BAC Information

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BAC

Clone NameB6Ng01-107F07
Chromosome1 (Build37)
Map Location 94,575,743 - 94,576,971
singlet/doubletsinglet
Overlap genenone
Upstream geneTwist2, Hdac4, LOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos
Downstream geneGpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107F07.bB6Ng01-107F07.g
ACCDH914827DH914828
length1,213459
definitionDH914827|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F07, 5' end.DH914828|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgatgtagaagctgcacagtaacatctgtcccctacctattc
cccaggcaagcccctgactcccagctggtaatatacgggactactcaggt
ctgcaggcagaggaacaggagccgcctcgttaggcagggtggatggctat
gtactgtggcatatgtttagaggacagaagggaaagtctttgaagaagga
cacggggcctttctgctctatgtggccaagctctgtgccatcagctatgt
ggggtccagtgtaggcaggaccagaaaggcaagggcatcttcgctcatat
ggtaccagacccacaatgtccatctgagtgtcacagtgactgggggatca
cagatcaaccccttcttcttctgggcttagaaggggtaggatccctaagt
ttgaagcctagcaggcctccagtggctttagggatgtgtaggtatcagct
gcctgtccaggtaaagtggtaaaaggaaattggatgcactggcatccaat
gggtactctttggcaatgatgcctttgaagatggcacagagaccaatgga
ctgacttcagaatgagaggagagaacctccctatcccctcacgtgatgcc
ctcaatggcagtgactccggagagtgtaacccacagcactctgaggtagt
ctaggaactctcaaaaaggaaggcatgggggctgggatggaatacaactg
gtacatcctcatgtgcagcttcctttgaatgcccagactgttgaagcctg
aaatacacaagggacaaacacacatgcttatgtataaattatagatgtaa
attacatcttgtgttatgtatcaattgtttgtgaattatacatacataat
ttatacataaattatgcaccatatttatataaatacataaaatactttat
tcatatttatgtctcatgtatttagatattaatatactcctgcctttcag
ctttctattttcatttataattgatgctgaaattcttcccatgtaggaca
tagggatcttatctaattctctcgatggctgcttcccaggccgtttcgag
gaacgtctatcactattcatcacttcaatccacttttgaatgtggtttgt
tcaaggacagcttttgactgcctctaatgctcatggatggcgtttttctt
ctctttttacctaaaaatatgaattcctagagcttaaactttgacatctg
attctctggatga

ctaatttgatatctgtcaaatttctttttaggaagaaaggtttaagagat
ggttttagttcttttgctaagttgtaataaagttagcgtcaagaatagaa
cgtgcccactcctcattaagtaaaggttacacaataagaaatacaatgtg
ttttcataattacactaaaaagagatataggcttgggacaaatttatatt
caaggaaaagcattcaggttcaaggatgaagccactggtgtacctatgat
aaggcaaagccatataaaactgttgccttgaacttatgatgagcagagag
aatggagcactgctttgaacttaatatcaacatccttctgtaactcccat
tttgtatagtattttatctatgaggtaaatctctaagaacttagtctata
aaaaggccagagagtagaaataaaggtgatatggtgtgatgtgatggctt
ggggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_94575743_94576971
seq2: B6Ng01-107F07.b_47_1259 (reverse)

seq1  TCATCCAGAGAATTCAAGGATGGTTCAAAGTTAAGACGTCTATGAAATTC  50
      |||||||||||| |||  ||||  |||||||| | |  |||| | |||||
seq2  TCATCCAGAGAA-TCA--GATG--TCAAAGTTTA-AGCTCTA-GGAATTC  43

seq1  ATATATTTAAGGGTAAAAAG-GAAGAAAACACG-CATCCATTGAAGCCAT  98
      |||| ||||  ||||||||| |||||||| ||| |||||||   |||   
seq2  ATATTTTTA--GGTAAAAAGAGAAGAAAA-ACGCCATCCAT--GAGC---  85

seq1  TTTAGAGCCAGTCAAAAGCTGTCTGTGAACCAAACCCACA-TCAAAAGTG  147
       |||||| |||||||||||||||  |||||  || ||||| |||||||||
seq2  ATTAGAGGCAGTCAAAAGCTGTCCTTGAAC--AAACCACATTCAAAAGTG  133

seq1  GATGGAGTGGATGAATTAGTGATAGACGTTCCTCGGAACGGCCTGGGAAG  197
      ||| ||   |||||| ||||||||||||||||||| ||||||||||||||
seq2  GATTGAAGTGATGAA-TAGTGATAGACGTTCCTCGAAACGGCCTGGGAAG  182

seq1  CAGCCATCGGAGAGAATTAGAT-AGATCCCTATGTCCTACATGGGAAGAA  246
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  CAGCCATC-GAGAGAATTAGATAAGATCCCTATGTCCTACATGGGAAGAA  231

seq1  TTTCAGCATCAATTATTAAATGAAAATAGAAAGCTGAAAGGCAGGAGTAT  296
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCAGCATCAATTA-TAAATGAAAATAGAAAGCTGAAAGGCAGGAGTAT  280

seq1  ATTAATATCTAAATACATGAGACATAAATATGAATAAAGTATTTTATGTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATCTAAATACATGAGACATAAATATGAATAAAGTATTTTATGTA  330

seq1  TTTATATAAATATGGTGCATAATTTATGTATAAATTATGTATGTATAATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAAATATGGTGCATAATTTATGTATAAATTATGTATGTATAATT  380

seq1  CACAAACAATTGATACATAACACAAGATGTAATTTACATCTATAATTTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACAATTGATACATAACACAAGATGTAATTTACATCTATAATTTAT  430

seq1  ACATAAGCATGTGTGTTTGTCCCTTGTGTATTTCAGGCTTCAACAGTCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGCATGTGTGTTTGTCCCTTGTGTATTTCAGGCTTCAACAGTCTG  480

seq1  GGCATTCAAAGGAAGCTGCACATGAGGATGTACCAGTTGTATTCCATCCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCAAAGGAAGCTGCACATGAGGATGTACCAGTTGTATTCCATCCC  530

seq1  AGCCCCCATGCCTTCCTTTTTGAGAGTTCCTAGACTACCTCAGAGTGCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCATGCCTTCCTTTTTGAGAGTTCCTAGACTACCTCAGAGTGCTG  580

seq1  TGGGTTACACTCTCCGGAGTCACTGCCATTGAGGGCATCACGTGAGGGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTACACTCTCCGGAGTCACTGCCATTGAGGGCATCACGTGAGGGGA  630

seq1  TAGGGAGGTTCTCTCCTCTCATTCTGAAGTCAGTCCATTGGTCTCTGTGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGGTTCTCTCCTCTCATTCTGAAGTCAGTCCATTGGTCTCTGTGC  680

seq1  CATCTTCAAAGGCATCATTGCCAAAGAGTACCCATTGGATGCCAGTGCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCAAAGGCATCATTGCCAAAGAGTACCCATTGGATGCCAGTGCAT  730

seq1  CCAATTTCCTTTTACCACTTTACCTGGACAGGCAGCTGATACCTACACAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTCCTTTTACCACTTTACCTGGACAGGCAGCTGATACCTACACAT  780

seq1  CCCTAAAGCCACTGGAGGCCTGCTAGGCTTCAAACTTAGGGATCCTACCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAGCCACTGGAGGCCTGCTAGGCTTCAAACTTAGGGATCCTACCC  830

seq1  CTTCTAAGCCCAGAAGAAGAAGGGGTTGATCTGTGATCCCCCAGTCACTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAGCCCAGAAGAAGAAGGGGTTGATCTGTGATCCCCCAGTCACTG  880

seq1  TGACACTCAGATGGACATTGTGGGTCTGGTACCATATGAGCGAAGATGCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTCAGATGGACATTGTGGGTCTGGTACCATATGAGCGAAGATGCC  930

seq1  CTTGCCTTTCTGGTCCTGCCTACACTGGACCCCACATAGCTGATGGCACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTTTCTGGTCCTGCCTACACTGGACCCCACATAGCTGATGGCACA  980

seq1  GAGCTTGGCCACATAGAGCAGAAAGGCCCCGTGTCCTTCTTCAAAGACTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGCCACATAGAGCAGAAAGGCCCCGTGTCCTTCTTCAAAGACTT  1030

seq1  TCCCTTCTGTCCTCTAAACATATGCCACAGTACATAGCCATCCACCCTGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTGTCCTCTAAACATATGCCACAGTACATAGCCATCCACCCTGC  1080

seq1  CTAACGAGGCGGCTCCTGTTCCTCTGCCTGCAGACCTGAGTAGTCCCGTA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACGAGGCGGCTCCTGTTCCTCTGCCTGCAGACCTGAGTAGTCCCGTA  1130

seq1  TATTACCAGCTGGGAGTCAGGGGCTTGCCTGGGGAATAGGTAGGGGACAG  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCAGCTGGGAGTCAGGGGCTTGCCTGGGGAATAGGTAGGGGACAG  1180

seq1  ATGTTACTGTGCAGCTTCTACATCAGAGAATTC  1229
      |||||||||||||||||||||||||||||||||
seq2  ATGTTACTGTGCAGCTTCTACATCAGAGAATTC  1213


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