BAC Information

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BAC

Clone NameB6Ng01-107L07
Chromosome1 (Build37)
Map Location 193,977,090 - 193,977,208
singlet/doubletsinglet
Overlap genenone
Upstream gene4933417M04Rik, Atf3, Nenf, 2310028N02Rik, Ppp2r5a, LOC100039501, LOC667044, Dtl, Ints7, Lpgat1, Nek2, 4930557M11Rik, Slc30a1, 3322402L07Rik, LOC100042611, Traf5, Traf5, LOC100042625, Rcor3
Downstream geneKcnh1, Hhat, A730013G03Rik, Sertad4, LOC100039677, Syt14, AA408296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107L07.bB6Ng01-107L07.g
ACCDH915096DH915097
length4591,228
definitionDH915096|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L07, 5' end.DH915097|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aatctctattgggtccctcccctcagaattcagggaacctcagggaaaaa
agagaggaagtactttaggtgcccaggaccagccttggcataaaaagggt
ctctgagaaacaggttctggagctctaggagtgtcgaaaagaaagggctc
aagattcaaatcttgggtccaagttgacagcctatgatctgctgagatgt
ctttccagtcttgcccccccactccctcgctccctccctctctcccacct
gtttctgtctctctatgtgtctttttctgtatgtgtctctgtctctatct
ctctcgttgtgaatgcagttttgagttgtgtgtgtgtatgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtctgtttgtatgagttctgctctact
ctagacagctttttcttgttattctagatactttctgggtgaaacagctc
tctctgcca
gaattcagataactctaaaaaagctgtaaaagacatgtgtaaaaaaatca
aggtattccaaaaagaaatcgaataagatatcagaagataaaaaaactca
atgctcattgattattagaattaatgtagtgaaaatcatcattgtaccaa
aagcaatatatagattcagtgcaatcctaaagaaagccccaacacacttt
tccactaaattgaaaaacaaaatttcagtttcatagtaaaacacacacac
acacacacacacacacacacacacacacacacacacacacacacataaag
gaaataaaaaaagagaaacaagcaataaaaataattgaaaacacagaaaa
tatgaatagataaaataattctgaatactaaaaactgctggaagtatcac
cacttcagatttcaagttatcttacacatttaaagtaacaaaatatcaag
tctttgccataaaaatagacacaagtatcaatggagtacaactgaaaaca
tagacataattccaagccactatacacttctgatttttagcaaagaatcc
aaaagtacagactagaaaagagacatcatcttcaacaaatggttgacatc
aatctgaatgactgtagatagaagaaaatagaaacatgcttgctatgcta
tacaaaactcaactacaaatggaaaaaatataacttccgcataaggcaag
atacactgatcctgatagaagataaagtgagaaatagtattgaatgattt
gacaaaggaaaatattctaaacaagacatttgtaacccaggcaataagaa
caagaattaataaatcaaagcttatgaaactaaaaggcaaaaacccagca
tcattcagaagcaaaggaagcacacggaatgggaaaattattactatcca
cacatctgatagaaggcaaaaggaccaacggtttctccttttattgatgc
cagacatgccatcctctgctacatatgcaactgggacatggcccctcatc
atactctttggtttctgtttagtctctggagctggggcggggatctagtg
tgatactgttgttttctgatgggtgcaaaccccttcagctctcagtcttt
cctactcctcgttggaactcatgcaagacatgttgtgcagacacctgcac
tgattctcgaacttgcaagcctctcaggatccttaaccgccctctctaca
agctcttggacgtctacataatataggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_193977090_193977208
seq2: B6Ng01-107L07.b_405_514 (reverse)

seq1  TGGCAGAGAGAGCTGTTTAAGTTATGGTGTCACAAAACAGAGAGGGGACA  50
      |||||||||||||||||            ||||    |||| ||     |
seq2  TGGCAGAGAGAGCTGTT------------TCAC---CCAGAAAGTATCTA  35

seq1  GA--GAC-AGAGAGAGACAAACAGAG-AGACAAAGAGTC--AGAGACAGA  94
      ||   || ||| | ||      |||| |||  |  | ||  | | |||||
seq2  GAATAACAAGAAAAAGCTGTCTAGAGTAGAGCAGAACTCATACAAACAGA  85

seq1  CACACACACACACACACACACACAC  119
      |||||||||||||||||||||||||
seq2  CACACACACACACACACACACACAC  110