BAC Information

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BAC

Clone NameB6Ng01-109C17
Chromosome1 (Build37)
Map Location 115,340,580 - 115,341,176
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666635
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109C17.bB6Ng01-109C17.g
ACCDH916149DH916150
length1,118581
definitionDH916149|Mus musculus domesticus DNA, BAC clone: B6Ng01-109C17, 5' end.DH916150|Mus musculus domesticus DNA, BAC clone: B6Ng01-109C17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctcataaaaatgcttgtgtcataaatgccatagttttgtttt
attgtttgtttgttttttcaattgattcaaacctagagatacctggcaag
agtgagaatttattctaacagaatggctgctggcaggtatatggaggtat
tttcttcattgctatttaacatagaagggccagccttctctgtgtagtac
catctatggacaggtgagccttggctatcaaaaattattagcaagacacg
gggagcaagccactgagcagtactcctctgtgatatctactttaattctt
tcccccgggttcctggtttgaattccagcccccacttacctgtttatgga
ctctaatttgttagtcaaataaatcctgtcttagttagagttgctattgc
taattatgcgatgtaataggataatcaatcctaatttggggaggaaagtg
ttcattttgcttacatgcccacttgactgttcattactgaagggaattgg
gattggaattcaatcagaggaggaaccaagagacaagaactgatgaagag
accatggaagaatgctatttgatggcttgctcagtctactttcttttctt
ttctcttttcttttttttaaaatgttttaatgactactttctttatttac
atttcaaatgttatacccctttcctgataacacctcaaaatcccctatcc
catcctctctgacctacttctatgagggtgttctctcatccaccaaccca
ctcctgcctccccgcccttgaatttccatacactggggaacaaaatacac
ataggagcaaataccgagacaaagtgtggagcagagactgaaagaaaggc
catccaatggacctggagggcatcatcctgagtgaggtaacccaatcaca
aaagaactcacacgatatgtactcactgatagtggatataagcccagaaa
cttagatacccagatatagatacatttgctaaatgcatgaactcagaaga
tgaagaccaaatgtggacactttgcccttcttaaatgggaaaaaacaccc
atggaggaatcgatactaagcttggagctgatatgaatggatggaccatt
gagctgccagtcagggat
gaattcaagtttacaggtaaaaacacaacagagaattgggaatatccata
tgaaaacacttagtttggttgccaaccaaggaacattaactttgtcccct
ttcttccttcctttctttctttctttctttctttctttctttctttcttt
ctttctttctttctttctttctctctctctctctctctctctctctcttt
ctttctttctttcttttaaattaggtatttatttcatttacatttccaat
gctatcctaaaagtcccccagaggctcccccaccaattcctccatctagc
cactcgcactccttggccctggcgttcccctgtactggggcatataaagt
ttgcacaaccaatgggcctctctttccagtgatggccaaataggtgatct
tttgatacatatgcagctagagtcaagagctccggctactggttagttat
attgtggtccacctacaggttgcagatccccagctccttggtaattctct
agctctcattgcgcctgtgatccatccaatacttactgtgagcatccact
tatgtgttgctagcctcggcatagtgtcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115340580_115341176
seq2: B6Ng01-109C17.g_66_646

seq1  GAATTCAAGTTTACAGGTAAAAACACAACAGAGAATTGGGAATATCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTTACAGGTAAAAACACAACAGAGAATTGGGAATATCCATA  50

seq1  TGAAAACACTTAGTTTGGTTGCCAACCAAGGAACATTAACTTTGTCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACACTTAGTTTGGTTGCCAACCAAGGAACATTAACTTTGTCCCCT  100

seq1  TTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  150

seq1  CTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTT  200

seq1  CTTTCTTTCTTTCTTTTAAATTAGGTATTTATTTCATTTACATTTCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTTAAATTAGGTATTTATTTCATTTACATTTCCAAT  250

seq1  GCTATCCTAAAAGTCCCCCAGAGGCTCCCCCACCAATTCCTCCATCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTAAAAGTCCCCCAGAGGCTCCCCCACCAATTCCTCCATCTAGC  300

seq1  CACTCGCACTCCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGCACTCCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGT  350

seq1  TTGCACAACCAATGGGCCTCTCTTTCCAGTGATGGCCAAATAGGTGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAACCAATGGGCCTCTCTTTCCAGTGATGGCCAAATAGGTGATCT  400

seq1  TTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGCTACTGGTTAGTTT  450
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TTTGATACATATGCAGCTAGAGTCAAGAGCTCC-GGCTACTGGTTAG-TT  448

seq1  ATATTGTTGGTCCACCTACAGGGTTGCAGATCCCCCCAGCTCCTTGGGTA  500
      |||||| ||||||||||||| ||||||||||  |||||||||||| ||||
seq2  ATATTG-TGGTCCACCTACA-GGTTGCAGAT--CCCCAGCTCCTT-GGTA  493

seq1  ATTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAACTTAC  550
      | |||||||||||   ||||| |   ||||||||||||||||| ||||||
seq2  A-TTCTCTAGCTC--TCATTGCG---CCTGTGATCCATCCAAT-ACTTAC  536

seq1  TGTGAGCATCCACTTATGTGTTTGCTAGGCCTCGGCATAGTGTCACA  597
      |||||||||||||||||||| |||||| |||||||||||||||||||
seq2  TGTGAGCATCCACTTATGTG-TTGCTA-GCCTCGGCATAGTGTCACA  581