BAC Information

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BAC

Clone NameB6Ng01-107P06
Chromosome1 (Build37)
Map Location 8,524,576 - 8,525,224
singlet/doubletsinglet
Overlap geneSntg1
Upstream geneLOC665063, LOC665069, LOC100039408
Downstream geneLOC100039474, LOC620444, EG665007, LOC665103, LOC100039464, EG620853, LOC665138
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107P06.bB6Ng01-107P06.g
ACCDH915268DH915269
length1,1721,006
definitionDH915268|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P06, 5' end.DH915269|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcttcagagacttgaagttcttaccatacagatttttcattc
cttatttgtgactattgtgagggtgttttttccataatttcttactcagc
ctgtttatcctttgggtagagaaaatccattgatttgtttgagttaattt
tatatccaactacttcactgaagctgtttatcaggtttaaagttctctgg
tggaatttttaggatcacttatatatactattatatcctctgcaaatagt
gatactttgacttcttcctttccaatttgtatccccttgacctccttttg
ttttctagcatctaacaagatgatcatgtgagttttgtctttgagtttgt
ttacatagtagattatgttgatggattttcatatattaaaccattcctgc
ttccctgaatgaagcctgcttgttcattatggatgattgttttgatgtgt
tcttagattcagttaataagaattttattatttttgcatcaacattcata
agggaaattggtctgaagttctctatctttgttgggtcaatatgtggctt
aggtatcagagtaattgtggcttcatagaatgaatagggtagagttcctt
ctgtttttattttgtggaaaagtttgaggagaactggaattaagtcttct
ttgaaggtctgatagaactctgcactaaacgcatctggtcctgggatttt
tttggctgggagactattagtgactgcttctatttctttagggaatatag
gactgtttagaattaatctgatcctgatttaactttggtaccttgtatct
atctagaaatttgtccaggttctccagttttgtttgagtatagccttttg
tagaaggatctgatggtgtttggatttcctcaggatctgttattatgtct
cccttttcatttctgattttgttattaggatactatccctgcgccctcta
gtgagtctggctaaaggtttatatatcttgtaaatttctcatagactagc
tcgtggttggttgatctttgaatattccttttggttccaccttgtgattt
tagccctgagctgatattcctctgtctgcctctaatagtgaattgatctt
tggttcccgagattaaggtgctgccactgctactggtgctcctcccacgt
tatctagagaggcactcaggag
gaattccagtattccacagcccagcattcacatcatcaaacaagaccatg
tctcaaataagttggaaatagaacattgatacaaaggttgttcttggagt
gtgctgtggtacactcaacctttaaacacacatgcattttctctcatttc
ttctcttttttaaataataaaacataattagataaaaaagaaccaacaca
tctgaaattggaaaagactaatagacagagaaaaatgtccaagagaatac
acaagaatcaaagactcattcatccacacaattactcaggaataccatag
aaatgtaaaactagaagttgtaataaatattttgaggccctatgcatgct
gtcccattgattggaaaaagactaaagctcatttgcagggagtatagaga
gatactaatatttctcatgacttggaacagttaaaggtagaaatttcaga
tattagtaaaagtcatttggacacttggaacattgatgaattggctagag
atttgaaaaacaacttaagtgcattgaaccccctggattgggttcagtat
ataatcctacttgttattatttttggcattgttttattagtaatcattgt
gtttccactcatctttagagtgctcctgaggtctggagctacgatgaggc
aggacatcctggaacttcagctaaaaaataaaaaaagaaagggagaaatg
cccacgcactccggtcgagtcagcttgacagggctgtgaagcctaaaagc
cactcacaaggcagagagtttcaaggaagctcacctcccggagttttggc
attctcattcaaccatatactcatactctattcccgagttagtctggtgt
atggatctatgagctctcttttaatattttattataaatgccttttaaga
ttaaattctgttatattaagcctccacattgttcaaggtcccagagcctg
caagcttgaatctgagcttgaaactggcagaatgcaaaaggaagttacct
attcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_8524576_8525224
seq2: B6Ng01-107P06.g_68_716 (reverse)

seq1  CCTCATCGTAGCTCCAGACCTCAGGAGCACTCTAAAGATGAGTGGAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCGTAGCTCCAGACCTCAGGAGCACTCTAAAGATGAGTGGAAACA  50

seq1  CAATGATTACTAATAAAACAATGCCAAAAATAATAACAAGTAGGATTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATTACTAATAAAACAATGCCAAAAATAATAACAAGTAGGATTATA  100

seq1  TACTGAACCCAATCCAGGGGGTTCAATGCACTTAAGTTGTTTTTCAAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAACCCAATCCAGGGGGTTCAATGCACTTAAGTTGTTTTTCAAATC  150

seq1  TCTAGCCAATTCATCAATGTTCCAAGTGTCCAAATGACTTTTACTAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCAATTCATCAATGTTCCAAGTGTCCAAATGACTTTTACTAATAT  200

seq1  CTGAAATTTCTACCTTTAACTGTTCCAAGTCATGAGAAATATTAGTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTTCTACCTTTAACTGTTCCAAGTCATGAGAAATATTAGTATCT  250

seq1  CTCTATACTCCCTGCAAATGAGCTTTAGTCTTTTTCCAATCAATGGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATACTCCCTGCAAATGAGCTTTAGTCTTTTTCCAATCAATGGGACA  300

seq1  GCATGCATAGGGCCTCAAAATATTTATTACAACTTCTAGTTTTACATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCATAGGGCCTCAAAATATTTATTACAACTTCTAGTTTTACATTTC  350

seq1  TATGGTATTCCTGAGTAATTGTGTGGATGAATGAGTCTTTGATTCTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTATTCCTGAGTAATTGTGTGGATGAATGAGTCTTTGATTCTTGTG  400

seq1  TATTCTCTTGGACATTTTTCTCTGTCTATTAGTCTTTTCCAATTTCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTTGGACATTTTTCTCTGTCTATTAGTCTTTTCCAATTTCAGAT  450

seq1  GTGTTGGTTCTTTTTTATCTAATTATGTTTTATTATTTAAAAAAGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGTTCTTTTTTATCTAATTATGTTTTATTATTTAAAAAAGAGAAG  500

seq1  AAATGAGAGAAAATGCATGTGTGTTTAAAGGTTGAGTGTACCACAGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAGAAAATGCATGTGTGTTTAAAGGTTGAGTGTACCACAGCACA  550

seq1  CTCCAAGAACAACCTTTGTATCAATGTTCTATTTCCAACTTATTTGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGAACAACCTTTGTATCAATGTTCTATTTCCAACTTATTTGAGAC  600

seq1  ATGGTCTTGTTTGATGATGTGAATGCTGGGCTGTGGAATACTGGAATTC  649
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTGTTTGATGATGTGAATGCTGGGCTGTGGAATACTGGAATTC  649