BAC Information

Click to search

BAC

Clone NameB6Ng01-107B23
Chromosome1 (Build37)
Map Location 113,067,846 - 113,068,903
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041429, EG626652, Cdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107B23.bB6Ng01-107B23.g
ACCDH914678DH914679
length1,0501,195
definitionDH914678|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B23, 5' end.DH914679|Mus musculus domesticus DNA, BAC clone: B6Ng01-107B23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgtttagaagatgaggtatgggcatgagaatgttggagctc
aactcattttctggttttttatctattttacctcagttctagatatcgat
gattttttgaaggtgctagctatattctcaatgtcttttccatacttagt
tagtcctctatagataacccatctcatgctgaaaaataataatctactag
tgacatagatgttaccgaatctaatcaagttcattatttcaacatcatag
tgcattgaactatgaattgaccctatgggaatattttaagtataggaaaa
taacaacaataaaacaatttctcaagaatattacagtaaaattatattac
tttgtttgtttgtttgtttaaattgtaacagggatcaagaccttaatagg
cacccagaacttagcttaactgggtccatcctgaatgtattattcatggt
acaaaattcaatacagagatagtaccatctgccaaaaataaaaccaaaga
tgtaatccatgtaagccattagttattcaaaagcatctagatgttctaac
tttactttgaaggcttctgtaggttcccttctggactaactttttgttca
ctgaagtacatcaacccaggaaatggtttttgagcttaaaaagggggttt
ctgtaggggaaaccaggaaaggggataacacttgacatgtaaataaataa
attatccaataagaaaaaaaattactcatcctgagaaaggctctgtgctg
caggatcctaaacacccagtgtaatcaccaagcatcgaatggagactttg
tatggcttaaatccacatccaagctgttttctctctgaataccccacaca
gaagtattttcactctttaataaactacaatttcaattgtaagctcttgc
tagttaaaagataaaacaacacaatcagatctttctcatatatcaattgt
cataataagaaaactgtactactcatgactagactcatgactagcacaag
caccagattcacagtactagcagaaatcgtgcaagtttctgagtatagca

gaattctggagaatgaaaacctagggaagaggaccagaacaacaaaagta
agaatcaccaatacaagagatggaagagagaatctcaggtgtagaagggg
caatagaagaaatttacacatcagtcagagaaaatgttaaatctaaaaaa
gcattaggacactaacatccaggaaatgtgggatatgaaaagacccaacc
taagaatgtagaaatagaaggtaatgagtcttggcactagtgaccataaa
atatgtttagcaaaatcatagaagaaactttctgaacataaagaggctta
tagaacataaaaacataaagaacatagaacataaagaaagaggcttatag
aacatacagaggcttctagaacagaaatctgactggaccagaaaaataaa
aagtaaaataagaaggcagacctatcagaattatacttgacttctcaaag
gaggttctgaaagctagaaaattattagcagatatctagcaacctctaat
aaaactgcaggtgcgaacttagtctactaacagtcaacatagatggaaag
tataaagtatttcaagggaaattcaaatttaaataatatatatccatata
accagccctcaagaaaatattagaaaataaactgtaacttaaggaggata
agtatatccaagaaaacacaggaaataagtaattccatacgagcaaaaaa
caaaggaagcacaccaaaacacatcaaacacacacatacatacacacata
cacacacaaacacgaatatcaccaacatcaaaataacagggaagtagcaa
ttactgaacattaatatctctcaacatcactagatttaattcctcaatac
aaagtcacaggctaacagaatgaatcacaaaacaggatccaccatcctgc
tgtataaagaaacacaccaaagtaaataagacagacattgcctcagatta
gagcttgaaaaagtttccaaacaaatagacccattatatttgtaatacaa
acttttcaaaagataaattgtatattgaccccacatatcattatagagaa
actttaaaccctacgtcacaaacttataatcatcatacaaaaataacaga
agtacttgtacagcacctatgagtcatggtccctacggatcacaattgcc
gacatggagtatagttgcgtacgcattgacagtagacacacgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113067846_113068903
seq2: B6Ng01-107B23.b_42_1091

seq1  GAATTCTCTTGTTTAGAAGATGAAGTATGGGCATGAGAATGTTGGAGCTC  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAATTCTCTTGTTTAGAAGATGAGGTATGGGCATGAGAATGTTGGAGCTC  50

seq1  AACTCATTTTCTGGTTTTTTATCTATTTTACCTCAGTTCTAGATATCGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTTTCTGGTTTTTTATCTATTTTACCTCAGTTCTAGATATCGAT  100

seq1  GATTTTTTGAAGGTGCTAGCTATATTCTCAATGTCTTTTCCATACTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTGAAGGTGCTAGCTATATTCTCAATGTCTTTTCCATACTTAGT  150

seq1  TAGTCCTCTATAGATAACCCATCTCATGCTGAAAAATAATAATCTACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTCTATAGATAACCCATCTCATGCTGAAAAATAATAATCTACTAG  200

seq1  TGACATAGATGTTACCGAATCTAATCAAGTTCATTATTTCAACATCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGATGTTACCGAATCTAATCAAGTTCATTATTTCAACATCATAG  250

seq1  TGCATTGAACTATGAATTGACCCTATGGGAATATTTTAAGTATAGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGAACTATGAATTGACCCTATGGGAATATTTTAAGTATAGGAAAA  300

seq1  TAACAACAATAAAACAATTTCTCAAGAATATTACAGTAAAATTATATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACAATAAAACAATTTCTCAAGAATATTACAGTAAAATTATATTAC  350

seq1  TTTGTTTGTTTGTTTGTTTAAATTGTAACAGGGATCAAGACCTTAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTGTTTAAATTGTAACAGGGATCAAGACCTTAATAGG  400

seq1  CACCCAGAACTTAGCTTAACTGGGTCCATCCTGAATGTATTATTCATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGAACTTAGCTTAACTGGGTCCATCCTGAATGTATTATTCATGGT  450

seq1  ACAAAATTCAATACAGAGATAGTACCATCTGCCAAAAATAAAACCAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTCAATACAGAGATAGTACCATCTGCCAAAAATAAAACCAAAGA  500

seq1  TGTAATCCATGTAAGCCATTAGTTATTCAAAAGCATCTAGATGTTCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCCATGTAAGCCATTAGTTATTCAAAAGCATCTAGATGTTCTAAC  550

seq1  TTTACTTTGAAGGCTTCTGTAGGTTCCCTTCTGGACTAACTTTTTGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTGAAGGCTTCTGTAGGTTCCCTTCTGGACTAACTTTTTGTTCA  600

seq1  CTGAAGTACATCAACCCAGGAAATGGTTTTTGAGCTTAAAAAGGGGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTACATCAACCCAGGAAATGGTTTTTGAGCTTAAAAAGGGGGTTT  650

seq1  CTGTAGGGGAAACCAGGAAAGGGGATAACACTTGACATGTAAATAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGGGAAACCAGGAAAGGGGATAACACTTGACATGTAAATAAATAA  700

seq1  ATTATCCAATAAGAAAAAAAATTACTCATCCTGAGAAAGGCTCTGTGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCAATAAGAAAAAAAATTACTCATCCTGAGAAAGGCTCTGTGCTG  750

seq1  CAGGATCCTAAACACCCAGTGTAATCACCAAGCATCGAATGGAGACTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCCTAAACACCCAGTGTAATCACCAAGCATCGAATGGAGACTTTG  800

seq1  TATGGCTTAAATCCACATCCAAGCTGTTTTCTCTCTGAATACCCCACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTAAATCCACATCCAAGCTGTTTTCTCTCTGAATACCCCACACA  850

seq1  GAAGTATTTTCACTCTTTAATAAACTACAATTTCAATTGTAAGCTCTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATTTTCACTCTTTAATAAACTACAATTTCAATTGTAAGCTCTTGC  900

seq1  TAGTTAAAAGATAAAACAACACAATCAGATCTTTCTCATATTATCAATTG  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGTTAAAAGATAAAACAACACAATCAGATCTTTCTCATA-TATCAATTG  949

seq1  TCATAATAAGAAAAACTGTACTACTCATGACTTAGACTCATGACATAGCA  1000
      |||||||||| |||||||||||||||||||| |||||||||||| |||||
seq2  TCATAATAAG-AAAACTGTACTACTCATGAC-TAGACTCATGAC-TAGCA  996

seq1  CAAAGCAACCAGATTCACAGTAATAGCAGAAAATTGTTGCAATTTTCTGA  1050
      | |||| ||||||||||||||| |||||||||  |  ||||| |||||||
seq2  C-AAGC-ACCAGATTCACAGTACTAGCAGAAA--TCGTGCAAGTTTCTGA  1042

seq1  GTATAGCA  1058
      ||||||||
seq2  GTATAGCA  1050