BAC Information

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BAC

Clone NameB6Ng01-107O22
Chromosome1 (Build37)
Map Location 164,658,491 - 164,809,578
singlet/doubletdoublet
Overlap geneBat2d, Fmo4, Fmo1, Fmo2
Upstream geneLOC269134, Fasl, AI848100, EG665109, Pigc, Dnm3, LOC100039703, Dnm3os, 5630401D24Rik, Vamp4, LOC435651, Myoc
Downstream geneFmo6, Fmo3, 4921528O07Rik, Prrx1, LOC100039597, Scyl1bp1, LOC665237, Gm207, LOC100039626, Kifap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107O22.bB6Ng01-107O22.g
ACCDH915256DH915257
length7591,084
definitionDH915256|Mus musculus domesticus DNA, BAC clone: B6Ng01-107O22, 5' end.DH915257|Mus musculus domesticus DNA, BAC clone: B6Ng01-107O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,808,820 - 164,809,578)(164,658,491 - 164,659,203)
sequence
tgcttctacctctcaagtggttccaggcctgtaatctcagcagtctagag
gcaggaggatggataagagttcaagggcagcctgggctccatagcaagtt
cagtacagctaaggcttctaggaagactttcttgaaagtaaagaagaaag
ggggtgcaaagggagggatggaggaaagagaaagagaagaaaaatataaa
taggttcgtcccaaatcatgtgcgcctaaggactctgaccctttagggag
ccgtccagattaagtgtggcctgaaaacctggactctgcatcttagaaag
ctcttaagtcagagacaccagggagcggattatactgaaagaataagatt
tgtctcctttgcatttaaggtaatcccatcagtagttgggaacacagatt
taataatcagggatagaactcaaagaccactgagaaagcaccagcactca
cctgtgctaaagtacaatgcagcccggaccagagctgagagacaaagtgg
aaacaagaacaaatgtgttagaggtgtcaaggataggggcagaagagcgt
gctttgtgattcaacataggaaaggagaagaatcgtggacccagtactgg
agactggctgtggctgagaatagaggcaggagggtctcaatggcagcctc
agctttggactactaatgtctgagatcctagatgtctgcccacatgcaag
aatatggacatctttcccatctgaagcctgcaggacacttgagtgtggga
gatgggggg
gaattcctgacttgatttaaatcgttttaggaatttggtgtggttgataa
agactcaggagatggtttcagttgctttgccaggaagatgaatcaaagaa
ccaacagtagacagactgtgcccttctctgcagagcagtgagggctgtct
aggctagaaagggagccccgtgacctctcaagccctgcgagcgcagagtg
ggacttgagaaaggaacagaggtttgagacaagttaatacgcaaagaaaa
cattcacttgttctaggttgagttcgttaatcttgtgatctaaggatgtg
gtcacaggttttagtgtgcaccatgggaaggtagaacagatgatagtcta
gctatgtaaggcttcaaaaaaaatatgtaaaaaaaattggtttcttggta
aatgaaactgttgtcagctaacagaaaaattagctacaatagagctggca
tgtttaaaattgttaatcaacgacaaaagaattattgctttgggttaaga
tgaatttgtgcaaagatagatggaaaatgttcagtaaggtttgggtttca
aaagaatatatagtcagtcatcatgcaattcccctcagtgtaatgatttt
aatctgtttttgaagaatacgtttttctggtgattttttttttttttttg
agaatatgtaacttgtagctataaggtgatcttatgttgagaatttttgt
cttaggtgatatataaaggagtaagagaaaaagcaaagttgttagagcct
tgcttcatccaccaagtgtgtgtatgtttccccctcttcattggccacag
agaattaagtcttgctcccccagagaaaagactgagttgcagagtacaca
cccagcctcagcacctgagatgtgaagctgggctttggaaaagcttattc
ctctcttaaaaaattgtaggactaaaaaagtgacaccttctcacaaatta
gttctctcctcaatttctagagtatttttctcttatctttagtctaaccc
actaaacctttgggattagattctccaagtataaacatatggactatatt
taattagcagtattggaccacctttcaagagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_164808820_164809578
seq2: B6Ng01-107O22.b_63_821 (reverse)

seq1  CCCCCCATCTCCCACACTCAAGTGTCCTGCAGGCTTCAGATGGGAAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCATCTCCCACACTCAAGTGTCCTGCAGGCTTCAGATGGGAAAGAT  50

seq1  GTCCATATTCTTGCATGTGGGCAGACATCTAGGATCTCAGACATTAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATATTCTTGCATGTGGGCAGACATCTAGGATCTCAGACATTAGTAG  100

seq1  TCCAAAGCTGAGGCTGCCATTGAGACCCTCCTGCCTCTATTCTCAGCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGCTGAGGCTGCCATTGAGACCCTCCTGCCTCTATTCTCAGCCAC  150

seq1  AGCCAGTCTCCAGTACTGGGTCCACGATTCTTCTCCTTTCCTATGTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTCTCCAGTACTGGGTCCACGATTCTTCTCCTTTCCTATGTTGAA  200

seq1  TCACAAAGCACGCTCTTCTGCCCCTATCCTTGACACCTCTAACACATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGCACGCTCTTCTGCCCCTATCCTTGACACCTCTAACACATTTG  250

seq1  TTCTTGTTTCCACTTTGTCTCTCAGCTCTGGTCCGGGCTGCATTGTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTTCCACTTTGTCTCTCAGCTCTGGTCCGGGCTGCATTGTACTT  300

seq1  TAGCACAGGTGAGTGCTGGTGCTTTCTCAGTGGTCTTTGAGTTCTATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGGTGAGTGCTGGTGCTTTCTCAGTGGTCTTTGAGTTCTATCCC  350

seq1  TGATTATTAAATCTGTGTTCCCAACTACTGATGGGATTACCTTAAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTAAATCTGTGTTCCCAACTACTGATGGGATTACCTTAAATGCA  400

seq1  AAGGAGACAAATCTTATTCTTTCAGTATAATCCGCTCCCTGGTGTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACAAATCTTATTCTTTCAGTATAATCCGCTCCCTGGTGTCTCTG  450

seq1  ACTTAAGAGCTTTCTAAGATGCAGAGTCCAGGTTTTCAGGCCACACTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGAGCTTTCTAAGATGCAGAGTCCAGGTTTTCAGGCCACACTTAA  500

seq1  TCTGGACGGCTCCCTAAAGGGTCAGAGTCCTTAGGCGCACATGATTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACGGCTCCCTAAAGGGTCAGAGTCCTTAGGCGCACATGATTTGGG  550

seq1  ACGAACCTATTTATATTTTTCTTCTCTTTCTCTTTCCTCCATCCCTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACCTATTTATATTTTTCTTCTCTTTCTCTTTCCTCCATCCCTCCCT  600

seq1  TTGCACCCCCTTTCTTCTTTACTTTCAAGAAAGTCTTCCTAGAAGCCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCCCCTTTCTTCTTTACTTTCAAGAAAGTCTTCCTAGAAGCCTTA  650

seq1  GCTGTACTGAACTTGCTATGGAGCCCAGGCTGCCCTTGAACTCTTATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACTGAACTTGCTATGGAGCCCAGGCTGCCCTTGAACTCTTATCCA  700

seq1  TCCTCCTGCCTCTAGACTGCTGAGATTACAGGCCTGGAACCACTTGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCCTCTAGACTGCTGAGATTACAGGCCTGGAACCACTTGAGAG  750

seq1  GTAGAAGCA  759
      |||||||||
seq2  GTAGAAGCA  759

seq1: chr1_164658491_164659203
seq2: B6Ng01-107O22.g_459_1150

seq1  TCTTGGTAAATGAAACTGTTGTCAGCTAACAGAAAAATTAGCTACAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTAAATGAAACTGTTGTCAGCTAACAGAAAAATTAGCTACAATAG  50

seq1  AGCTGGCATGTTTAAAATTGTTAATCAACGACAAAAGAATTATTGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCATGTTTAAAATTGTTAATCAACGACAAAAGAATTATTGCTTTG  100

seq1  GGTTAAGATGAATTTGTGCAAAGATAGATGGAAAATGTTCAGTAAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGATGAATTTGTGCAAAGATAGATGGAAAATGTTCAGTAAGGTTT  150

seq1  GGGTTTCAAAAGAATATATAGTCAGTCATCATGCAATTCCCCTCAGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCAAAAGAATATATAGTCAGTCATCATGCAATTCCCCTCAGTGTA  200

seq1  ATGATTTTAATCTGTTTTTGAAGAATACGTTTTTCTGGTGATTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTAATCTGTTTTTGAAGAATACGTTTTTCTGGTGATTTTTTTTT  250

seq1  TTTTTTTGAGAATATGTAACTTGTAGCTATAAGGTGATCTTATGTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGAATATGTAACTTGTAGCTATAAGGTGATCTTATGTTGAGA  300

seq1  ATTTTTGTCTTAGGTGATATATAAAGGAGTAAGAGAAAAAGCAAAGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCTTAGGTGATATATAAAGGAGTAAGAGAAAAAGCAAAGTTGT  350

seq1  TAGAGCCTTGCTTCATCCACCAAGTGTGTGTATGTTTCCCCCTCTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCTTGCTTCATCCACCAAGTGTGTGTATGTTTCCCCCTCTTCATT  400

seq1  GGCCACAGAGAATTAAGTCTTGCTCCCCCAGAGAAAAGACTGAGTTGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAGAGAATTAAGTCTTGCTCCCCCAGAGAAAAGACTGAGTTGCAG  450

seq1  AGTACACACCCAGCCTCAGCACCTGAGATGTTGAAGCTGGCCTTTGGAAA  500
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  AGTACACACCCAGCCTCAGCACCTGAGATG-TGAAGCTGGGCTTTGGAAA  499

seq1  AGCTTATTCCTCTCTTAAAAAATTGTAAGGACTTAAAAAAGGTGACACCT  550
      |||||||||||||||||||||||||| ||||||  ||||| |||||||||
seq2  AGCTTATTCCTCTCTTAAAAAATTGT-AGGACT--AAAAAAGTGACACCT  546

seq1  TCTCCACAAATAAGTTCTTCTCCCCCAATTTCTAAGAGTA-TTTTCTCTT  599
      ||| ||||||| ||||| ||| || |||||||| |||||| |||||||||
seq2  TCT-CACAAATTAGTTC-TCT-CCTCAATTTCT-AGAGTATTTTTCTCTT  592

seq1  ATCTCTAGTCTTAAACACCACTAAA-CTTTGGTATTAGATTCTCACACTT  648
      |||| ||||||  ||| |||||||| |||||| ||||||||||| ||  |
seq2  ATCTTTAGTCT--AAC-CCACTAAACCTTTGGGATTAGATTCTC-CAAGT  638

seq1  ATAAACATTATTGAACTATATTCTAATTTAGCAATGTATTTTGGGACCCA  698
      ||||||||   || |||||||| ||| ||||||  |||||   ||| |||
seq2  ATAAACAT--ATGGACTATATT-TAA-TTAGCA--GTATT---GGA-CCA  678

seq1  CCTTTCAAAAAGCTA  713
      |||||| || |||||
seq2  CCTTTC-AAGAGCTA  692