BAC Information

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BAC

Clone NameB6Ng01-113J24
Chromosome1 (Build37)
Map Location 63,930,133 - 63,931,225
singlet/doubletsinglet
Overlap genenone
Upstream geneA430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik
Downstream geneLOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1, LOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113J24.bB6Ng01-113J24.g
ACCDH919372DH919373
length1,08881
definitionDH919372|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J24, 5' end.DH919373|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatccaaagccaaagaaatacttacatctcctttgttctaaca
atgctgagagagttaattttcaaggaactgcctctagttaccttcaatgc
agctaagcaaatatcccccccatcattcagctttctagatgggcttaatg
gattccaaattccaatggaacattacaaaaccttcaaggatatttatgtt
gaggtctctttctttgtcatgacacagaggttatggacactcagtgctcc
ctatagagagatggggttcactgatgctccaaatgttcctatctccagat
cccaccctgatgatatctaaagaatcagccacatggcgagccttgcattc
cctttgtacaatacctgattattcatctcgctttgagatgaagcattctc
aattatgcaatcacacacacacacacacacacacacacacacacagagag
agagagagagagagacagagagagagagagagacagagacagagacagag
acagagacagagacacagagagagaaaaatcccaagttttagggcacaat
gatgtaatagcctgcctctcttctctacaaaaacaatgttatccataatt
tattgatgtgaaatgatctgtcctataataccaagaggaaagaacagatg
ttgctatttttcaaaagatggacgtagaagcattttttttcttcatgtgt
atgtgtgtgtgaaggccagaagttaacattgggtgtcttcctcaatcact
ttgcttaatgaagcagggtttctttctcttgttgaacccagagtttgcag
acatagctactatagtcatattgccctaagagttcccctgtctctgcctg
cagagcactgagattacatgtgggctgccacacccatctggctttacata
ggtgctggaaatctcaactctggtcctcacatatgcttagcaggtactct
atcactgacaggtctcccagctcctcccatatatttttgtttgtgttcag
taaaaacacagaactggtgctgctttttgaagatagccagggaaagatta
tggtacaatttttgatttatgggtgcacttgtactgtc
aaggctatcttgggctacatagagagacttctttaaagaaagaaataaag
gaaggaagggaggaagggagggagagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_63930133_63931225
seq2: B6Ng01-113J24.b_49_1136

seq1  GAATTCTCATCCAAAGCCAAAGAAATACTTACATCTCCTTTGTTCTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCCAAAGCCAAAGAAATACTTACATCTCCTTTGTTCTAACA  50

seq1  ATGCTGAGAGAGTTAATTTTCAAGGAACTGCCTCTAGTTACCTTCAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGAGAGTTAATTTTCAAGGAACTGCCTCTAGTTACCTTCAATGC  100

seq1  AGCTAAGCAAATATCCCCCCCATCATTCAGCTTTCTAGATGGGCTTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGCAAATATCCCCCCCATCATTCAGCTTTCTAGATGGGCTTAATG  150

seq1  GATTCCAAATTCCAATGGAACATTACAAAACCTTCAAGGATATTTATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAAATTCCAATGGAACATTACAAAACCTTCAAGGATATTTATGTT  200

seq1  GAGGTCTCTTTCTTTGTCATGACACAGAGGTTATGGACACTCAGTGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCTTTCTTTGTCATGACACAGAGGTTATGGACACTCAGTGCTCC  250

seq1  CTATAGAGAGATGGGGTTCACTGATGCTCCAAATGTTCCTATCTCCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAGAGATGGGGTTCACTGATGCTCCAAATGTTCCTATCTCCAGAT  300

seq1  CCCACCCTGATGATATCTAAAGAATCAGCCACATGGCGAGCCTTGCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCTGATGATATCTAAAGAATCAGCCACATGGCGAGCCTTGCATTC  350

seq1  CCTTTGTACAATACCTGATTATTCATCTCGCTTTGAGATGAAGCATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTACAATACCTGATTATTCATCTCGCTTTGAGATGAAGCATTCTC  400

seq1  AATTATGCAATCACACACACACACACACACACACACACACACACAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGCAATCACACACACACACACACACACACACACACACACAGAGAG  450

seq1  AGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGACAGAGACAGAGACAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGACAGAGACAGAGACAGAG  500

seq1  ACAGAGACAGAGACACAGAGAGAGAAAAATCCCAAGTTTTAGGGCACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAGAGACACAGAGAGAGAAAAATCCCAAGTTTTAGGGCACAAT  550

seq1  GATGTAATAGCCTGCCTCTCTTCTCTACAAAAACAATGTTATCCATAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAATAGCCTGCCTCTCTTCTCTACAAAAACAATGTTATCCATAATT  600

seq1  TATTGATGTGAAATGATCTGTCCTATAATACCAAGAGGAAAGAACAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGTGAAATGATCTGTCCTATAATACCAAGAGGAAAGAACAGATG  650

seq1  TTGCTATTTTTCAAAAGATGGACGTAGAAGCATTTTTTTTCTTCATGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTTTTCAAAAGATGGACGTAGAAGCATTTTTTTTCTTCATGTGT  700

seq1  ATGTGTGTGTGAAGGCCAGAAGTTAACATTGGGTGTCTTCCTCAATCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTGAAGGCCAGAAGTTAACATTGGGTGTCTTCCTCAATCACT  750

seq1  TTGCTTAATGAAGCAGGGTTTCTTTCTCTTGTTGAACCCAGAGTTTGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAATGAAGCAGGGTTTCTTTCTCTTGTTGAACCCAGAGTTTGCAG  800

seq1  ACATAGCTACTATAGTCATATTGCCCTAAGAGTTCCCCTGTCTCTGCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCTACTATAGTCATATTGCCCTAAGAGTTCCCCTGTCTCTGCCTG  850

seq1  CAGAGCACTGAGATTACATGTGGGCTGCCACACCCATCTGGCTTTTACAT  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGAGCACTGAGATTACATGTGGGCTGCCACACCCATCTGGC-TTTACAT  899

seq1  AGGTGCTGGAAATCTCAACTCTGGTCCTCACATATGCTTAGCAGGTACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTGGAAATCTCAACTCTGGTCCTCACATATGCTTAGCAGGTACTC  949

seq1  TATCCACTGACAGGTCTCCCCAGCTCCTCCCATATATTTTTGTTTGTGTT  1000
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAT-CACTGACAGGTCT-CCCAGCTCCTCCCATATATTTTTGTTTGTGTT  997

seq1  CAGT-AAAACACAGGAACTGGTTGGCTGC-TTTTGAAGATAGCCAGGGAT  1048
      |||| |||||||| ||||||||  ||||| ||||||||||||||||||| 
seq2  CAGTAAAAACACA-GAACTGGT--GCTGCTTTTTGAAGATAGCCAGGGAA  1044

seq1  AGATTATGGTACATTTTTTGTATTTATGGGTGCACTGTAACTGTC  1093
      ||||||||||||| |||||| |||||||||||||||   ||||||
seq2  AGATTATGGTACAATTTTTG-ATTTATGGGTGCACTTGTACTGTC  1088