACAACAAGCATTCCCTCA  200

seq1  CACTTTGTATGAATCCGCCCGCATTTCAGACCCCGCCCTGTACCCTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTATGAATCCGCCCGCATTTCAGACCCCGCCCTGTACCCTAGAC  250

seq1  AGCAGGAGCAGGGAGACGCCCTCAGCAGGACGTAGCTGGAAGATTTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGCAGGGAGACGCCCTCAGCAGGACGTAGCTGGAAGATTTCTTG  300

seq1  CCGTTACCTATGGAGCATAGAAGCCAGATGTGCATGCTTTGCCCTCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTACCTATGGAGCATAGAAGCCAGATGTGCATGCTTTGCCCTCTTGG  350

seq1  TGCCTGACAGTCTGGGCATATCCAGTATGCCTTGGCTGAGGCACTAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACAGTCTGGGCATATCCAGTATGCCTTGGCTGAGGCACTAAGGA  400

seq1  GGACATGTACACATGAGGTCCTGCAGACAGTCCTGTAGGTGTCCTGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGTACACATGAGGTCCTGCAGACAGTCCTGTAGGTGTCCTGAGGT  450

seq1  GTGTTCCAGCCCCTCCCATGCTGAGCAGCAAGTAACACCAGAAAGAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCAGCCCCTCCCATGCTGAGCAGCAAGTAACACCAGAAAGAGCCA  500

seq1  GCTCTGCCACCACACAGTTTAAACTCATTGCCTGGAATTTTAGAGGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCCACCACACAGTTTAAACTCATTGCCTGGAATTTTAGAGGCAGG  550

seq1  CAAAAGGTCCTGGCACAGCAGATTCCAATGTTCAACTCTTAAAAATGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGTCCTGGCACAGCAGATTCCAATGTTCAACTCTTAAAAATGATA  600

seq1  GCCTGCATGGATACTCATTGGCTTCTGCCCTAATCATTAAAAAACACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATGGATACTCATTGGCTTCTGCCCTAATCATTAAAAAACACATA  650

seq1  CCCGCAGGCTGTGGAGACAGATGGACAGTAATGAGCTTGTAAGGACGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAGGCTGTGGAGACAGATGGACAGTAATGAGCTTGTAAGGACGTAA  700

seq1  GTTTGATTCCCAGAACCCACGTAAAAGAAAAGCTGGCTGAGGAGGCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTCCCAGAACCCACGTAAAAGAAAAGCTGGCTGAGGAGGCAGAG  750

seq1  CTGGGTGAGGCCTGGAGCTTTCTGCCTAACGGGTCCCATTGGCTATGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGAGGCCTGGAGCTTTCTGCCTAACGGGTCCCATTGGCTATGGAG  800

seq1  AAGACGTGTGTGCAACAGTAGGGACCATATACCTGAGCCTAGTCTTCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTGTGTGCAACAGTAGGGACCATATACCTGAGCCTAGTCTTCTGG  850

seq1  GGAGGGGGCGGGTGCATCACTGGAGACACCTGTCAAGAGAGCCACTGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGCGGGTGCATCACTGGAGACACCTGTCAAGAGAGCCACTGTCA  900

seq1  GACACCACCCCTGATCTGTAATCCTGTTCTTCCAGGATTTGGCCATGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCACCCCTGATCTGTAATCCTGTTCTTCCAGGATTTGGCCATGGAG  950

seq1  GAGGCGGCTCTGGAGGAGCTAACCCAGAAGGTGGCCCAGGAACACAAAGC  1000
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  GAGGCGGCTCTGGAGGAGCTAACCCAGAAG--TGCCCAGGAACACAAAGC  998

seq1  TCATAGGTAAGGCAGGCGGAGTCCG-AGAGCCTGTCCGGCCAACGCAGCA  1049
      |||||||||  ||| ||||||| || ||||||||||||||||   |||||
seq2  TCATAGGTA--GCA-GCGGAGTTCGAAGAGCCTGTCCGGCCACGCCAGCA  1045

seq1  CACATTCTGTCT-CCTCCCAACTCCTGGTTGTGCTTCCTCCCTCCCTCTT  1098
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  CACATTCTGTCTCCCTCCCAACTCCTGGTGGTGCTTCCTCCCTCCCTCTT  1095

seq1  CCTGTCCTTATCTTTTCTTCCTTACTCTCTTCCTCTCCCTCCCTGCCCCT  1148
      |||||||| ||| ||||||||| |||||| |||| ||||| |||| ||||
seq2  CCTGTCCTAATC-TTTCTTCCTAACTCTC-TCCTTTCCCT-CCTG-CCCT  1141

seq1  CCTC  1152
      ||||
seq2  CCTC  1145

seq1: chr1_191776364_191777415
seq2: B6Ng01-107A10.g_66_1119 (reverse)

seq1  TCTAAATATCTATACCTATCTATCTACCTATCTAGTTAGTTATAATCTAC  50
      |||||||||||| |||  ||| |||||||||||||||||||||||||| |
seq2  TCTAAATATCTAGACCATTCTTTCTACCTATCTAGTTAGTTATAATCT-C  49

seq1  ATCTATCTGTCATCTACAATCTATTAGCAATTTATCTATTTGTTTATTTA  100
      |||||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  ATCTATCTGTCATCTACAATCTATTAGCAATTAATCTA-TTGTTTATTTA  98

seq1  TATCAATCTTCTATCTATATTCAA-TGTCTTGAAACTGTCTTATTATTTA  149
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATCAATCTTCTATCTATATTCAATTGTCTTGAAACTGTCTTATTATTTA  148

seq1  TGATTTCATGT-CTTTAGTAAAGATTTTA-TTTCCAAGAATTAAATTTTT  197
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  TGATTTCATGTCCTTTAGTAAAGATTTTATTTTCCAAGAATTAAATTTTT  198

seq1  TTAGACCTGG-AAAGACAACATAATATGACATTAAAAATACAGAGCAGAA  246
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTGGAAAAGACAACATAATATGACATTAAAAATACAGAGCAGAA  248

seq1  CATTGTGCCACATGCTTGTCATCACAGCATTTGAAGGTTTGAGGCCCTAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGCCACATGCTTGTCATCACAGCATTTGAAGGTTTGAGGCCCTAG  298

seq1  CTTACCCTTGTGCCTTCCATGTCCCCATCCCCAGATACCAACAGCCAGGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCTTGTGCCTTCCATGTCCCCATCCCCAGATACCAACAGCCAGGG  348

seq1  TCCAAGCGGAGCTTCACCTGGGCCCTTCCACACCCTTGTTTCCCTCTTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCGGAGCTTCACCTGGGCCCTTCCACACCCTTGTTTCCCTCTTCC  398

seq1  TGTCCTTCTCATCATCTCTTCATGGGATTCCCATGTCCAAACAAGCTACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCTCATCATCTCTTCATGGGATTCCCATGTCCAAACAAGCTACA  448

seq1  TACTGACCTGCAGATGCTTTCTTAGTATTTATTTATTTACATCTTTACCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACCTGCAGATGCTTTCTTAGTATTTATTTATTTACATCTTTACCT  498

seq1  GTTTTCTTACTTTCTTGGCATATTCCAGACTTCTACCAACATTGTAGTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTACTTTCTTGGCATATTCCAGACTTCTACCAACATTGTAGTAA  548

seq1  ATTTAAAACTACTTCACAAACCATCTTCTCTCCCTTTCCCCTTCCAGAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAACTACTTCACAAACCATCTTCTCTCCCTTTCCCCTTCCAGAGC  598

seq1  AGAAAAATAAAATGAGGTGAGGCATACTTCTGGTCCCCTTGGAAGTATCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATAAAATGAGGTGAGGCATACTTCTGGTCCCCTTGGAAGTATCC  648

seq1  ACCTAGGGAGAACTCAGGTTATCCATTTAGTTGATAAAAATATGGTGGCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGGAGAACTCAGGTTATCCATTTAGTTGATAAAAATATGGTGGCC  698

seq1  AATGGATTTTACTCCACTGTGCCTGACAAATGTTATAAAGCCTTCCCTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATTTTACTCCACTGTGCCTGACAAATGTTATAAAGCCTTCCCTTG  748

seq1  CACTGCCTGCCATAGATGATGCCTAGCCCTTTGGCACTGGCAATTTGCTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTGCCATAGATGATGCCTAGCCCTTTGGCACTGGCAATTTGCTG  798

seq1  GGCATGAAGGCAGCTGGATATTCTCCCAATCTAGGAAAAAGAAAAAGAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAAGGCAGCTGGATATTCTCCCAATCTAGGAAAAAGAAAAAGAAG  848

seq1  AGGAAGAAGAGGAAGAAGATGAAGAAGAGGAAGAAAAAGGATGAGGATGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGAGGAAGAAGATGAAGAAGAGGAAGAAAAAGGATGAGGATGA  898

seq1  GGAGGAGGAGAAGGAGAAGAAGAAGAAGAAGAGAGGGAGAGAGAGAGAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGAGAAGGAGAAGAAGAAGAAGAAGAGAGGGAGAGAGAGAGAGA  948

seq1  GCTTTGAAACTTACGTCGGAACTGTAGGCAAGAACAGCACATGCCTATGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAACTTACGTCGGAACTGTAGGCAAGAACAGCACATGCCTATGA  998

seq1  AACATGCTATCTGTCATGTAAGTACCTTGTGCTAAACAAATGCACCACTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTATCTGTCATGTAAGTACCTTGTGCTAAACAAATGCACCACTG  1048

seq1  GAATTC  1052
      ||||||
seq2  GAATTC  1054