BAC Information

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BAC

Clone NameB6Ng01-107L22
Chromosome1 (Build37)
Map Location 106,476,426 - 106,477,477
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383546
Downstream geneLOC100041134, Cdh20, Rnf152, LOC100041985, Pign
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107L22.bB6Ng01-107L22.g
ACCDH915122DH915123
length1,1311,027
definitionDH915122|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L22, 5' end.DH915123|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaacttctttccttatttcttccccgatccagagatcattga
gtagagagttgttcaatctctaggattgtgtagggtttgtggtatatatg
ttgttgttaaagtccatctttaattcataatggcatgataagatatttca
attttcttatatctgttgaggctttctttgggacaggctacatgattaat
tttgtagaaggaactatgaggtgttgggaagaatatatattcttttgtgt
ttgagtgaaatattctacaaatgtctgttaggtccttttgattcataatg
tcttttagtttcattacttctctgtttagtttttgtctggataacctgtt
agttggtgagagtggggcgttgaagtcttacactatgaatatgtggagtc
gatgtcaaatttaagctttagcaatgtttcttttacaaatgaggattcct
ttgtgtttggagcggagatgttcagaatcacggtattgtcctggtagatt
tttcttttgatgagtatgaaatgtgctctcctgtatgttctgagtaactt
ttgttgatagtcttttattagatattagaatggctactccacccacactc
ccaaaatctattctatttccactttgtggagagatccatgcattttcagt
agacctctcctttttattttacttttctggatctgtagattatagtgtga
ttatcttttacttagcagctagtacaaacttacaagtgagtttcatatca
tatttgtctttctaagtttgggtggcctcactcagcatttttttttctag
cttcttatacttgcctgcaaatttcatgatttttcttttttcttacagtt
gagtagtagtccattgtgtaaatgtaccacatatttgttttatccattca
tcagttgagggacattttggttgtcttcatattcttggacattatcaata
aagctactaattaaatattaaaaggatactattaaaagtatccttgtact
agatgagacacttttgggtatatagcactggtgtagattagcccttaaaa
agtttggtccctatagatgcccttgatggaatagggtggaacttgttggg
aaaagatgggtgaactgtggggggttggcct
gaattcagtcctcaggacccattcacatactggaaggggagaaccactgt
ctgcaagttgtcctccaacctccacatgaatgctatcacagacacacata
gatccagacacagacacagacagacacagacagacagacagacagacaga
cacacacacacacacacacacacacacacactaaatatagataagtaagt
aaataaataaattcaataaaaataaggaagtaggggaatctaccaaggtc
acaagaggaatattttaagaaactgttctaaatgtcacaaaggggaataa
ttatactaatttctgccaactctctagcataagaaagttgccctcagatc
cttggagcttacctcttgcagctcattgttttctagcttgcttctttagt
ctgcaactacagccattgagatggaaccctgaagggacagaaaagaggct
tctaacatagccacatgatctgcagaaagatattcagaacatgtgatctg
tcttttgcttctacttagaactgtgaaagagaccactgaagcatgggaat
aactcaaaggagcagcaaccaatactggcacagctgctaacaagaagtgt
ataatttatctattactgtagcaagaaaacccaggctgacttaaaaacac
ccatatttatctcctcagtgatgtacaggccttaattgcttcccctgctt
cagagtctctcaaaagactgataccaagttattacctagtctgatgtctc
accttcaggttcaactgtggattaatcctcttctgaacctatacaagttg
aggtcagggcctccattcttattttatggcttgcagctacttatggtttg
gtcatatgatccttccaacatagagcagtgtacaccatgacagtttgtgc
cattaaatctagcactctaaaatgaagagagtatgctctctgtgacatcc
catcatcatcattattgtagtcattgtatgacagtcacagagcacccaca
ttcaggacgatgacaaggcagcatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_106476426_106477477
seq2: B6Ng01-107L22.g_66_1092

seq1  GAATTCAGTCCTCAGGACCCATTCACATACTGGAAGGGGAGAACCACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCTCAGGACCCATTCACATACTGGAAGGGGAGAACCACTGT  50

seq1  CTGCAAGTTGTCCTCCAACCTCCACATGAATGCTATCACAGACACACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGTTGTCCTCCAACCTCCACATGAATGCTATCACAGACACACATA  100

seq1  GATCCAGACACAGACACAGACAGACACAGACAGACAGACAGACAGACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGACACAGACACAGACAGACACAGACAGACAGACAGACAGACAGA  150

seq1  CACACACACACACACACACACACACACACACTAAATATAGATAAGTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACTAAATATAGATAAGTAAGT  200

seq1  AAATAAATAAATTCAATAAAAATAAGGAAGTAGGGGAATCTACCAAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATTCAATAAAAATAAGGAAGTAGGGGAATCTACCAAGGTC  250

seq1  ACAAGAGGAATATTTTAAGAAACTGTTCTAAATGTCACAAAGGGGAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGGAATATTTTAAGAAACTGTTCTAAATGTCACAAAGGGGAATAA  300

seq1  TTATACTAATTTCTGCCAACTCTCTAGCATAAGAAAGTTGCCCTCAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTAATTTCTGCCAACTCTCTAGCATAAGAAAGTTGCCCTCAGATC  350

seq1  CTTGGAGCTTACCTCTTGCAGCTCATTGTTTTCTAGCTTGCTTCTTTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGCTTACCTCTTGCAGCTCATTGTTTTCTAGCTTGCTTCTTTAGT  400

seq1  CTGCAACTACAGCCATTGAGATGGAACCCTGAAGGGACAGAAAAGAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACTACAGCCATTGAGATGGAACCCTGAAGGGACAGAAAAGAGGCT  450

seq1  TCTAACATAGCCACATGATCTGCAGAAAGATATTCAGAACATGTGATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACATAGCCACATGATCTGCAGAAAGATATTCAGAACATGTGATCTG  500

seq1  TCTTTTGCTTCTACTTAGAACTGTGAAAGAGACCACTGAAGCATGGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGCTTCTACTTAGAACTGTGAAAGAGACCACTGAAGCATGGGAAT  550

seq1  AACTCAAAGGAGCAGCAACCAATACTGGCACAGCTGCTAACAAGAAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAGGAGCAGCAACCAATACTGGCACAGCTGCTAACAAGAAGTGT  600

seq1  ATAATTTATCTATTACTGTAGCAAGAAAACCCAGGCTGACTTAAAAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTATCTATTACTGTAGCAAGAAAACCCAGGCTGACTTAAAAACAC  650

seq1  CCATATTTATCTCCTCAGTGATGTACAGGCCTTAATTGCTTCCCCTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTATCTCCTCAGTGATGTACAGGCCTTAATTGCTTCCCCTGCTT  700

seq1  CAGAGTCTCTCAAAAGACTGATACCAAGTTATTACCTAGGTCTGATGTCT  750
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGAGTCTCTCAAAAGACTGATACCAAGTTATTACCTA-GTCTGATGTCT  749

seq1  CACCTTCAGGTTCAACTGTGGATTAATCCTCTTCTGAACCTATACAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCAGGTTCAACTGTGGATTAATCCTCTTCTGAACCTATACAAGTT  799

seq1  GAGGTCAGGGCCTCCATTCTTATTTTATGGCTTGCAGCTACTTATGGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGGGCCTCCATTCTTATTTTATGGCTTGCAGCTACTTATGGTTT  849

seq1  GGTCATATGATCCTTCCAACATAGAGCAGTGTACACCATGACAGTTTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATATGATCCTTCCAACATAGAGCAGTGTACACCATGACAGTTTGTG  899

seq1  CCATTAAATCTAGCAACTCTAAAAATGAAAGAGAAGTTATGCTCTTCTGT  950
      |||||||||||||| ||||| |||||| ||||||   ||||||| |||||
seq2  CCATTAAATCTAGC-ACTCT-AAAATG-AAGAGA--GTATGCTC-TCTGT  943

seq1  GACATCCCATCATCCATCATTATTGTAGTTCATTTGTTAATGAGCAAGTC  1000
      ||||||||||||| |||||||||||||| ||| ||||  ||||   ||||
seq2  GACATCCCATCAT-CATCATTATTGTAG-TCA-TTGT--ATGA--CAGTC  986

seq1  ACAGAGGCAACCCACATTCAAGGGGACAGGATGACACAAGGGCAGGCATG  1050
      ||||||   |||||||||||   ||||  ||||||   | |||| |||||
seq2  ACAGAG--CACCCACATTCA---GGAC--GATGAC---AAGGCA-GCATG  1025

seq1  AC  1052
      ||
seq2  AC  1027