BAC Information

Click to search

BAC

Clone NameB6Ng01-112J15
Chromosome1 (Build37)
Map Location 26,714,555 - 26,715,068
singlet/doubletsinglet
Overlap genenone
Upstream geneBai3
Downstream gene4931408C20Rik, LOC677427
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112J15.bB6Ng01-112J15.g
ACCDH918624DH918625
length1,042508
definitionDH918624|Mus musculus domesticus DNA, BAC clone: B6Ng01-112J15, 5' end.DH918625|Mus musculus domesticus DNA, BAC clone: B6Ng01-112J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctgaattggttccctaatgataagcatgaggtctgacctga
aatatggttgatattcccaggatagctccacgggaattaactgattggcc
ctttttccaacaagtatcaattgtagatagtttcttaatgagggttagga
ccctgtgttcactttcactttcagtgctgaatctgccctaaacctgtcca
ggtcctttgaatggtgccacagtctctgtgagttaatatgcattatctta
tgcgtctggaacacagtttcctatggagacttccacacctctgactctta
aactatttctgcttcctctgccacatagatcaactgaggagatatatata
tatttctcctaactctgtgatgtatgtagtctcaagttcttggctacttt
tggcaggtattggtctcatctcatggagtgtacatcatagtcatgttttc
aaaagattggttatccctataatccttgtgacaatattgtaccagtgtat
cttgcagttaggtttctggtgtgttttgcctcctttggagttgaatggga
ttggtgactgcaatacactctgcctgtccttgatgcctcaattccatttt
ctcctccaggaaggccttaccatgatagtttaggtatatttggtggttca
atttcattttttttttctccaagaaggccttacgtaccatgataatttac
ctacatatacatcttatcttccatttaagcataaacttcatgtcaggaca
atggaaggttatttctttcttccttgttctatgccatctttcctatagag
cttaggtatacccaagaatcacaccaacctcactggaatgaaatttctca
cagtaagcattaactctcattcagacaatttcacaaacagggccacagcc
aattctactcaggacttcttcattgagtttcctaagataactctgggcta
tgtcagtgacaactgaagaaagtagacagctcacaccatcataaagcagt
tgtattaacaaaataggcatggccctatggctatcgaaagat
acttcagctctagtacagagtgggagaacaaaaaaaaaaaaacaaaacaa
aaaaaaacaaaacaaaaaacaaaaaacacaatgtttcactgctcttaatt
atctgaactggaactaagagtaatttaaacgtgtttaattatagtgatat
tcaaagtatttttggacactgagaaataaaacaaatttaaataatttaat
ttaaataatttttataattctgagttaatgtctactaattaatagcagta
tgccatttgaaattttaaaattaaaattaattaagaattatactaacgca
tataaagtttgtaagaccaaggggcctctcttcccaatgatggccaacta
ggccatcttctgatacatatgcagctagagacacgagctccggggggtac
tggttagttaatattgttgttccacctatagggttgcagacctctttagc
tccttgggtactttctctagctcctccattggggggggggtcagggtatg
ggggactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_26714555_26715068
seq2: B6Ng01-112J15.g_68_581

seq1  GAATTCACTTCAGCTCTAGTACAGAGTGGGAGAACAAAAAAAAAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCAGCTCTAGTACAGAGTGGGAGAACAAAAAAAAAAAAACA  50

seq1  AAACAAAAAAAAACAAAACAAAAAACAAAAAACACAATGTTTCACTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAAAAACAAAACAAAAAACAAAAAACACAATGTTTCACTGCTC  100

seq1  TTAATTATCTGAACTGGAACTAAGAGTAATTTAAACGTGTTTAATTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATCTGAACTGGAACTAAGAGTAATTTAAACGTGTTTAATTATAG  150

seq1  TGATATTCAAAGTATTTTTGGACACTGAGAAATAAAACAAATTTAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTCAAAGTATTTTTGGACACTGAGAAATAAAACAAATTTAAATAA  200

seq1  TTTAATTTAAATAATTTTTATAATTCTGAGTTAATGTCTACTAATTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTAAATAATTTTTATAATTCTGAGTTAATGTCTACTAATTAATA  250

seq1  GCAGTATGCCATTTGAAATTTTAAAATTAAAATTAATTAAGAATTATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGCCATTTGAAATTTTAAAATTAAAATTAATTAAGAATTATACT  300

seq1  AACGCATATAAAGTTTGTAAGACCAAGGGGCCTCTCTTCCCAATGATGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCATATAAAGTTTGTAAGACCAAGGGGCCTCTCTTCCCAATGATGGC  350

seq1  CAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACGAGCTCCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACGAGCTCCGGG  400

seq1  GGGTACTGGTTAGTTAATATTGTTGTTCCACCTATAGGGTTGCAGACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTGGTTAGTTAATATTGTTGTTCCACCTATAGGGTTGCAGACCTC  450

seq1  TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGGGGGGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGGGGGGTCAG  500

seq1  GGTATGGGGGACTT  514
      ||||||||||||||
seq2  GGTATGGGGGACTT  514