BAC Information

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BAC

Clone NameB6Ng01-107F22
Chromosome1 (Build37)4 (Build37)
Map Location 144,273,282 - 144,273,83496,135,091 - 96,136,132
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107F22.bB6Ng01-107F22.g
ACCDH914855DH914856
length9511,089
definitionDH914855|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F22, 5' end.DH914856|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(144,273,282 - 144,273,834)(96,135,091 - 96,136,132)
sequence
gaattccttttctggtccagtctatttggagctctgtaggcttcttgtat
gttcatgggcatctctttctttaggtttgggaagttttcttctaaaattt
tgttgaagatatttgttggccctttaagttgaaaagcttcattctcatct
acccctattatctgtaggtttggtcttctcattgtgtcctggagttcctg
gatgttttgagttaggacctttttgcattttgcattttctttgattgttg
tgcccttgttctctatggaatcttctgcacctgagattctttcttccatc
tcttgtattctgttgctgatgcttgcatctatgattccagatttctttac
tagggtttctatctccagctttgtctcactttgggttttctttattgttt
ctacttccctttttaggtcttggatagttttgttcaattttatcccctgt
ttggttgtgttttcctgtatttctttaaggacttctacctctttagcagt
gttctcctttatttctttaagtgagttattaaagtccttcttgatgtcct
ctaccagcatcacgagatatgattttaaatctgagtcttgcttttcgggt
atgttggggtatccaggactgggtgaggtgggattgctgggttctgatga
tggtgagtggtcttgatttctgttagtaggattcttacatttgcctttca
ccatctagtaatcttggagttagttgctatagttgtctctggttggaact
tgttcctcctgtgattctgttagcctctaccagcagacctgagagactag
ctctctcctgagtctcagtggtcagagtactctctgcaggtaagctctcc
tcttgcaggaaggtgcacagatatctggcatttggacctgcctccttgct
cgagatgaaggcctgaaacagagcctgtcccagaagatgtgttgcctctg
c
gaattctttttctggtcccatctgtttggtgttctgtaaacttcttaaaa
gtttatgggcatctctttgtttaggttagggaagttttcttccataactt
tgttgaagatgtttgctggccttttaacttgggaatatttaccttctcct
atacctattatcttctggttcagggttttcattctgttttaaatttcttt
aatgtttttattttgaagctttctggtttttttccttgactagtgtatca
atgtcttttatgatatcttgttgctgctgagattctcttccatctctagt
attctgttgatgatgcctgcagctgtgactcctgtactttttccaaggtt
ttccatctccagggctgtcttactttttgttttctttcatgattctattt
ctatttttatatcctggacacttttgtttaattccttcacctgattgtgt
tttcctgtatttctttaagggatttatgtgtttcctatttaaggaattct
ctttatttacttatgttctcctgtatttcttttcttttcttttcttgttt
gtttgttttggtttttttgttttgtttttcgagacagggtttctctgtac
aaccctgactgtcctggaactcattttgtagaccaggctggccttgaact
cagaaatccgccttcctctgcctcccaagtgctgggattaaaggagtgca
ccaatgtcctctattagcttcatgaaatgagagattagatctgactcttg
ctttattggtgtgttggggtgtccaggacttgctgtggtggaagaactgg
gtcctgatgtgaccaagtaaaattggtttctgttacttgtgctcttatga
ttgcctcttgacatctggttttctctagtgctatctcaccgccctgtctc
ttactggagcctgtccttactgggatcctgtgatcctgccacccagtgat
ctatatgtgtcagataccctggggagtggagttgcaactagggtattgct
gtggtgggtcaaattctagttcatagacttctcctcctggctctggctgg
gccaggaatctgtgttctgggtttacaggggtctgatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144273282_144273834
seq2: B6Ng01-107F22.b_44_597 (reverse)

seq1  GTAGAAGACATCAAGAAGGACTTTAATAACTCTCTTAAATAAATACAGGA  50
      ||||| |||||||||||||||||||||||||| |||||| ||||| ||||
seq2  GTAGAGGACATCAAGAAGGACTTTAATAACTCACTTAAAGAAATAAAGGA  50

seq1  GAACACTGCTAAAGAGTTGCAAGTCCTTAAAGAAAAACAGGAAAACAC-A  99
      |||||||||||||||| |  ||||||||||||||| |||||||||||| |
seq2  GAACACTGCTAAAGAGGTAGAAGTCCTTAAAGAAATACAGGAAAACACAA  100

seq1  TCAAACAGGTGATGGAAATGAACAAAACTATACTAGACCTAAAAAGGAAA  149
       |||||||| |||  || ||||||||||||| | ||||||||||||| ||
seq2  CCAAACAGGGGATAAAATTGAACAAAACTATCCAAGACCTAAAAAGGGAA  150

seq1  GTAGAAACAATAAAGAAAACCCAAAGTGAGGCAACGCTGGAGATAGAAAA  199
      |||||||||||||||||||||||||||||| ||| |||||||||||||| 
seq2  GTAGAAACAATAAAGAAAACCCAAAGTGAGACAAAGCTGGAGATAGAAAC  200

seq1  CCTAGGAAAGAAATCTGGAACCATAGATGTGAGCATCAGCAACAGAATAC  249
      ||||| |||||||||||||| ||||||||  |||||||||||||||||||
seq2  CCTAGTAAAGAAATCTGGAATCATAGATGCAAGCATCAGCAACAGAATAC  250

seq1  AAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAACATC  299
      ||||||||||||| ||||||||||||||||||||||||||||||||||  
seq2  AAGAGATGGAAGAAAGAATCTCAGGTGCAGAAGATTCCATAGAGAACAAG  300

seq1  GACACAACAGTCAAAGAAAATACAAAATGCAAAAGGATCCTAACTCAAAA  349
      | ||||||| ||||||||||| |||||||||||| | |||||||||||||
seq2  GGCACAACAATCAAAGAAAATGCAAAATGCAAAAAGGTCCTAACTCAAAA  350

seq1  CATCCAGGAAATCCTGGATACAATGAGAAGACCAAACCTATGGATAATAG  399
      |||||||||| ||| ||| |||||||||||||||||||||  ||||||||
seq2  CATCCAGGAACTCCAGGACACAATGAGAAGACCAAACCTACAGATAATAG  400

seq1  GAGTAGATGAGAATGAAGATTTTCAACTTAAAGGGCCAGCAAATATCTCC  449
      | |||||||||||||||| ||||||||||||||||||| ||||||||| |
seq2  GGGTAGATGAGAATGAAGCTTTTCAACTTAAAGGGCCAACAAATATCTTC  450

seq1  AACAAAATTATAGAAGAAAATTTCCCAAACCTAAAGAAAGAGATGCCCAT  499
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  AACAAAATTTTAGAAGAAAACTTCCCAAACCTAAAGAAAGAGATGCCCAT  500

seq1  GAACATACAAGAAGCCTACAGAACTCCAAATAGACTGAACCAGAAAAGAA  549
      |||||||||||||||||||||| |||||||||||||| |||||||||| |
seq2  GAACATACAAGAAGCCTACAGAGCTCCAAATAGACTGGACCAGAAAAGGA  550

seq1  ATTC  553
      ||||
seq2  ATTC  554

seq1: chr4_96135091_96136132
seq2: B6Ng01-107F22.g_111_1151

seq1  AAGTTTATGGGCATCTCTTTGTTTAGGTTAGGGAAGTTTTCTTCCATAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATGGGCATCTCTTTGTTTAGGTTAGGGAAGTTTTCTTCCATAAC  50

seq1  TTTGTTGAAGATGTTTGCTGGCCTTTTAACTTGGGAATATTTACCTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAAGATGTTTGCTGGCCTTTTAACTTGGGAATATTTACCTTCTC  100

seq1  CTATACCTATTATCTTCTGGTTCAGGGTTTTCATTCTGTTTTAAATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCTATTATCTTCTGGTTCAGGGTTTTCATTCTGTTTTAAATTTCT  150

seq1  TTAATGTTTTTATTTTGAAGCTTTCTGGTTTTTTTCCTTGACTAGTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTTTTATTTTGAAGCTTTCTGGTTTTTTTCCTTGACTAGTGTAT  200

seq1  CAATGTCTTTTATGATATCTTGTTGCTGCTGAGATTCTCTTCCATCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTTTTATGATATCTTGTTGCTGCTGAGATTCTCTTCCATCTCTA  250

seq1  GTATTCTGTTGATGATGCCTGCAGCTGTGACTCCTGTACTTTTTCCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTGTTGATGATGCCTGCAGCTGTGACTCCTGTACTTTTTCCAAGG  300

seq1  TTTTCCATCTCCAGGGCTGTCTTACTTTTTGTTTTCTTTCATGATTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATCTCCAGGGCTGTCTTACTTTTTGTTTTCTTTCATGATTCTAT  350

seq1  TTCTATTTTTATATCCTGGACACTTTTGTTTAATTCCTTCACCTGATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTTATATCCTGGACACTTTTGTTTAATTCCTTCACCTGATTGT  400

seq1  GTTTTCCTGTATTTCTTTAAGGGATTTATGTGTTTCCTATTTAAGGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTGTATTTCTTTAAGGGATTTATGTGTTTCCTATTTAAGGAATT  450

seq1  CTCTTTATTTACTTATGTTCTCCTGTATTTCTTTTCTTTTCTTTTCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTTACTTATGTTCTCCTGTATTTCTTTTCTTTTCTTTTCTTGT  500

seq1  TTGTTTGTTTTGGTTTTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTTGGTTTTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGT  550

seq1  ACAACCCTGACTGTCCTGGAACTCATTTTGTAGACCAGGCTGGCCTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCTGACTGTCCTGGAACTCATTTTGTAGACCAGGCTGGCCTTGAA  600

seq1  CTCAGAAATCCGCCTTCCTCTGCCTCCCAAGTGCTGGGATTAAAGGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATCCGCCTTCCTCTGCCTCCCAAGTGCTGGGATTAAAGGAGTG  650

seq1  CACCAATGTCCTCTATTAGCTTCATGAAATGAGAGATTAGATCTGACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATGTCCTCTATTAGCTTCATGAAATGAGAGATTAGATCTGACTCT  700

seq1  TGCTTTATTGGTGTGTTGGGGTGTCCAGGACTTGCTGTGGTGGAAGAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATTGGTGTGTTGGGGTGTCCAGGACTTGCTGTGGTGGAAGAACT  750

seq1  GGGTCCTGATGTGACCAAGTAAAATTGGTTTCTGTTACTTGTGCTCTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTGATGTGACCAAGTAAAATTGGTTTCTGTTACTTGTGCTCTTAT  800

seq1  GATTGCCTCTTGACATCTGGTTTTCTCTAGTGCTATCTCACCGCCCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCTCTTGACATCTGGTTTTCTCTAGTGCTATCTCACCGCCCTGTC  850

seq1  TCTTACTGGAGCCTGTCCTTACTGGGATCCTGTGATCCTGCCACCCAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTGGAGCCTGTCCTTACTGGGATCCTGTGATCCTGCCACCCAGTG  900

seq1  ATCTATATGTGTCAGAATACCCTGGGGAGTTGAGTTGCAACTAGGGTATT  950
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  ATCTATATGTGTCAG-ATACCCTGGGGAGTGGAGTTGCAACTAGGGTATT  949

seq1  GGCTGT-GTGGGTTCAAATCTAGATCATAGAC-TCTGCTCCTGGCTCTGG  998
       ||||| ||||||  || ||||| |||||||| ||| |||||||||||||
seq2  -GCTGTGGTGGGTCAAATTCTAGTTCATAGACTTCTCCTCCTGGCTCTGG  998

seq1  CTGGGCGAGGAATCTGTGTTCTGGGGTTACAGGTGTTCTGATAC  1042
      |||||| |||||||||||||||||| ||||||| | ||||||||
seq2  CTGGGCCAGGAATCTGTGTTCTGGGTTTACAGG-GGTCTGATAC  1041