BAC Information

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BAC

Clone NameB6Ng01-109F21
Chromosome1 (Build37)
Map Location 149,921,039 - 149,921,547
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109F21.bB6Ng01-109F21.g
ACCDH916294DH916295
length2941,151
definitionDH916294|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F21, 5' end.DH916295|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttgtagtagagttgtcattcctcatgtggtatgtggtgtcaaaaaaaagt
ttattcttatagttaataaacctggaatataaagttgtacctttcactaa
aattccctaagctactgtgtgtatttttgaagatacttagataatagttt
catgtaatcaaatgccaaaagcagtgtgccaacaactgaccagataggta
aaaaccccaagtgatcaccacttgcactctacacagtttctttctttctt
cctttcttcctttctccttccttccttccttccttccttacata
gaattctcgcctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaatccaggtgacagc
aaatgcttgcgaggatgtggagaaagaggaacactcctccattgttggtg
gggttgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctctgtgagactatgccggggcctagcaaaca
cagaagtgatgctcacagtcagctaatagatggatcacaggctccatgag
agctagagaaagtacccagagctaaagggatctgcaccctatagtggatc
acattatgactaccagtactcgagctctgactctagctgcattgtatcaa
gatgctagtcgcactactggaacggagtattggaaggtcacttttgcagt
catggagccagtctaaggaatgcgggtgagtgcagatgaccaatatcgcg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149921039_149921547
seq2: B6Ng01-109F21.b_51_344 (reverse)

seq1  TATGTACTTCCCACATTCAGTATTTATGATTAACTTATTCACTGGTAAAC  50
                                                        
seq2  --------------------------------------------------  0

seq1  CTCACTTGGATGGTCCTTGGTTATGACCCAAAAATAAGCAAAGGAAGAAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAGAAAGAATGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  150
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAAAGAGAGAGAAAGAGAGAGAGAGGGGAAGGAAGGAAGGAAGGGAGG  200
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGAAAG  250
                      | | ||||||||||||||||||||||||||||||
seq2  ---------------TATGTAAGGAAGGAAGGAAGGAAGGAAGGAGAAAG  35

seq1  GAAGAAAGGAAGAAAGAAAGAAACTGTGTAGAGTGCAAGTGGTGATCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGAAGAAAGAAAGAAACTGTGTAGAGTGCAAGTGGTGATCACT  85

seq1  TGGGGTTTTTACCTATCTGGTCAGTTGTTGGCACACTGCTTTTGGCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTTTACCTATCTGGTCAGTTGTTGGCACACTGCTTTTGGCATTT  135

seq1  GATTACATGAAACTATTATCTAAGTATCTTCAAAAATACACACAGTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACATGAAACTATTATCTAAGTATCTTCAAAAATACACACAGTAGCT  185

seq1  TAGGGAATTTTAGTGAAAGGTACAACTTTATATTCCAGGTTTATTAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATTTTAGTGAAAGGTACAACTTTATATTCCAGGTTTATTAACTA  235

seq1  TAAGAATAAACTTTTTTTTGACACCACATACCACATGAGGAATGACAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATAAACTTTTTTTTGACACCACATACCACATGAGGAATGACAACT  285

seq1  CTACTACAA  509
      |||||||||
seq2  CTACTACAA  294