BAC Information

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BAC

Clone NameB6Ng01-109A03
Chromosome1 (Build37)
Map Location 151,553,003 - 151,553,679
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109A03.bB6Ng01-109A03.g
ACCDH916041DH916042
length6811,171
definitionDH916041|Mus musculus domesticus DNA, BAC clone: B6Ng01-109A03, 5' end.DH916042|Mus musculus domesticus DNA, BAC clone: B6Ng01-109A03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagtcttaaaaagatttccacagcctttcccacaatggtctgt
gagccttgggtgcaagaactatgatgtagctgggtaccccacaatccttg
gatctctccattgtctccaattgtggtttaccatttgctgtgaagaaaag
cttctctgatgaggaataatagttccacttatctgtgggaataagcccac
gatttagaatgtacttgagaaccatgctggtctggaaatgttgttgtaat
agacccttcgaagaagtatgaactcattgttcttgggagattgggaatgt
ggctaccaccagggatgatttccattttgttgaataggttttaagtccaa
tttagacagctgttggttaccaacgtatgagtgccacttatgtaccttcc
tggatattttgtcatgctggtcactgttgtggttaataggagtcactgct
gggaatgaagaggggatgggtgggaagattttcagagccagcatgccata
atatctgctgggggaaaaagtctctcagagaaacagcagcataaactaga
tctaaaataaagtagcaatatcgataaacattgctagcacagaagaggaa
aaatttcacagggtcccaaccctggacaaagaactataggcaacaaaaag
cctgcagatagaggggtaattagcctttcca
gaattcatgatgaacttagaagtaagggcaaaactttgtgagtaatgact
ggaagtaagggcattatgaggaggaacgagcaacattaggagaaaaagag
atgagagagaactttatgagaacaagagagaactttcttagagaactttt
tggagaaccttttagagagaacattttggaggagaacatttatagaaaca
ttttggagaactaagaacatacaaataaaagctaaaaccacttttcatct
tttccctttgtcttagggttttactgctgtgaacaaataccatgaccaag
gcaatttttataaaggacaacatttaattgggagtgtcttacaggttcag
aggtttagtccactattgccacgcactctggtcgagtcagtttgacaagc
tgagaggcttgaaagctactcacaaggcaaaagagtttcacggaaactca
cttctggagtctggtgttctctctaacccatacatgaattttccattccc
gagttagtctagtgtatggatcccgtgctctcttttagtattatcctatt
acaagtgccttttaagattgaactctgacatagctaaagtcttccgccag
tgttccaacagtcctagaatgtccttgagcaagaccatgggcttgcaatt
caggaagaatgttgttttcactgatattcaaaataacctctgatattaca
ctatcacttagaataaaagccaagtcgctcccatatataggaatttacaa
tggtttaggacgtagatcgggctgtggttttagagtatttcattattcat
gagatggttagctagaacagaactacctagttagaaccataacttgggtg
tgaaagccttgcctagagagtaaagacctcacacctggcttctaagacta
tagctgagttacccatacacacgtatttacaatcgcttaagggaagtgac
tttacagtagactaaattagactatggcaaggcacgagccttgaccttgc
ttctaagattagcgaatcttaggtggagccttgttgatccagttgttaca
agatcatacaggggttccgttaactctgggttgaatcccgtttaagagaa
tcagaaccttgaccttccgagtaccacttcttatgcttctgtatagctga
ggccgaattgaacatacttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151553003_151553679
seq2: B6Ng01-109A03.b_51_731

seq1  GAATTCTGAGTCTTAAAAAGATTTCCACAGCCTTTCCCACAATGGTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTCTTAAAAAGATTTCCACAGCCTTTCCCACAATGGTCTGT  50

seq1  GAGCCTTGGGTGCAAGAACTATGATGTAGCTGGGTACCCCACAATCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTGGGTGCAAGAACTATGATGTAGCTGGGTACCCCACAATCCTTG  100

seq1  GATCTCTCCATTGTCTCCAATTGTGGTTTACCATTTGCTGTGAAGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTCCATTGTCTCCAATTGTGGTTTACCATTTGCTGTGAAGAAAAG  150

seq1  CTTCTCTGATGAGGAATAATAGTTCCACTTATCTGTGGGAATAAGCCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGATGAGGAATAATAGTTCCACTTATCTGTGGGAATAAGCCCAC  200

seq1  GATTTAGAATGTACTTGAGAACCATGCTGGTCTGGAAATGTTGTTGTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAATGTACTTGAGAACCATGCTGGTCTGGAAATGTTGTTGTAAT  250

seq1  AGACCCTTCGAAGAAGTATGAACTCATTGTTCTTGGGAGATTGGGAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTCGAAGAAGTATGAACTCATTGTTCTTGGGAGATTGGGAATGT  300

seq1  GGCTACCACCAGGGATGATTTCCATTTTGTTGAATAGGTTTTAAGTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACCACCAGGGATGATTTCCATTTTGTTGAATAGGTTTTAAGTCCAA  350

seq1  TTTAGACAGCTGTTGGTTACCAACGTATGAGTGCCACTTATGTACCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACAGCTGTTGGTTACCAACGTATGAGTGCCACTTATGTACCTTCC  400

seq1  TGGATATTTTGTCATGCTGGTCACTGTTGTGGTTAATAGGAGTCACTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTTGTCATGCTGGTCACTGTTGTGGTTAATAGGAGTCACTGCT  450

seq1  GGGAATGAAGAGGGGATGGGTGGGAAGATTTTCAGAGCCAGCATGCCAGA  500
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGGAATGAAGAGGGGATGGGTGGGAAGATTTTCAGAGCCAGCATGCCATA  500

seq1  ATATCTGCT-GGGGAAAAAGTCTCTCAGAGAAACAGCAGCATAAACAAGA  549
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  ATATCTGCTGGGGGAAAAAGTCTCTCAGAGAAACAGCAGCATAAACTAGA  550

seq1  TCTAAAAT-AAGTAGCAATATCGATAAACA-TGCTAGCACAGAAGAGGAA  597
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TCTAAAATAAAGTAGCAATATCGATAAACATTGCTAGCACAGAAGAGGAA  600

seq1  AAATTTCACAGGGTCCCAACCCTGGACAAAGAACTATAGGCAAC-AAAAG  646
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAATTTCACAGGGTCCCAACCCTGGACAAAGAACTATAGGCAACAAAAAG  650

seq1  CCTGCAGAAAGAGGGGTAATTAGCCTTTCCA  677
      |||||||| ||||||||||||||||||||||
seq2  CCTGCAGATAGAGGGGTAATTAGCCTTTCCA  681