BAC Information

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BAC

Clone NameB6Ng01-107P01
Chromosome1 (Build37)
Map Location 61,720,249 - 61,720,801
singlet/doubletsinglet
Overlap genePard3b
Upstream geneEif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107P01.bB6Ng01-107P01.g
ACCDH915260DH915261
length1,1001,002
definitionDH915260|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P01, 5' end.DH915261|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtaaaaccatatgaaccagggcttctttggttgggagattt
ttaaataactgcttctatttccttaggggttataggtctatttatatttt
atcttatttgatcctgttttaactttgataacttctgtctatcaatcaag
aaaactacttatttctttcatattttccaattctgtgggagtataggttt
ttacagtaagacctaaagattcattggatttcctcagtgtctgttgttat
gtcctccttttcattgcttattttattaatttggatattctctctttaca
ttttagttagattgactaagggtttgtctatcttttgtttttttctaaga
tccaactcttggtttcatggattctttatattttctttttgttctaattt
attgacttcagccttgagtttgattatttcctcttgtccaattctcttgg
gtgtatatcctcctttttgttttagagttttcaggtatgtttttaaatca
ctagcattagatttttccaatttctttatgaaggcacttagtgctatgaa
ctttcttcttagcactgctttcattgtgtcatataagtgtgggtatatca
tgcattcattttcactgaattctagtaaatctttaatttatttctttatt
tcttccttgacctgatatcatcaggtagagagttgttgagtttccatgcg
tttgtagtctctgttgcttctgttgttgttgacatccaacttcaattcat
ggtgatttgataagatataggggttatttcaatttccttgtatgtgttga
aacttgctttgtgactgattacatggtcaaattcagataaagttctctga
ggttctaggaagacggcatattcttttctgtctgagtgaaaagttccgta
gatatctgttaggtcaattaatgtcataacatttgtttagctttttattt
aatttcagtctaggtgacctgtctttggtgagagtagatgttgaagtctc
acatgtatgtgtggagtttgattggatttagccttactgttctatcacat
ttgcaagctgaggtgcgcttacttttggggtatagtggtcataatcagac

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctcgatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctggactttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctccctttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaaaggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccactgggttgatttcaccccctgagtttgatta
tttcctgccgtttctcctcttgggtgaattttgcttcctttttttctagg
gctttagatgtgtggcaagctgctagtatgtgctgtctcctgtttcttct
ggaggcactctgagctattagttttccttctaaaaatgctttcattgtgt
cc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61720249_61720801
seq2: B6Ng01-107P01.g_518_1068 (reverse)

seq1  GGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGCGCTGAGTGCCT  50
      ||||||||||||||||||| ||  ||| ||||| ||||| | ||||||||
seq2  GGACACAATGAAAGCATTTTTAGAAGGAAAACTAATAGCTCAGAGTGCCT  50

seq1  CCAAGAAGAAACGGGAGACAGCACATACTAGCAGCTTGACAACACATCTA  100
      || ||||||||| ||||||||||||||||||||||||| | |||||||| 
seq2  CC-AGAAGAAACAGGAGACAGCACATACTAGCAGCTTG-CCACACATCT-  97

seq1  AAAGCCCTAGAAAAAAAGGAAGC-AAATTCACCCAAGAGGAGTAGACGGC  149
      ||||||||||||||||||||||| |||||||||||||||||| | |||||
seq2  AAAGCCCTAGAAAAAAAGGAAGCAAAATTCACCCAAGAGGAG-AAACGGC  146

seq1  AGGAAATAATCAAACTCA-GGGGTGAAATCAACCAAGTGGAAACAAGAAG  198
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  AGGAAATAATCAAACTCAGGGGGTGAAATCAACCCAGTGGAAACAAGAAG  196

seq1  AACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCA  246

seq1  ACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAA  298
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAAGATAGATAAACCTTTAGCTAGACTCACTAAAGGGCACAGGGACAAA  296

seq1  ATCCTAATTAACAAAATCAGAAATG-AAAAGGGAGACATAACAACAGATC  347
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATCCTAATTAACAAAATCAGAAATGAAAAAGGGAGACATAACAACAGATC  346

seq1  CTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCA  396

seq1  ACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCA  446

seq1  GGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATAT  497
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  GGTACC-AAGTTGAATCAGGATCAAGTTGATCATCTAAACAGTCCCATAT  495

seq1  CACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGT  545

seq1  CCAGGA  553
      ||||||
seq2  CCAGGA  551