BAC Information

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BAC

Clone NameB6Ng01-109G08
Chromosome1 (Build37)
Map Location 114,603,158 - 114,604,061
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
Downstream geneLOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109G08.bB6Ng01-109G08.g
ACCDH916316DH916317
length9471,199
definitionDH916316|Mus musculus domesticus DNA, BAC clone: B6Ng01-109G08, 5' end.DH916317|Mus musculus domesticus DNA, BAC clone: B6Ng01-109G08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagcaaaagaatcttgaatggctgaaaagcacttaaagaaata
ttcaatatccttattcagcaaggaaatgcaaatcaaaacaaaactgagat
tccaccttacacagatcagaatgactaagatgaaaaaaaaaagaaagaaa
gaaagaaaaagaaagagaaaaagaaaaaagaacaacaactaccaacaccc
cgccccccccccccccccaaaaaaaaagcctaaggtgacagtagatgctg
gagggattgtagaaaaaatgcaatactcctccatttctagtgggtttgat
aactggttcaaaccctctggaaatttggcagttcctcagaaaactggaaa
tagctctacatggttgttggcccaggttcactcttccactgagcatggct
gcttggggagactgaaggagggggatgctggagctggctcagggggtagc
tgggcttgtgatgaagtcaaggctgtggggttcttgccaggtgctgcagg
gagtctcagaagtgcagaaaacagagtcaggggttctcaggcaggtaaca
ggttctagccttgggtcagagggtcggtaagaggggaggggagttcctgc
tttctcagtggggatgattgttcttagctttgcagcagcaggtgtgttgg
tggttgtggcctggagcacagagtataggagattaggctgcagctctgta
gacacaggtgttcttcctggctccccatgatggatattaaggaaaagagg
cagcccatgtttctaaacagtttattgccatgactgaaagtggttttgta
aaaccataccccacttctcacggtgggcctaaaattgaacactttttgca
tggagggaacttattgactagccctctgggcctctggtacctcattagca
tggagacactgtttgggcctatgtgactgtggccatgcctttcctat
gaattctttggtttctccatctatggtaattgagagtttggctgggtata
tagcctgggttggcatttgtgttctcttagtgtctgtataacttctgtcc
agtctcttcaggctttcatagtcactggtgaaaaatctgctgtaattctg
ataggcttccttttatatgttacttgacctttctcccttactgcttttaa
tattctatctttatttagtgcatttgttgttctgattattatgtgtcagg
aggaatttcttttctggtccagtctatttggagttctgtaggcttcttgt
atgttcatgggcatctcattctttaggtttgggaagttttcttcaataat
tttgttgttaaaggtatttgccagtcctttgagctcaaaatcttcattct
catctactcctattatctgtaggtttgatcttctcattgtgtcctggatt
tcctcgatgttttgagttaggatctttttgcattttccattttctttgat
tgttgtgccaatgttctctatggaatcttctgtacccgagattctctctt
ccatctcttgtattctgttgctgatgctcacatctatggttccagatttc
tttcctagggtttctatctccaccattgccttactttgggttttctttat
tgtgttcacttccctttttaggtcttggatggttttatctaattccatca
cctgtttggttgtgttttcctgcaattcattaggggatatttgtgcttcc
tcttaggatcttctacctgtttagcagtgttctcctgtatttctttaagt
gagttattaaagtccttcttgatgtcctctagcatcatcatgagatttgc
ttttaaatcccggcccagcttttcgtgtgtgttgtgtgccctgtactgtg
cgaagtgggagtgctgggttctgatgatgtgactggtcttggtttctgtt
agtagattcttacgtttaccctttgcatctggaaatccctggagtagttg
ttatattgtgctcttgtttaaagatagtgtcctctgtgattctgttaccc
tctatcaccaagacttgggagaactagttttctcctctgagattcatgtg
caagaacacctatgatgcagctctggtctacaggaggtagcatgaatttt
gtcgacttcttctgcaaaatagccaaaaggaccttccagagcaggtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114603158_114604061
seq2: B6Ng01-109G08.b_46_946

seq1  GAATTCTTAGCAAAAGAATCTTGAATGGCTGAAAAGCACTTAAAGAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCAAAAGAATCTTGAATGGCTGAAAAGCACTTAAAGAAATA  50

seq1  TTCAATATCCTTATTCAGCAAGGAAATGCAAATCAAAACAAAACTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATCCTTATTCAGCAAGGAAATGCAAATCAAAACAAAACTGAGAT  100

seq1  TCCACCTTACACAGATCAGAATGACTAAGATGAAAAAAAAAAGAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTTACACAGATCAGAATGACTAAGATGAAAAAAAAAAGAAAGAAA  150

seq1  GAAAGAAAAAGAAAGAGAAAAAGAAAAAAGAACAACAACTACCAACACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAAGAAAGAGAAAAAGAAAAAAGAACAACAACTACCAACACCC  200

seq1  CGCCCCCCCCCCCCCCCCAAAAAAAAAGCCTAAGGTGACAGTAGATGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCCCCCCCCCCCCCAAAAAAAAAGCCTAAGGTGACAGTAGATGCTG  250

seq1  GAGGGATTGTAGAAAAAATGCAATACTCCTCCATTTCTAGTGGGTTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATTGTAGAAAAAATGCAATACTCCTCCATTTCTAGTGGGTTTGAT  300

seq1  AACTGGTTCAAACCCTCTGGAAATTTGGCAGTTCCTCAGAAAACTGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTTCAAACCCTCTGGAAATTTGGCAGTTCCTCAGAAAACTGGAAA  350

seq1  TAGCTCTACATGGTTGTTGGCCCAGGTTCACTCTTCCACTGAGCATGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTACATGGTTGTTGGCCCAGGTTCACTCTTCCACTGAGCATGGCT  400

seq1  GCTTGGGGAGACTGAAGGAGGGGGATGCTGGAGCTGGCTCAGGGGGTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGGAGACTGAAGGAGGGGGATGCTGGAGCTGGCTCAGGGGGTAGC  450

seq1  TGGGCTTGTGATGAAGTCAAGGCTGTGGGGTTCTTGCCAGGTGCTGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTGTGATGAAGTCAAGGCTGTGGGGTTCTTGCCAGGTGCTGCAGG  500

seq1  GAGTCTCAGAAGTGCAGAAAACAGAGTCAGGGGTTCTCAGGCAGGTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCAGAAGTGCAGAAAACAGAGTCAGGGGTTCTCAGGCAGGTAACA  550

seq1  GGTTCTAGCCTTGGGTCAGAGGGTCGGTAAGAGGGGAGGGGAGTTCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTAGCCTTGGGTCAGAGGGTCGGTAAGAGGGGAGGGGAGTTCCTGC  600

seq1  TTTCTCAGTGGGGATGATTGTTCTTAGCTTTGCAGCAGCAGGTGTGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTGGGGATGATTGTTCTTAGCTTTGCAGCAGCAGGTGTGTTGG  650

seq1  TGGTTGTGGCCTGGAGCACAGAGTATAGGAGATTAGGCTGCAGCTCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGGCCTGGAGCACAGAGTATAGGAGATTAGGCTGCAGCTCTGTA  700

seq1  GACACAGGTGTTCTTCCTGGCTCCCCATGATGGATATTAAGGAAAAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGTGTTCTTCCTGGCTCCCCATGATGGATATTAAGGAAAAGAGG  750

seq1  CAGCCCATGTTTCTAAACAGTTTATTGCCATGACTGAAAGTGGTTTTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATGTTTCTAAACAGTTTATTGCCATGACTGAAAGTGGTTTTGTA  800

seq1  AAACCATACCCCACTTCTCAGGGTGGGCCTAAAATTGAACACTTTTTGCA  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAACCATACCCCACTTCTCACGGTGGGCCTAAAATTGAACACTTTTTGCA  850

seq1  TGGAGGGAAACTTATTGACTAAGCCCTCTGGGCCTCTGGGTACCTCATTA  900
      ||||||| |||||||||||| |||||||||||||||| ||||||||||||
seq2  TGGAGGG-AACTTATTGACT-AGCCCTCTGGGCCTCT-GGTACCTCATTA  897

seq1  GCAT  904
      ||||
seq2  GCAT  901