BAC Information

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BAC

Clone NameB6Ng01-108N02
Chromosome1 (Build37)
Map Location 37,120,313 - 37,332,331
singlet/doubletdoublet
Overlap geneA230074B11Rik, 4921511C04Rik, Cnga3
Upstream geneHs6st1, Ugcgl1, LOC100041123, Lincr, Arid5a, 4632411B12Rik, 4930533C12Rik, Lman2l, Cnnm4, Cnnm3, Ankrd23, Ankrd39, Sema4c, 1700024G10Rik, BC050210, EG623414, Cox5b, Actr1b, 4933424G06Rik, Zap70, Tmem131, EG241053
Downstream geneInpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123, Aff3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108N02.bB6Ng01-108N02.g
ACCDH915901DH915902
length433489
definitionDH915901|Mus musculus domesticus DNA, BAC clone: B6Ng01-108N02, 5' end.DH915902|Mus musculus domesticus DNA, BAC clone: B6Ng01-108N02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,120,313 - 37,120,751)(37,331,837 - 37,332,331)
sequence
tctgcattttccacggagggcgttgacggctccatgacttggaattcacg
gaaactgaaagggagactccctccaggtacctggaaccccgaaggagcag
tatcacttgtaaccttagtcatttcaagtgctctgcaatacagtttggaa
ataaaggacgaaatagggaccacccatatcttctgcattatttccttggc
acaaccatgcacccagtgggatttcacagtgaatggatctgtctagaaac
tgctttaaatgtgtggctcacagaaacagtctaagggatgtgtgctcact
gacatgggaaccttctggagatgtggccctagccatgctattcctggggt
tagttaggtccaagctaggcagagccaccctgctttctgggctagtaggg
aggctgcatagggaggggaggcggggagggggg
aataactgcctctgccctcccaacccccaatattgttgctaaaaacctaa
cttaaagagtggtgacggctttcgtctgtagttccagaatgcaagaggct
ggcacggggagattatcaagagtctgacatcagtttcagcaatgttggga
gtttgtggccaaatagcaggggactctctgtgcagttcagctgcatggga
agtaggctgggttgtcaaggtgaccacaggtactaatgagctttgtgctt
gttttaagtgtctgggaggggctcccaggtgttcagcgtcctcagtgtga
tgttctgtctacacaacaatctcaaaggcattggcagtgaacccttagca
tcagccacttcacgtcctgtttcttccgggcatgatcatgtttttaatgt
tggggaacactgggtcggagcaaccttaggcataggcccattggccaccg
gagtcaatgacgggagtccaatgagcttggacttctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_37120313_37120751
seq2: B6Ng01-108N02.b_46_484

seq1  GAATTCTCTGCATTTTCCACGGAGGGCGTTGACGGCTCCATGACTTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCATTTTCCACGGAGGGCGTTGACGGCTCCATGACTTGGAA  50

seq1  TTCACGGAAACTGAAAGGGAGACTCCCTCCAGGTACCTGGAACCCCGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGGAAACTGAAAGGGAGACTCCCTCCAGGTACCTGGAACCCCGAAG  100

seq1  GAGCAGTATCACTTGTAACCTTAGTCATTTCAAGTGCTCTGCAATACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTATCACTTGTAACCTTAGTCATTTCAAGTGCTCTGCAATACAGT  150

seq1  TTGGAAATAAAGGACGAAATAGGGACCACCCATATCTTCTGCATTATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATAAAGGACGAAATAGGGACCACCCATATCTTCTGCATTATTTC  200

seq1  CTTGGCACAACCATGCACCCAGTGGGATTTCACAGTGAATGGATCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCACAACCATGCACCCAGTGGGATTTCACAGTGAATGGATCTGTCT  250

seq1  AGAAACTGCTTTAAATGTGTGGCTCACAGAAACAGTCTAAGGGATGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGCTTTAAATGTGTGGCTCACAGAAACAGTCTAAGGGATGTGTG  300

seq1  CTCACTGACATGGGAACCTTCTGGAGATGTGGCCCTAGCCATGCTATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGACATGGGAACCTTCTGGAGATGTGGCCCTAGCCATGCTATTCC  350

seq1  TGGGGTTAGTTAGGTCCAAGCTAGGCAGAGCCACCCTGCTTTCTGGGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTAGTTAGGTCCAAGCTAGGCAGAGCCACCCTGCTTTCTGGGCTA  400

seq1  GTAGGGAGGCTGCATAGGGAGGGGAGGCGGGGAGGGGGG  439
      |||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGAGGCTGCATAGGGAGGGGAGGCGGGGAGGGGGG  439

seq1: chr1_37331837_37332331
seq2: B6Ng01-108N02.g_68_562 (reverse)

seq1  CTGAGAAGTCCAAGCTCATTGGACTCCCGTCATTGACTCCGGTGGCCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGTCCAAGCTCATTGGACTCCCGTCATTGACTCCGGTGGCCAAT  50

seq1  GGGCCTATGCCTAAGGTTGCTCCGACCCAGTGTTCCCCAACATTAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTATGCCTAAGGTTGCTCCGACCCAGTGTTCCCCAACATTAAAAAC  100

seq1  ATGATCATGCCCGGAAGAAACAGGACGTGAAGTGGCTGATGCTAAGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCATGCCCGGAAGAAACAGGACGTGAAGTGGCTGATGCTAAGGGTT  150

seq1  CACTGCCAATGCCTTTGAGATTGTTGTGTAGACAGAACATCACACTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCAATGCCTTTGAGATTGTTGTGTAGACAGAACATCACACTGAGG  200

seq1  ACGCTGAACACCTGGGAGCCCCTCCCAGACACTTAAAACAAGCACAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGAACACCTGGGAGCCCCTCCCAGACACTTAAAACAAGCACAAAGC  250

seq1  TCATTAGTACCTGTGGTCACCTTGACAACCCAGCCTACTTCCCATGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGTACCTGTGGTCACCTTGACAACCCAGCCTACTTCCCATGCAGC  300

seq1  TGAACTGCACAGAGAGTCCCCTGCTATTTGGCCACAAACTCCCAACATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGCACAGAGAGTCCCCTGCTATTTGGCCACAAACTCCCAACATTG  350

seq1  CTGAAACTGATGTCAGACTCTTGATAATCTCCCCGTGCCAGCCTCTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTGATGTCAGACTCTTGATAATCTCCCCGTGCCAGCCTCTTGCA  400

seq1  TTCTGGAACTACAGACGAAAGCCGTCACCACTCTTTAAGTTAGGTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAACTACAGACGAAAGCCGTCACCACTCTTTAAGTTAGGTTTTTA  450

seq1  GCAACAATATTGGGGGTTGGGAGGGCAGAGGCAGTTATTGAATTC  495
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAATATTGGGGGTTGGGAGGGCAGAGGCAGTTATTGAATTC  495