BAC Information

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BAC

Clone NameB6Ng01-113M08
Chromosome1 (Build37)
Map Location 150,588,232 - 150,743,918
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647, LOC100042813, Pla2g4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113M08.bB6Ng01-113M08.g
ACCDH919480DH919481
length1,0871,154
definitionDH919480|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M08, 5' end.DH919481|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,588,232 - 150,589,332)(150,742,747 - 150,743,918)
sequence
gaattcttctggggagatataatgtgggcctgcactcacccctgagaagc
acatgataaacctagctatggatcacactattgtacaatatgtaaatcaa
agcattttgttgtgattatttacagaaattatttatagcatcctgtaggt
aagaatcaggttttattcatatttcccacagtggtgtgacttatttttta
agtttaaaactatcatatttaatattttatatggtccaatgtggtaacac
actgtataagatataacaatcaagtcaggccaagtaacattcgtagcatt
ctatatccacaaatacttattgtttccttatcttgggagacactaaaatc
ttgtcatttaatatttttcaaaccacatagtaatttattatgaactatag
tcatcctactacaacatccaatactaaaataatatgctttctatttaaca
gtttttaaaaaaaaattctcttctctcatacatctggagtagcacctagg
acaatctcaagcatacttaggaaacagatttctattctatactgaaacta
ttcccaatattgctaagtcttacagtcagcgatgcactgtggagtatttt
ccagcttgctaagtactctacatccatttcaccaaatcttcataactctc
aaacatgtttgattattttcaatatagcaagtttcatacacaccactttt
ctcatctattagaagtaggtccctgggaagaaagacatatataataaaaa
ggtatttgaatgcacgtacaaattccccaaagaaaaaattattttgaata
taaatataagtaaattaagttttcagaagacatataaaatataaggcatt
ctaaaagaatataagacctagaaactgtatttttccacattaattgcagg
gatacctaagaaaaactctgaattggtattaaaattgcttttttcccctc
cgttaagcctgaaactaccaatatccatctgttaataacggttttcttag
attgaagattcatctcatggaagctccttaaaggaaactttagcactcaa
atacattttggaattccttgaaatggatcagtcagta
gaattctttgtttagctctgtactccatttttaatagggttatttggttc
tctggagtctaatttcttgagttctttgtatatattggatattagccctc
tatcaggtgtagggttggtgaagaccttttcccaatctgtcggttgccat
tttgtcctaaaaccaaatatttctgttatctgtacttctttttcatgttt
tcattttctgctttccattttactgtattaatatattttacgatttttct
tattgtatttgtgttataaatatgtgtttttgtttctactacttagaata
tatggtgataatataaaattttattttctgtcataattttcacaattctt
tgcatatgtaatcactgataatcttgcctttggcaaatcatattattttt
aataatgatgctttttttggattgacatcttgtatatctataatttaata
ttttaatttgaaatcagaagtctgttacatgaaatacctcaaacctaaaa
ccagttcctattatctacatgaatcatttgatgaggtcttaatacgaata
ataaaaaacaatgatggaagaatatcttatcaggattatattttaccttt
ctgactcacttttctcactgttctgaggtattattgtggttgttctagtt
gttttagggcttgaacactgagcctcatgaatattacaacttggtttact
gcagcttggccaattcattggtatccccttagttcagttgacattttaga
aagccgttcatattggtgagacattatctgtgtagcttctgactttgctg
agggacatgattcaattccctcttcttttcttattcatctttctcataca
tttcaaattcaataatatttcttaccactttagagtttgacctttaaaga
gggtaacagatttaagtcattcataatttaggctttgtagtgtatcttat
ctacaatataaaattaagttatgtattttttttttggcttaaaagttata
gtataaaaacaaaccacccacaaccaaccacaaagaaaactaaattcttt
acaccagagagtttagaattccagaaaattgatcacctattagtgttccc
atattggcatggcatcttcctacatcatgagtgggtaacattgtttagtg
tcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150588232_150589332
seq2: B6Ng01-113M08.b_47_1133

seq1  GAATTCTTCTGGGGAGATATAATGTGGGCCTGCACTCACCCCTGAGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGGGAGATATAATGTGGGCCTGCACTCACCCCTGAGAAGC  50

seq1  ACATGATAAACCTAGCTATGGATCACACTATTGTACAATATGTAAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATAAACCTAGCTATGGATCACACTATTGTACAATATGTAAATCAA  100

seq1  AGCATTTTGTTGTGATTATTTACAGAAATTATTTATAGCATCCTGTAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTGTTGTGATTATTTACAGAAATTATTTATAGCATCCTGTAGGT  150

seq1  AAGAATCAGGTTTTATTCATATTTCCCACAGTGGTGTGACTTATTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCAGGTTTTATTCATATTTCCCACAGTGGTGTGACTTATTTTTTA  200

seq1  AGTTTAAAACTATCATATTTAATATTTTATATGGTCCAATGTGGTAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAAACTATCATATTTAATATTTTATATGGTCCAATGTGGTAACAC  250

seq1  ACTGTATAAGATATAACAATCAAGTCAGGCCAAGTAACATTCGTAGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATAAGATATAACAATCAAGTCAGGCCAAGTAACATTCGTAGCATT  300

seq1  CTATATCCACAAATACTTATTGTTTCCTTATCTTGGGAGACACTAAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCCACAAATACTTATTGTTTCCTTATCTTGGGAGACACTAAAATC  350

seq1  TTGTCATTTAATATTTTTCAAACCACATAGTAATTTATTATGAACTATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTTAATATTTTTCAAACCACATAGTAATTTATTATGAACTATAG  400

seq1  TCATCCTACTACAACATCCAATACTAAAATAATATGCTTTCTATTTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTACTACAACATCCAATACTAAAATAATATGCTTTCTATTTAACA  450

seq1  GTTTTTAAAAAAAAATTCTCTTCTCTCATACATCTGGAGTAGCACCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAAAAAAAATTCTCTTCTCTCATACATCTGGAGTAGCACCTAGG  500

seq1  ACAATCTCAAGCATACTTAGGAAACAGATTTCTATTCTATACTGAAACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTCAAGCATACTTAGGAAACAGATTTCTATTCTATACTGAAACTA  550

seq1  TTCCCAATATTGCTAAGTCTTACAGTCAGCGATGCACTGTGGAGTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATATTGCTAAGTCTTACAGTCAGCGATGCACTGTGGAGTATTTT  600

seq1  CCAGCTTGCTAAGTACTCTACATCCATTTCACCAAATCTTCATAACTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGCTAAGTACTCTACATCCATTTCACCAAATCTTCATAACTCTC  650

seq1  AAACATGTTTGATTATTTTCAATATAGCAAGTTTCATACACACCACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTTGATTATTTTCAATATAGCAAGTTTCATACACACCACTTTT  700

seq1  CTCATCTATTAGAAGTAGGTCCCTGGGAAGAAAGACATATATAATAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTATTAGAAGTAGGTCCCTGGGAAGAAAGACATATATAATAAAAA  750

seq1  GGTA-TTGAATGCACGTACAAATTCCCCAAAGAAAAAATTATTTTGAATA  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTGAATGCACGTACAAATTCCCCAAAGAAAAAATTATTTTGAATA  800

seq1  TAAATATAAGTAAATTAAGTTTTCAGAAGACATATAAAATATAAGGCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAAGTAAATTAAGTTTTCAGAAGACATATAAAATATAAGGCATT  850

seq1  CTAAAAGAATATAAGACCTAGAAACTGTATTTTTCCACATTTAATTGCAG  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTAAAAGAATATAAGACCTAGAAACTGTATTTTTCCACA-TTAATTGCAG  899

seq1  GGATACCTAAGAAAAACTCTGAATTGGTATTAAAATTGCTTTTTTTCCCC  949
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  GGATACCTAAGAAAAACTCTGAATTGGTATTAAAATTGCTTTTTT--CCC  947

seq1  CTCCGTTAAGCCTGAAACTTACCAAATATCCATCTGTTAAATAACGGTTT  999
      |||||||||||||||||| |||| |||||||||||||| |||||||||||
seq2  CTCCGTTAAGCCTGAAAC-TACC-AATATCCATCTGTT-AATAACGGTTT  994

seq1  TCTTAAGATTGAAAGATTCCATCCTTCATGGAAGCTCCTTAAAGGGAAAC  1049
      |||| |||||| |||||| ||||  |||||||||||||||||| ||||||
seq2  TCTT-AGATTG-AAGATT-CATC--TCATGGAAGCTCCTTAAA-GGAAAC  1038

seq1  TTTAGCAACTCAAAATACATTTTGGAAATCCCTGAAATGGATCAGTTCAG  1099
      |||||| |||| ||||||||||||||| ||| ||||||||||||| ||||
seq2  TTTAGC-ACTC-AAATACATTTTGGAATTCCTTGAAATGGATCAG-TCAG  1085

seq1  TA  1101
      ||
seq2  TA  1087

seq1: chr1_150742747_150743918
seq2: B6Ng01-113M08.g_69_1222 (reverse)

seq1  CTGACAACTAAACAAATGTACCACACTCATGTATGTAGGAAAGATGCATG  50
      ||||| ||||||| |||||  | |||||||| ||||||| |||||||   
seq2  CTGAC-ACTAAAC-AATGTTACCCACTCATG-ATGTAGG-AAGATGCCAT  46

seq1  GGCACATATGGGAACACTATATAGGTTGATCAATTTTTCTGGAATTCTAA  100
      | || |||||||||||||| ||||| ||||||| ||||||||||||||||
seq2  GCCA-ATATGGGAACACTA-ATAGG-TGATCAA-TTTTCTGGAATTCTAA  92

seq1  AACTGCTCT-TGGTGTAAAGTATTTTAGTTTTCTTTGTTGGTTGGTTGGT  149
      |    |||| |||||||||| | |||||||||||||| ||||||||||  
seq2  A----CTCTCTGGTGTAAAG-AATTTAGTTTTCTTTG-TGGTTGGTTG--  134

seq1  TGGTTGGTTTGTTTTTATACTATAAACTTTTAAGCCAAAACAAAAATACA  199
      ||| ||||||||||||||||||| |||||||||||||||| |||||||||
seq2  TGGGTGGTTTGTTTTTATACTAT-AACTTTTAAGCCAAAAAAAAAATACA  183

seq1  TAACTT-ATTTTATATTTGTAGATAAGATACACTACAAAGCCTAAATTAT  248
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  TAACTTAATTTTATA-TTGTAGATAAGATACACTACAAAGCCTAAATTAT  232

seq1  GAATGACTTTAATTCTGTTACCCTCTTTAAAGGTCAAAACTCTAAAGTGG  298
      ||||||| |||| |||||||||||||||||||||| |||||||||||| |
seq2  GAATGAC-TTAAATCTGTTACCCTCTTTAAAGGTC-AAACTCTAAAGT-G  279

seq1  GTAAGAAATATTATTGAATTTGAAATGTATGAGAAAGATGAATAAGAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAATATTATTGAATTTGAAATGTATGAGAAAGATGAATAAGAAAA  329

seq1  GAAGAGGGAATTGAATCATGTCCCTCAGCAAAGTCAGAAGCTACACAGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGAATTGAATCATGTCCCTCAGCAAAGTCAGAAGCTACACAGAT  379

seq1  AATGTCTCACCAATATGAACGGCTTTCT-AAATGTCAACTGAACTAAGGG  447
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATGTCTCACCAATATGAACGGCTTTCTAAAATGTCAACTGAACTAAGGG  429

seq1  GATACCAATGAATTGGCCAAGCTGCAGTAAACCAAGTTGTAATATTCATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCAATGAATTGGCCAAGCTGCAGTAAACCAAGTTGTAATATTCATG  479

seq1  AGGCTCAGTGTTCAAGCCCTAAAACAACTAGAACAACCACAATAATACCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGTGTTCAAGCCCTAAAACAACTAGAACAACCACAATAATACCT  529

seq1  CAGAACAGTGAGAAAAGTGAGTCAGAAAGGTAAAATATAATCCTGATAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGTGAGAAAAGTGAGTCAGAAAGGTAAAATATAATCCTGATAAG  579

seq1  ATATTCTTCCATCATTGTTTTTTATTATTCGTATTAAGACCTCATCAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTCCATCATTGTTTTTTATTATTCGTATTAAGACCTCATCAAAT  629

seq1  GATTCATGTAGATAATAGGAACTGGTTTTAGGTTTGAGGTATTTCATGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGTAGATAATAGGAACTGGTTTTAGGTTTGAGGTATTTCATGTA  679

seq1  ACAGACTTCTGATTTCAAATTAAAATATTAAATTATAGATATACAAGATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTTCTGATTTCAAATTAAAATATTAAATTATAGATATACAAGATG  729

seq1  TCAATCCAAAAAAAGCATCATTATTAAAAATAATATGATTTGCCAAAGGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCAAAAAAAGCATCATTATTAAAAATAATATGATTTGCCAAAGGC  779

seq1  AAGATTATCAGTGATTACATATGCAAAGAATTGTGAAAATTATGACAGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTATCAGTGATTACATATGCAAAGAATTGTGAAAATTATGACAGAA  829

seq1  AATAAAATTTTATATTATCACCATATATTCTAAGTAGTAGAAACAAAAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTTTATATTATCACCATATATTCTAAGTAGTAGAAACAAAAAC  879

seq1  ACATATTTATAACACAAATACAATAAGAAAAATCGTAAAATATATTAATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTATAACACAAATACAATAAGAAAAATCGTAAAATATATTAATA  929

seq1  CAGTAAAATGGAAAGCAGAAAATGAAAACATGAAAAAGAAGTACAGATAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAATGGAAAGCAGAAAATGAAAACATGAAAAAGAAGTACAGATAA  979

seq1  CAGAAATATTTGGTTTTAGGACAAAATGGCAACCGACAGATTGGGAAAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATATTTGGTTTTAGGACAAAATGGCAACCGACAGATTGGGAAAAG  1029

seq1  GTCTTCACCAACCCTACACCTGATAGAGGGCTAATATCCAATATATACAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCACCAACCCTACACCTGATAGAGGGCTAATATCCAATATATACAA  1079

seq1  AGAACTCAAGAAATTAGACTCCAGAGAACCAAATAACCCTATTAAAAATG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAAGAAATTAGACTCCAGAGAACCAAATAACCCTATTAAAAATG  1129

seq1  GAGTACAGAGCTAAACAAAGAATTC  1172
      |||||||||||||||||||||||||
seq2  GAGTACAGAGCTAAACAAAGAATTC  1154