BAC Information

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BAC

Clone NameB6Ng01-111I03
Chromosome1 (Build37)
Map Location 15,316,558 - 15,316,827
singlet/doubletsinglet
Overlap geneKcnb2
Upstream geneLOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959
Downstream genePpia-ps1_109.1, Terf1, Gm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111I03.bB6Ng01-111I03.g
ACCDH917834DH917835
length919270
definitionDH917834|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I03, 5' end.DH917835|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggcactgggacagactttctgaagacaacaccaatagcaca
ggcactaagactaacaatttaaaaatgggacctcatgaaactgaaaatct
acagcacagaaaaggacacttaggacaaagtggaagccgaaagagtggga
aaagtttttttcccaactacacatctggatagagcactaatatccaaaat
atataaataactcaaaaactagatacaaaaaaaacccctcctatgcagta
aaataaataaataaaaaataaaaaaaataaaaatggggtatagatctaaa
tagagaaaacttgaagggctcaggaacatgtaaatgttcagtattcttag
ccaatagtgaaatgtaaatcaaactacctcgattgttgatgggagtagaa
acccgcaccaccattatggaaatcagtgtgtcagttcttcaggaagacct
gaatcaatctacctcaagatccatctaaactactcttgggcatatatcca
aagggtgatttatgacaccacagaaacacttgcttagccatgttcattac
tgctctattcataaatacccagagactggaaacaacctagatgtcaccca
actgaagagtaaagaaaacatggtgattcacacaatggaattaactcagc
tgttaaaaaatgaaataatgaaattcttatctgaatgggtggatctaaaa
aaataatcatcccgagagaatcaactcagactcagaaagacacatatgct
atgcattttcttatatgttaatattaactgttaagtcaatgataaccaaa
ttacaatctggaagacctcagaggttaagtatcgagtaagggattgggag
tgcatatagatctctgtaggaaaggaaaatagaagagataattatggatg
ggtgaggatggtgttggct
caagaaatcaggaaactcccatcaagacagtgcccatatctgtaactgac
tgtggtatccagggagtcttggagcccacgtgactgtaggcattttctta
cctcagtgctctatgaaagttttatattttactgttgttcaaatatgtat
tagaaaatgtctttcctccatttaagtcattcatccttaaatgacttaag
gaaagaggacagagataaagagagacagagagagaggtagagatagagag
aggtaggggtaggggtaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_15316558_15316827
seq2: B6Ng01-111I03.g_73_342

seq1  CAAGAAATCAGGAAACTCCCATCAAGACAGTGCCCATATCTGTAACTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATCAGGAAACTCCCATCAAGACAGTGCCCATATCTGTAACTGAC  50

seq1  TGTGGTATCCAGGGAGTCTTGGAGCCCACGTGACTGTAGGCATTTTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATCCAGGGAGTCTTGGAGCCCACGTGACTGTAGGCATTTTCTTA  100

seq1  CCTCAGTGCTCTATGAAAGTTTTATATTTTACTGTTGTTCAAATATGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTGCTCTATGAAAGTTTTATATTTTACTGTTGTTCAAATATGTAT  150

seq1  TAGAAAATGTCTTTCCTCCATTTAAGTCATTCATCCTTAAATGACTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATGTCTTTCCTCCATTTAAGTCATTCATCCTTAAATGACTTAAG  200

seq1  GAAAGAGGACAGAGATAAAGAGAGACAGAGAGAGAGGTAGAGATAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGACAGAGATAAAGAGAGACAGAGAGAGAGGTAGAGATAGAGAG  250

seq1  AGGTAGGGGTAGGGGTAAAG  270
      ||||||||||||||||||||
seq2  AGGTAGGGGTAGGGGTAAAG  270