BAC Information

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BAC

Clone NameB6Ng01-112B22
Chromosome1 (Build37)
Map Location 104,533,623 - 104,534,621
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041056
Downstream geneLOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112B22.bB6Ng01-112B22.g
ACCDH918274DH918275
length1,214998
definitionDH918274|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B22, 5' end.DH918275|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaccccactctcatcaatggacagatcctggaaacagaaact
aaacagagatacagtgagactaacagaagttaagaaacaaatagatttaa
cagatatctgcagaacattttaccctaaaacaaaaggacgtacattcttc
tcagtacctcatggtacattctacaaaactgaccatatacttggtcacac
aacaggactcaacagatatgaaagtattaaaattatcccatgtatcctat
cagattaccaaggaggaaggctgatcttcaataagaacataaataataga
aagacaacgttgatatggaagctgaaaaacactctactcaatgataggtt
ggtccaggaagaaataaagaaagaaattaaagacattttaccgtttaatg
aaaatgaagccacaatatacccaaacttatgggacacaatgaacttagtc
ctaagagaaaaaaactgatagatctgagtgccaccaaaaggaaactagag
agagcattcacttggagcttgacagcacacataacagcactaaaataaaa
ggaagcaaattcccccaagaggagtagacagcaggaaataataaaaaaac
agtgctgaaatcaaccaagtggaaacaaaaaaacctatacaaagaatcaa
ccaaaccaggtgctggttcttttagaaattcaacaagatagataaaccat
tacccagactagctagagtgcacagggacagtatcctaattaagaaaatc
agaaatgaaagcgagacataacaacagaaaatgaagaaatccaagatatc
atcagatcctactgcaaaagacttatactcaggaaaacctggatgaaatg
gacaatttctagacagataccagggtactagagttaaatcaggatcagat
taaggttctgaacagccccatatcccctaaagaaatagaattagacatta
atagtcttccaggccaaaaccaacaaactatcaactaaaaacaaaaaaaa
acaaaacaaaccctgggaccggatgggttaatgcagagtttctatcatca
gacttttcaagattaattctagtctcctcaaagtattccacaaaagaacg
gatggtactctatccaatcagttcatggaagccaattactctggaaacct
tagtccagtaaggatcacaaagaggggacttcgggccatttccttagtga
aagtttcaagggac
gaattcaaagcttctagaaattaccattatttgtgtgtgtattcatgtgt
gtgtccttatgtgctcatatggaagccagatgttaaagctgggtctcatt
tttctattgacctacacattattaccagtgactgacagagtgtatgtcag
tgaacctgtccctctgcatttcacctaactgtagattctatgagaccaca
tgaaactctattcttcacttcatccctaacattgagatacatccatatgt
tgccaggtttgttgtcttcttgtttcattacaaacacagttcttcaatgc
tgttcactaagtgttttaccattgattcatctccataattctggcaatta
tttttaagcacataattacagcaatttacagctattacatgtgcatgata
tttctttactgtgtattttttattgtaggatatcacataagtactattat
ttaatgtgaatgcaagagttactgtagttaataagagttaattattttta
attttttattagatattttcttcatttacttttgaaatgatatcgtggaa
gtcccctataccctccagcctccctgctcaccaacccacacactcctgct
tgctggtcctggcattcctctctactggggcaaataatcttcacaagatc
aagggcctctcctcccattgatggccaactaggacatcctctgctacata
tgcaactagagacacaagatcttgggggggggggtactagttagttcata
ttgttgattctcctttagggttgcagacccatttagctccttgggtactt
tctctagctcctttattggggtccctatgttccccccaatagatgactgt
aagcatccacttctgtattttgccaggcactgggcatagtctgacagaga
tactatatcagggttcctgtcagcaaaatctttctggcatattgcaatat
gtctgggtttgtgattgttttcagatggatctctgtctgggcagtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104533623_104534621
seq2: B6Ng01-112B22.g_66_1063

seq1  GAATTCAAAGCTTCTAGAAATTACCATTATTTGTGTGTGTATTCATGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTTCTAGAAATTACCATTATTTGTGTGTGTATTCATGTGT  50

seq1  GTGTCCTTATGTGCTCATATGGAAGCCAGATGTTAAAGCTGGGTCTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTTATGTGCTCATATGGAAGCCAGATGTTAAAGCTGGGTCTCATT  100

seq1  TTTCTATTGACCTACACATTATTACCAGTGACTGACAGAGTGTATGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTGACCTACACATTATTACCAGTGACTGACAGAGTGTATGTCAG  150

seq1  TGAACCTGTCCCTCTGCATTTCACCTAACTGTAGATTCTATGAGACCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTGTCCCTCTGCATTTCACCTAACTGTAGATTCTATGAGACCACA  200

seq1  TGAAACTCTATTCTTCACTTCATCCCTAACATTGAGATACATCCATATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCTATTCTTCACTTCATCCCTAACATTGAGATACATCCATATGT  250

seq1  TGCCAGGTTTGTTGTCTTCTTGTTTCATTACAAACACAGTTCTTCAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGTTTGTTGTCTTCTTGTTTCATTACAAACACAGTTCTTCAATGC  300

seq1  TGTTCACTAAGTGTTTTACCATTGATTCATCTCCATAATTCTGGCAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACTAAGTGTTTTACCATTGATTCATCTCCATAATTCTGGCAATTA  350

seq1  TTTTTAAGCACATAATTACAGCAATTTACAGCTATTACATGTGCATGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGCACATAATTACAGCAATTTACAGCTATTACATGTGCATGATA  400

seq1  TTTCTTTACTGTGTATTTTTTATTGTAGGATATCACATAAGTACTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTACTGTGTATTTTTTATTGTAGGATATCACATAAGTACTATTAT  450

seq1  TTAATGTGAATGCAAGAGTTACTGTAGTTAATAAGAGTTAATTATTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGAATGCAAGAGTTACTGTAGTTAATAAGAGTTAATTATTTTTA  500

seq1  ATTTTTTATTAGATATTTTCTTCATTTACTTTTGAAATGATATCGTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTATTAGATATTTTCTTCATTTACTTTTGAAATGATATCGTGGAA  550

seq1  GTCCCCTATACCCTCCAGCCTCCCTGCTCACCAACCCACACACTCCTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTATACCCTCCAGCCTCCCTGCTCACCAACCCACACACTCCTGCT  600

seq1  TGCTGGTCCTGGCATTCCTCTCTACTGGGGCAAATAATCTTCACAAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTCCTGGCATTCCTCTCTACTGGGGCAAATAATCTTCACAAGATC  650

seq1  AAGGGCCTCTCCTCCCATTGATGGCCAACTAGGACATCCTCTGCTACATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCTCTCCTCCCATTGATGGCCAACTAGGACATCCTCTGCTACATA  700

seq1  TGCAACTAGAGACACAAGATCTT-GGGGGGGGGGTACTAGTTAGTTCATA  749
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCAACTAGAGACACAAGATCTTGGGGGGGGGGGTACTAGTTAGTTCATA  750

seq1  TTGTTGATTCTCCTTTAGGGTTGCAGACCCATTTAGCTCCTTGGGTACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGATTCTCCTTTAGGGTTGCAGACCCATTTAGCTCCTTGGGTACTT  800

seq1  TCTCTAGCTCCTTTATTGGGGTCCCTATGTTCCCCCCAATAGATGACTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCTCCTTTATTGGGGTCCCTATGTTCCCCCCAATAGATGACTGT  850

seq1  AAGCATCCACTTCTGTA-TTTGCCAGGCACT-GGCATAGTCTGACAAGAG  897
      ||||||||||||||||| ||||||||||||| ||||||||||||| ||||
seq2  AAGCATCCACTTCTGTATTTTGCCAGGCACTGGGCATAGTCTGAC-AGAG  899

seq1  ATAGCTATATCAGGG-TCCTGTCAGCAAAATCTTTCTGGCATA-TGCAAT  945
      ||| ||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  ATA-CTATATCAGGGTTCCTGTCAGCAAAATCTTTCTGGCATATTGCAAT  948

seq1  AGTGTCTGGGTTTGTTGATTGTTTTCAGGATGGATCTCTGGTCTGGGCAG  995
      | |||||||||||| |||||||||||| ||||||||||| ||||||||||
seq2  A-TGTCTGGGTTTG-TGATTGTTTTCA-GATGGATCTCT-GTCTGGGCAG  994

seq1  TCTC  999
      ||||
seq2  TCTC  998