BAC Information

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BAC

Clone NameB6Ng01-112A12
Chromosome1 (Build37)
Map Location 72,982,536 - 72,983,475
singlet/doubletsinglet
Overlap geneLOC672187
Upstream geneEG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5
Downstream geneLOC100042860, Tnp1, 1700027A15Rik, Pinc, LOC672208, LOC100043291, Tns1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112A12.g
ACCDH918211
length937
definitionDH918211|Mus musculus domesticus DNA, BAC clone: B6Ng01-112A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagattcacaaacctggcagggaccttggtgagccatcttgctgg
ctctcgagaaattcttaaactggggtatactactgagacttcccgtatct
gcaggcaagtggactcgaagctgtacgaatgtataaagctcctagattga
tacgggtccttggacatgaagaactatctcatttctaaccaagtctaaga
gtagcaactttcctgctaagagaatttgcaacgttctcctaagggtcagc
ggaagacactggggggtctgagacctcaaagctccttcagagaaagctgt
ctggcttcataaacagagccctgctgtttgcatggtatgttattatagga
aggaaggttgatttgtttatttatttatttttagagcaggtttcaaaaca
aacgttgacagctggagatgtcaaagccatccacagccgggaggacccgg
atggtgctgagccacatctgcccagcctgcttccgaaagctgacagatct
attgatacaaagcagccaggtgcagatttgcatagcacagggtgaagtta
acgttttataatttgtttcttttactttggattttgagactgggtctcac
tgtgtagcttggctcacctgcaacttgctacataaaacttgtgacaattc
tcttacatctgcctccttagcaaaatagatgcacaatctccttggactct
gcctttcgcattaaattttctcttctattcctccctactccccaccccat
cacaaagtttggagtgagacttacaggttaaagttgtgttacctgaccct
gaagaccttgcatgaccattatggaggttatgtctcccagatgcatacct
tcaagccaggaacctctttcatctctgtctccatcagtctgtcgggtctg
agtttgtcaggcttacccgggctttgtcacgggccaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72982536_72983475
seq2: B6Ng01-112A12.g_67_1003

seq1  GAATTCAGATTCTCAAACCTGGCAGGGACCTTGGTGAGCCATCTTGCTGG  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTCACAAACCTGGCAGGGACCTTGGTGAGCCATCTTGCTGG  50

seq1  CTCTCGAGAAATTCTTAAACTGGGGTATACTACTGAGACTTCCCGTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGAGAAATTCTTAAACTGGGGTATACTACTGAGACTTCCCGTATCT  100

seq1  GCAGGCAAGTGGACTCGAAGCTGTACGAATGTATAAAGCTCCTAGATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAAGTGGACTCGAAGCTGTACGAATGTATAAAGCTCCTAGATTGA  150

seq1  TACGGGTCCTTGGACATGAAGAACTATCTCATTTCTAACCAAGTCTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGTCCTTGGACATGAAGAACTATCTCATTTCTAACCAAGTCTAAGA  200

seq1  GTAGCAACTTTCCTGCTAAGAGAATTTGCAACGTTCTCCTAAGGGTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAACTTTCCTGCTAAGAGAATTTGCAACGTTCTCCTAAGGGTCAGC  250

seq1  GGAAGACACTGGGGGGTCTGAGACCTCAAAGCTCCTTCAGAGAAAGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACACTGGGGGGTCTGAGACCTCAAAGCTCCTTCAGAGAAAGCTGT  300

seq1  CTGGCTTCATAAACAGAGCCCTGCTGTTTGCATGGTATGTTATTATAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCATAAACAGAGCCCTGCTGTTTGCATGGTATGTTATTATAGGA  350

seq1  AGGAAGGTTGATTTGTTTATTTATTTATTTTTAGAGCAGGTTTCAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTTGATTTGTTTATTTATTTATTTTTAGAGCAGGTTTCAAAACA  400

seq1  AACGTTGACAGCTGGAGATGTCAAAGCCATCCACAGCCGGGAGGACCCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTGACAGCTGGAGATGTCAAAGCCATCCACAGCCGGGAGGACCCGG  450

seq1  ATGGTGCTGAGCCACATCTGCCCAGCCTGCTTCCGAAAGCTGACAGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTGAGCCACATCTGCCCAGCCTGCTTCCGAAAGCTGACAGATCT  500

seq1  ATTGATACAAAGCAGCCAGGTGCAGATTTGCATAGCACAGGGTGAAGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATACAAAGCAGCCAGGTGCAGATTTGCATAGCACAGGGTGAAGTTA  550

seq1  ACGTTTTATAATTTGTTTCTTTTACTTTGGATTTTGAGACTGGGTCTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTTATAATTTGTTTCTTTTACTTTGGATTTTGAGACTGGGTCTCAC  600

seq1  TGTGTAGCTTGGCTCACCTGGAACTTGCTACATAAAACTTGTGACAATTC  650
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTGTAGCTTGGCTCACCTGCAACTTGCTACATAAAACTTGTGACAATTC  650

seq1  TCTTACATCTGCCTCCTTAGCAAAATAGATGCAGAATCTCCTTGGACTCT  700
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTTACATCTGCCTCCTTAGCAAAATAGATGCACAATCTCCTTGGACTCT  700

seq1  GCCTTTCTCATTAAATTTTCTCTTCTATTCCTCCCTACTCCCCAACCCCA  750
      ||||||| ||||||||||||||||||||||||||||||||||| ||||||
seq2  GCCTTTCGCATTAAATTTTCTCTTCTATTCCTCCCTACTCCCC-ACCCCA  749

seq1  TCAAAAAGTTTGGAGTGAGACTTACAGGTTAAAGTTTTGTTACCAGACCC  800
      ||| |||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TCACAAAGTTTGGAGTGAGACTTACAGGTTAAAGTTGTGTTACCTGACCC  799

seq1  AGAAGACCTTGCTTGACAATTAGGGAGGCTTTGGCTCCCAGAGGCATAAC  850
       ||||||||||| |||| |||| ||||| | || |||||||| ||||| |
seq2  TGAAGACCTTGCATGACCATTATGGAGGTTATGTCTCCCAGATGCATACC  849

seq1  ACCAAGCCAGGAACCTCTTTCAGCTCTGTCTCTGCCAGTCTGTTCTGGTC  900
        |||||||||||||||||||| |||||||||   ||||||| || ||||
seq2  TTCAAGCCAGGAACCTCTTTCATCTCTGTCTCCATCAGTCTG-TCGGGTC  898

seq1  TGAGCTGGTCAGGCTTACACAGGCTTTGTACAGGGGCCAA  940
      |||| | ||||||||||| | |||||||| || |||||||
seq2  TGAGTTTGTCAGGCTTACCCGGGCTTTGT-CACGGGCCAA  937