BAC Information

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BAC

Clone NameB6Ng01-107F23
Chromosome1 (Build37)
Map Location 70,239,224 - 70,240,406
singlet/doubletsinglet
Overlap geneSpag16
Upstream geneEG241084, Ikzf2
Downstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107F23.bB6Ng01-107F23.g
ACCDH914857DH914858
length5431,175
definitionDH914857|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F23, 5' end.DH914858|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctgtttttattcaaatagtgttaggaagaaagtttaaggagattgcttta
gttgttttggcagaaaattgtaataatgttagaatcaataatagaatgtg
cccctcctcccagaatagtaagtaatggctacatacttagaatacaatga
gctttcatacattgcactaagaagagaaagaggcttgggatgaatttgtg
atggaggaaaactttgattcattctaggtcaggtccaaggatcaggctat
ggatgtgtactataataaagcaagaccctgtagaactgttgctttgaact
tataatgaacttgtagaatgaaacactgctctgaacttactatctacgtt
tttgtaactccctttttatgtaacattgtatctgtgacataattttataa
agaatttttttctaaaaaggtataaaaatgctgagagaggagaggcccct
tgatcttacaaactttatatgccacagtacaggggaatgccagggccagg
aagtgggagtgggcaggttggggagcagggttgggggaggtta

gaattcatcttagttatgaacttcaagtgaactattttttttcatccaga
aagtaatcaaatgatcaagtgcttttattggaggccttttaaaaaataca
ttacatgaattcttaagtgttatgccattgttttgatgattcaattggat
tttcaaaagcatgtctactcaactgatcttggtaagaatcaaacagaaaa
tagaagaagatgcccatgtatccatctctcttctagaacagatatgattc
tagaaagcgacggagaattgaataacctatgtaggataataaattgtaat
tctgcacagaaattgggaagtgatatgggagtggccactttaccatgacc
acataaacatttgtcagatccccaaatgtatgagaacatgaacctaagca
gagaggccagtgtagaacttagcctttcaatattcatgataccttgctgc
agttcaggaagcaaaagatgaagcaatcctgatgcagaaaactaactatt
ccatgtgtctagtgctgggctacactgtggaactgagcacttcagtaaca
ccctccaggggaaagatttttgaacctcctcaaaggacgaggatttcaga
agactggtgattagatgtataaatcacatgaaagtaatgtttttagtgtt
tctaattagataattcccatgtaagattaggaactggaaatgaagagcac
tatgaaaatcgcaacaaattccaccatcacagggttatgactcccaagag
ctgcagacgggttttcatgaaatcatgcatccctcctgaggttaactctc
taaggatcaagaattgtctctattaccaaataaggatctcctcacacagc
agaactagtttgtaagtcactagttcaaaaattagaaataaatgagtaga
ctgggttgtttgaacaatcatgttccaatataaatggaaaatagaaatat
gatttatgttgggaaaatttaaaatctgtaaacagaatgaggtacatgac
taccagcagtgtcccgtgtagattatatcaataatatggtattaagacca
tactgtgtctttgccttcagaaggcatatagtagttcaatataatatagg
ataagataaggatttgaaatcattattgttttaccctttcaggaaatttt
tgtaatagaaaaccatttaggtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70239224_70240406
seq2: B6Ng01-107F23.g_64_1238 (reverse)

seq1  GTCAACTAAATATGTTTTTCTATTACAAAATATTCTTTTAAAAGGGGGAC  50
      |||| ||||  ||| |||||||||||||||  ||| |    || ||| | 
seq2  GTCACCTAA--ATGGTTTTCTATTACAAAAATTTCCT---GAAAGGGTAA  45

seq1  AACATATATGATTTCAAATCCTAATTCTATCCTATATTATATTGAACTAC  100
      ||||   ||||||||||||||| ||  |||||||||||||||||||||||
seq2  AACAATAATGATTTCAAATCCTTATCTTATCCTATATTATATTGAACTAC  95

seq1  TATAATGCCTTCTGAAGGCAAAGACACAGTAATGGTCTTAATTACATATT  150
      ||| |||||||||||||||||||||||||| |||||||||||  ||||||
seq2  TAT-ATGCCTTCTGAAGGCAAAGACACAGT-ATGGTCTTAATACCATATT  143

seq1  ATTGATAATATTCTACACGTGACACTGCTGGTAGTCATGTTACCTCATTC  200
      |||||| ||| |||||||| ||||||||||||||||||| ||||||||||
seq2  ATTGAT-ATAATCTACACGGGACACTGCTGGTAGTCATG-TACCTCATTC  191

seq1  TGTTTTACAGATTTTTAAATTTTCCAACATAAATCATATTTCTATTTTCC  250
      || |||||||||||| || ||| |||||||||||||||||||||||||||
seq2  TG-TTTACAGATTTTAAATTTTCCCAACATAAATCATATTTCTATTTTCC  240

seq1  ATTTATATTGGAACATGATTGTTCAAACAA-CCAGTCTACTCATTTATTT  299
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTTATATTGGAACATGATTGTTCAAACAACCCAGTCTACTCATTTATTT  290

seq1  CTAATTTTTGAACTAGTGACTTACAAACTAGTTCTGCTGTGTGAGG-GAT  348
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTAATTTTTGAACTAGTGACTTACAAACTAGTTCTGCTGTGTGAGGAGAT  340

seq1  CCTTATTTGGTAATAGAGACAATTCTTGATCCTTAGAGAGTTAACCTCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTGGTAATAGAGACAATTCTTGATCCTTAGAGAGTTAACCTCAG  390

seq1  GAGGGATGCATGATTTCATGAAAACCCGTCTGCAGCTCTTGGGAGTCATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATGCATGATTTCATGAAAACCCGTCTGCAGCTCTTGGGAGTCATA  440

seq1  ACCCTGTGATGGTGGAATTTGTTGCGATTTTCATAGTGCTCTTCATTTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTGATGGTGGAATTTGTTGCGATTTTCATAGTGCTCTTCATTTCC  490

seq1  AGTTCCTAATCTTACATGGGAATTATCTAATTAGAAACACTAAAAACATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTAATCTTACATGGGAATTATCTAATTAGAAACACTAAAAACATT  540

seq1  ACTTTCATGTGATTTATACATCTAATCACCAGTCTTCTGAAATCCTCGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATGTGATTTATACATCTAATCACCAGTCTTCTGAAATCCTCGTC  590

seq1  CTTTGAGGAGGTTCAAAAATCTTTCCCCTGGAGGGTGTTACTGAAGTGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGAGGTTCAAAAATCTTTCCCCTGGAGGGTGTTACTGAAGTGCT  640

seq1  CAGTTCCACAGTGTAGCCCAGCACTAGACACATGGAATAGTTAGTTTTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCACAGTGTAGCCCAGCACTAGACACATGGAATAGTTAGTTTTCT  690

seq1  GCATCAGGATTGCTTCATCTTTTGCTTCCTGAACTGCAGCAAGGTATCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGGATTGCTTCATCTTTTGCTTCCTGAACTGCAGCAAGGTATCAT  740

seq1  GAATATTGAAAGGCTAAGTTCTACACTGGCCTCTCTGCTTAGGTTCATGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTGAAAGGCTAAGTTCTACACTGGCCTCTCTGCTTAGGTTCATGT  790

seq1  TCTCATACATTTGGGGATCTGACAAATGTTTATGTGGTCATGGTAAAGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACATTTGGGGATCTGACAAATGTTTATGTGGTCATGGTAAAGTG  840

seq1  GCCACTCCCATATCACTTCCCAATTTCTGTGCAGAATTACAATTTATTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTCCCATATCACTTCCCAATTTCTGTGCAGAATTACAATTTATTAT  890

seq1  CCTACATAGGTTATTCAATTCTCCGTCGCTTTCTAGAATCATATCTGTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATAGGTTATTCAATTCTCCGTCGCTTTCTAGAATCATATCTGTTC  940

seq1  TAGAAGAGAGATGGATACATGGGCATCTTCTTCTATTTTCTGTTTGATTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAGAGATGGATACATGGGCATCTTCTTCTATTTTCTGTTTGATTC  990

seq1  TTACCAAGATCAGTTGAGTAGACATGCTTTTGAAAATCCAATTGAATCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAGATCAGTTGAGTAGACATGCTTTTGAAAATCCAATTGAATCAT  1040

seq1  CAAAACAATGGCATAACACTTAAGAATTCATGTAATGTATTTTTTAAAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATGGCATAACACTTAAGAATTCATGTAATGTATTTTTTAAAAG  1090

seq1  GCCTCCAATAAAAGCACTTGATCATTTGATTACTTTCTGGATGAAAAAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAATAAAAGCACTTGATCATTTGATTACTTTCTGGATGAAAAAAA  1140

seq1  ATAGTTCACTTGAAGTTCATAACTAAGATGAATTC  1183
      |||||||||||||||||||||||||||||||||||
seq2  ATAGTTCACTTGAAGTTCATAACTAAGATGAATTC  1175


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