BAC Information

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BAC

Clone NameB6Ng01-112N23
Chromosome1 (Build37)
Map Location 121,877,603 - 121,878,562
singlet/doubletsinglet
Overlap geneGm101
Upstream geneGli2, LOC666838, LOC100041778, Inhbb, Ralb, Tmem185b, Epb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863, Tmem177
Downstream geneSctr, Tmem37, Dbi, 3110009E18Rik, Steap3, C1ql2, Marco, En1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112N23.bB6Ng01-112N23.g
ACCDH918818DH918819
length934961
definitionDH918818|Mus musculus domesticus DNA, BAC clone: B6Ng01-112N23, 5' end.DH918819|Mus musculus domesticus DNA, BAC clone: B6Ng01-112N23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccatgcagtatgctcagagatccaggcaacacctctgtgtgtgg
agtgtggatgcatgtgcatgtgaatgttcacgtctgcttgtgtgcacatg
tatatagaggccagcagccaacttcaggtgtccttcttcaggccactgtc
caccttgtattttgagacagagtctctcactggcctggaacacagtgatt
caggtgggatggttagatagcaagcttcagtcacttctccatccctgccc
ctctcaccaactctcttagttaggctttctattgctgtgattaaaaacac
cataaccaaaagcagcttgggcagtgtggtggtttgaatgtgcttagccc
aggaaatggcactgttagaaggtgtggccttgttggcgtagccttgtcag
agaaagtgtgtgactgtaggggtgggcaatgagaccctcctcctaacact
tgggagccagtcttctcctagcagccttcagatgaagatgtagaactctc
tgctcctcctgcaccatgtctgcctggatgctgccatgctcctgccttga
tgatactgtattgaacccctgaacctgtaagccatccccaattaaatgtt
gtccttaaagagttgccttgggccgtggtgtctgttcacatcagtaaaac
actaacctaagaacagggaggaaaggtgttcatttcaccaccacagctta
taagtcctattctatcaccaagggaaaccaggagccttgagttcagaaaa
catatgcaaagtgtgtgagggaatgcttgcttcttggcagaacttgcctc
agtttggctggctcagcccttttttctttttcacccatgaacgaacagcc
catatggcagcatttccacactgattggccctccccacggatactcttaa
tcaagaaaaatgatgcattagcttggcccaaggg
gaattccattgcaaagtttaaaaaaaaaatgtgcatgctttctcttacta
agaatcaagggcctgggctcatgggatgctgattcatgaaataatcaaaa
ataaacctagggcaatgccagaattgatatgtaaatgaaagactgggttt
ttgatcttcaagagatgagctatccagagagagtttttagaattgcaaga
aaaggctgtcttgagagcagaacacacacacacacacacacacacacaca
cacacacacacagagagatagagatagatagatagagagagagagagaaa
gagagagagagagagagatctggaaggctgtctcaacatcagcttataac
ctacaatttgacctcaagtcctttgttttgctgctctcagacactccttc
ctcagaatcccttttcaagctgaggctggtccttgacagcctcacttatg
tgtttcttaatttaaaaaaaaattatttgagtgtatatgcacatgtctgt
ctgcagaagtgaaaagagggttcaggatcccctggagctgaacttaaagt
tcagccacatggtgtgggttctaggatggaaactctggtcctctgccaga
gcagcaagtgttctctactgctgttctccagtcccctgttagcttttcac
atcctgtggtgtcttactggttcactttgggaactcacctttctccgagg
aagacatctgatagatttataaacgtggggaagtccaggttattcaagac
agggtaggcatgaatggggacaagcaaggtgtcatctccctgaaattagt
atggaggaaagttaaatttagtgtttggaaaactatcattttgaactttt
tttaatcattcaagaatttccttaggaaacctttggtgctttaagtaaaa
cattagaactactgggtttcttttgtgagtgtgtacctgtgtgtgtgtgt
gtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_121877603_121878562
seq2: B6Ng01-112N23.g_66_1026

seq1  GAATTCCATTGCAAAGTTTAAAAAAAAAATGTGCATGCTTTCTCTTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGCAAAGTTTAAAAAAAAAATGTGCATGCTTTCTCTTACTA  50

seq1  AGAATCAAGGGCCTGGGCTCATGGGATGCTGATTCATGAAATAATCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAAGGGCCTGGGCTCATGGGATGCTGATTCATGAAATAATCAAAA  100

seq1  ATAAACCTAGGGCAATGCCAGAATTGATATGTAAATGAAAGACTGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCTAGGGCAATGCCAGAATTGATATGTAAATGAAAGACTGGGTTT  150

seq1  TTGATCTTCAAGAGATGAGCTATCCAGAGAGAGTTTTTAGAATTGCAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTTCAAGAGATGAGCTATCCAGAGAGAGTTTTTAGAATTGCAAGA  200

seq1  AAAGGCTGTCTTGAGAGCAGAACACACACACACACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGTCTTGAGAGCAGAACACACACACACACACACACACACACACA  250

seq1  CACACACACACAGAGAGATAGAGATAGATAGATAGAGAGAGAGAGAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAGAGAGATAGAGATAGATAGATAGAGAGAGAGAGAGAAA  300

seq1  GAGAGAGAGAGAGAGAGATCTGGAAGGCTGTCTCAACATCAGCTTATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGATCTGGAAGGCTGTCTCAACATCAGCTTATAAC  350

seq1  CTACAATTTGACCTCAAGTCCTTTGTTTTGCTGCTCTCAGACACTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATTTGACCTCAAGTCCTTTGTTTTGCTGCTCTCAGACACTCCTTC  400

seq1  CTCAGAATCCCTTTTCAAGCTGAGGCTGGTCCTTGACAGCCTCACTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATCCCTTTTCAAGCTGAGGCTGGTCCTTGACAGCCTCACTTATG  450

seq1  TGTTTCTTAATTTAAAAAAAAATTATTTGAGTGTATATGCACATGTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTAATTTAAAAAAAAATTATTTGAGTGTATATGCACATGTCTGT  500

seq1  CTGCAGAAGTGAAAAGAGGGTTCAGGATCCCCTGGAGCTGAACTTAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAAGTGAAAAGAGGGTTCAGGATCCCCTGGAGCTGAACTTAAAGT  550

seq1  TCAGCCACATGGTGTGGGTTCTAGGATGGAAACTCTGGTCCTCTGCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCACATGGTGTGGGTTCTAGGATGGAAACTCTGGTCCTCTGCCAGA  600

seq1  GCAGCAAGTGTTCTCTACTGCTGTTCTCCAGTCCCCTGTTAGCTTTTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAGTGTTCTCTACTGCTGTTCTCCAGTCCCCTGTTAGCTTTTCAC  650

seq1  ATCCTGTGGTGTCTTACTGGTTCACTTTGGGAACTCACCTTTCTCCGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGGTGTCTTACTGGTTCACTTTGGGAACTCACCTTTCTCCGAGG  700

seq1  AAGACATCTGATAGATTTATAAACGTGGGGAAGTCCAGGTTATTCAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCTGATAGATTTATAAACGTGGGGAAGTCCAGGTTATTCAAGAC  750

seq1  AGGGTAGGCATGAATGGGGACAAGCAAGGTGTCATCTCCCTGAAATTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGGCATGAATGGGGACAAGCAAGGTGTCATCTCCCTGAAATTAGT  800

seq1  ATGGAGGAAAGTTAAATTTAGTGTTTGGAAAACTATCATTTTGAACTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAAAGTTAAATTTAGTGTTTGGAAAACTATCATTTTGAACTTTT  850

seq1  TTTAATCATTCAAGAATTTCCTTAGGAAACC-TTGGTGCTTTAAGTAAAA  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTAATCATTCAAGAATTTCCTTAGGAAACCTTTGGTGCTTTAAGTAAAA  900

seq1  CATTAGAACTACTGGGTTTCTTTTGTGAGTGTGTACCTGTGTGTGTGTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAACTACTGGGTTTCTTTTGTGAGTGTGTACCTGTGTGTGTGTGT  950

seq1  GTGTGTGTGTG  960
      |||||||||||
seq2  GTGTGTGTGTG  961