BAC Information

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BAC

Clone NameB6Ng01-112O18
Chromosome1 (Build37)
Map Location 169,986,250 - 170,099,229
singlet/doubletdoublet
Overlap genePbx1
Upstream geneC030014K22Rik, Uck2, LOC100039844, Tmco1, Aldh9a1, Mgst3, Lrrc52, Rxrg, Lmx1a, LOC100039879
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112O18.bB6Ng01-112O18.g
ACCDH918852DH918853
length598455
definitionDH918852|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O18, 5' end.DH918853|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(169,986,250 - 169,986,848)(170,098,769 - 170,099,229)
sequence
gaattccaggctggcattgaactcgctatgtacctgggggtggccttgaa
cctttaatccccctgcctccacctttgagtgctaggattacaggtgtgta
ccccagctctcagttggatgtactattttatattttcagatactgactct
gtttaatgaaatcgtgaaacatgaaacctgtgataaagatactattgtat
ttgttatatattgagtggctaattttaaggcttgtggcgttttaaaaata
gtgtctcagtcagaaaaaaaagccctgtactgcattgtttgatttttcct
ctcagtaagaagtagaatcagaagaaaggctgcagttactaacttggaag
cgacctgtggagagaactcacagaccatgagagaagggcaaacccaccca
ccccttcaagatgtagaagagagagtaacagacagcggccatggccgtgc
tgaggaaagagaaagggtggtgtcagacagaagacaaagcaccctgggaa
ccctgggatctgagggagcatgtgagagaaaaggaggaaggtcagatcag
agaggacagtggaatgagggaaaggctgcgggggggcggggggggggc
agttcaatgtgggatcagccagttggatcatttatcccaagagttttaaa
aatgtatgttttgcttgacttacctagatttggctatatcagtaaacatt
ttcttacatactatacctattgctttccattatagctgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtatgcctgtgcctgtgcctggtatttatgt
gtgtatgtgtgaagtcttaggctgtcatgagtaatttctaaacctatttt
agtggccctcgaacttcaggaactgtggaacaaatatatgatttttgact
gctgtattgatatgtgtggggacaggggaggttctttgaatgtcatgagt
aatttctgaaactgtggcacttaaaacttaaacatgaggaaatgtcaaaa
gtgtatatgggttggttttttttttgactgctgtattgatgtgtgtgtgt
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_169986250_169986848
seq2: B6Ng01-112O18.b_33_631

seq1  GGAATTCCAGGCTGGCATTGAACTCGCTATGTACCTGGGGGTGGCCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCAGGCTGGCATTGAACTCGCTATGTACCTGGGGGTGGCCTTGA  50

seq1  ACCTTTAATCCCCCTGCCTCCACCTTTGAGTGCTAGGATTACAGGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAATCCCCCTGCCTCCACCTTTGAGTGCTAGGATTACAGGTGTGT  100

seq1  ACCCCAGCTCTCAGTTGGATGTACTATTTTATATTTTCAGATACTGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGCTCTCAGTTGGATGTACTATTTTATATTTTCAGATACTGACTC  150

seq1  TGTTTAATGAAATCGTGAAACATGAAACCTGTGATAAAGATACTATTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATGAAATCGTGAAACATGAAACCTGTGATAAAGATACTATTGTA  200

seq1  TTTGTTATATATTGAGTGGCTAATTTTAAGGCTTGTGGCGTTTTAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATATATTGAGTGGCTAATTTTAAGGCTTGTGGCGTTTTAAAAAT  250

seq1  AGTGTCTCAGTCAGAAAAAAAAGCCCTGTACTGCATTGTTTGATTTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCAGTCAGAAAAAAAAGCCCTGTACTGCATTGTTTGATTTTTCC  300

seq1  TCTCAGTAAGAAGTAGAATCAGAAGAAAGGCTGCAGTTACTAACTTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAAGAAGTAGAATCAGAAGAAAGGCTGCAGTTACTAACTTGGAA  350

seq1  GCGACCTGTGGAGAGAACTCACAGACCATGAGAGAAGGGCAAACCCACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACCTGTGGAGAGAACTCACAGACCATGAGAGAAGGGCAAACCCACCC  400

seq1  ACCCCTTCAAGATGTAGAAGAGAGAGTAACAGACAGCGGCCATGGCCGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCAAGATGTAGAAGAGAGAGTAACAGACAGCGGCCATGGCCGTG  450

seq1  CTGAGGAAAGAGAAAGGGTGGTGTCAGACAGAAGACAAAGCACCCTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAAAGAGAAAGGGTGGTGTCAGACAGAAGACAAAGCACCCTGGGA  500

seq1  ACCCTGGGATCTGAGGGAGCATGTGAGAGAAAAGGAGGAAGGTCAGATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGGATCTGAGGGAGCATGTGAGAGAAAAGGAGGAAGGTCAGATCA  550

seq1  GAGAGGACAGTGGAATGAGGGAAAGGCTGCGGGGGGGCGGGGGGGGGGC  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACAGTGGAATGAGGGAAAGGCTGCGGGGGGGCGGGGGGGGGGC  599

seq1: chr1_170098769_170099229
seq2: B6Ng01-112O18.g_70_530 (reverse)

seq1  CACACACACACACACATCAATACAGCAGTCAAAAAAAAAACCAACCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATCAATACAGCAGTCAAAAAAAAAACCAACCCATA  50

seq1  TACACTTTTGACATTTCCTCATGTTTAAGTTTTAAGTGCCACAGTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTTGACATTTCCTCATGTTTAAGTTTTAAGTGCCACAGTTTCAG  100

seq1  AAATTACTCATGACATTCAAAGAACCTCCCCTGTCCCCACACATATCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTCATGACATTCAAAGAACCTCCCCTGTCCCCACACATATCAAT  150

seq1  ACAGCAGTCAAAAATCATATATTTGTTCCACAGTTCCTGAAGTTCGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTCAAAAATCATATATTTGTTCCACAGTTCCTGAAGTTCGAGGG  200

seq1  CCACTAAAATAGGTTTAGAAATTACTCATGACAGCCTAAGACTTCACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAAATAGGTTTAGAAATTACTCATGACAGCCTAAGACTTCACACA  250

seq1  TACACACATAAATACCAGGCACAGGCACAGGCATACACACACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACATAAATACCAGGCACAGGCACAGGCATACACACACACACACAC  300

seq1  ACACACACACACACACACAGCTATAATGGAAAGCAATAGGTATAGTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACAGCTATAATGGAAAGCAATAGGTATAGTATGT  350

seq1  AAGAAAATGTTTACTGATATAGCCAAATCTAGGTAAGTCAAGCAAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGTTTACTGATATAGCCAAATCTAGGTAAGTCAAGCAAAACAT  400

seq1  ACATTTTTAAAACTCTTGGGATAAATGATCCAACTGGCTGATCCCACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTAAAACTCTTGGGATAAATGATCCAACTGGCTGATCCCACATT  450

seq1  GAACTGAATTC  461
      |||||||||||
seq2  GAACTGAATTC  461