BAC Information

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BAC

Clone NameB6Ng01-114K01
Chromosome1 (Build37)
Map Location 108,087,124 - 108,211,285
singlet/doubletdoublet
Overlap genePhlpp
Upstream geneRnf152, LOC100041985, Pign, LOC666249, 2310035C23Rik, LOC100042023, Tnfrsf11a, EG635504, Zcchc2, EG435634
Downstream geneLOC626075, Bcl2, LOC100042085, Fvt1, Vps4b, Serpinb5, LOC671141, Serpinb12, Serpinb13, LOC666394, Serpinb3a, Serpinb3d, LOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114K01.bB6Ng01-114K01.g
ACCDH920103DH920104
length1,0461,094
definitionDH920103|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K01, 5' end.DH920104|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,087,124 - 108,088,173)(108,210,178 - 108,211,285)
sequence
gaattctttaaatgagggggagagatgagttagaatttgaatatgtccag
tgtggtatactaaaggacatcaggcatgtcaaagctcaggcatcatttat
attaaagcattagagtttttggtggaatttgggaatgtagtgccctagtt
tgcatctctatccctgtgattaaacactgacgaaaagaagcttggagagg
aagttgtttatttaatttacatgatagtttgtcatgaaggaaagtcaggg
caggaacctgaggcagggactgaaccataacagtggaggaacactgctca
caggcttgctcccgtggcttgctcagcctgctttcttacacacccaggac
ctcccacccagggatggtattgctcacaatgggctgggtcctcccacatc
aatcattaattaaggcgggaggccaacctgatggaggcagttccttaagg
atccctcttcccaggtgattcttctttaggtcaagttgacacaaaggaat
aagacagagtgttatacagggtgcacatagttctgaggaagcagctctga
cgaatgcttttatttaaaaagtgttgatgggttaatattgagtgaaaaaa
gtcagacacagaagagatgtagtctatatgataggcagttaatagccaac
ttttggtgttgtagctgtcaaagcgttagcaatgggaaacgacattgagt
caccgagtctttgtattgatctgaagtttagttttcttgagtgaagattt
atggaactgaactctctacaggtggtgaggttgagtacatacaagatgga
agagaggtaaaaggtcctgagaggagcattgttactgttctgagatgagg
gaaagagacggaggcaaaggatgatggatgaacggagaagaaaaacaaag
gatggaattcctagaagaaacaaatggaggcagaacccacttggatccat
gttaaccttgaccatccagacatttccctgagacagaagatgagtgagaa
aaagttcttggattctggagagagtgctcagcaatgaggagtactc
gaattctgcacataaacgagaagacggttgtgacttagcatgagtcacta
acagctctggtccaaccttgagtgctttaggaaatgatgtccctggctaa
ggagacagcctctgtgagttcactcggctttgggaaggatgctcaacttc
agctcatctagttctaacacccctacccatcaatgctttggaaaagtagg
agcagaataaaacttgttaatcattctcagacattctaatacttttcttg
ttccagctttacactcagcagcgccatctctgctaattcccactgcttca
tgacatgcaatcatttctttcctcacactgtatgaaatgtatttgcccca
gaactttcacagtgacattaaattactcaatgctaattctcactttataa
attctgcgtaactacagatagagaataaagttaattaaaagacttttgtg
tgaatgttactgtttctttttcttttcttttccttttttcttttcttttc
tttttttttttttttgagaaagtctcactgtgtcctaataaaagtagcat
tttaagctactagttttagatgaagcaaattttacatagaatttaaatac
tttaacattcctttcctttaaaaggttcaatgatttggagtcatatgaga
aataaagtatgtaatttatcctccattctaaattattagcagttatggca
tgtaaaagcaatgaaggcaatagcaaaatccagagacacagagagacaac
atacaaaaattagagatctgcagctggagctgacactgtcacacagccct
ctatacccaaatcccacagggacagagctggtctcccaagattgctgaca
aaacctgagaacacaggtaagatcaccacttctgctcaaatacttagccc
agagggaccccgcccagaggcctcaggaaacagaatggaggagcagcatt
tgcaccctgagattaccctggtgtcacagctctccattaaccagctcggg
ctgaaaacaaccaagtagaaacaaaagacttatacaggatcaacaaacag
gagctgtttttgaaaatcacaagataagataaccttagcgacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_108087124_108088173
seq2: B6Ng01-114K01.b_45_1090

seq1  GAATTCTTTAAATGAGGGGGAGAGATGAGTTAGAATTTGAATATGTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAATGAGGGGGAGAGATGAGTTAGAATTTGAATATGTCCAG  50

seq1  TGTGGTATACTAAAGGACATCAGGCATGTCAAAGCTCAGGCATCATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATACTAAAGGACATCAGGCATGTCAAAGCTCAGGCATCATTTAT  100

seq1  ATTAAAGCATTAGAGTTTTTGGTGGAATTTGGGAATGTAGTGCCCTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGCATTAGAGTTTTTGGTGGAATTTGGGAATGTAGTGCCCTAGTT  150

seq1  TGCATCTCTATCCCTGTGATTAAACACTGACGAAAAGAAGCTTGGAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTCTATCCCTGTGATTAAACACTGACGAAAAGAAGCTTGGAGAGG  200

seq1  AAGTTGTTTATTTAATTTACATGATAGTTTGTCATGAAGGAAAGTCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTTATTTAATTTACATGATAGTTTGTCATGAAGGAAAGTCAGGG  250

seq1  CAGGAACCTGAGGCAGGGACTGAACCATAACAGTGGAGGAACACTGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACCTGAGGCAGGGACTGAACCATAACAGTGGAGGAACACTGCTCA  300

seq1  CAGGCTTGCTCCCGTGGCTTGCTCAGCCTGCTTTCTTACACACCCAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTGCTCCCGTGGCTTGCTCAGCCTGCTTTCTTACACACCCAGGAC  350

seq1  CTCCCACCCAGGGATGGTATTGCTCACAATGGGCTGGGTCCTCCCACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCCAGGGATGGTATTGCTCACAATGGGCTGGGTCCTCCCACATC  400

seq1  AATCATTAATTAAGGCGGGAGGCCAACCTGATGGAGGCAGTTCCTTAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTAATTAAGGCGGGAGGCCAACCTGATGGAGGCAGTTCCTTAAGG  450

seq1  ATCCCTCTTCCCAGGTGATTCTTCTTTAGGTCAAGTTGACACAAAGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCTTCCCAGGTGATTCTTCTTTAGGTCAAGTTGACACAAAGGAAT  500

seq1  AAGACAGAGTGTTATACAGGGTGCACATAGTTCTGAGGAAGCAGCTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAGTGTTATACAGGGTGCACATAGTTCTGAGGAAGCAGCTCTGA  550

seq1  CGAATGCTTTTATTTAAAAAGTGTTGATGGGTTAATATTGAGTGAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGCTTTTATTTAAAAAGTGTTGATGGGTTAATATTGAGTGAAAAAA  600

seq1  GTCAGACACAGAAGAGATGTAGTCTATATGATAGGCAGTTAATAGCCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACACAGAAGAGATGTAGTCTATATGATAGGCAGTTAATAGCCAAC  650

seq1  TTTTGGTGTTGTAGCTGTCAAAGCGTTAGCAATGGGAAACGACATTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGTTGTAGCTGTCAAAGCGTTAGCAATGGGAAACGACATTGAGT  700

seq1  CACCGAGTCTTTGTATTGATCTGAAGTTTAGTTTTCTTGAGTGAAGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGAGTCTTTGTATTGATCTGAAGTTTAGTTTTCTTGAGTGAAGATTT  750

seq1  ATGGAACTGAACTCTCTACAGGTGGTGAGGTTGAGTACATACAAGATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTGAACTCTCTACAGGTGGTGAGGTTGAGTACATACAAGATGGA  800

seq1  AGAGAGGTAAAAGGTCCTGAGAGGAGCATTGTTACTGTTCTGAGATGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTAAAAGGTCCTGAGAGGAGCATTGTTACTGTTCTGAGATGAGG  850

seq1  GAAAGAGACGGAGGCAAAGGATGATGGATGAACGGAGAAGAAAAACAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGACGGAGGCAAAGGATGATGGATGAACGGAGAAGAAAAACAAAG  900

seq1  GAAGGGAATTCCTAGAAGAAACAAATGGAGGCAGAACCCACTTGGATCCA  950
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-ATGGAATTCCTAGAAGAAACAAATGGAGGCAGAACCCACTTGGATCCA  949

seq1  TGTTAACCTTGAACCATCCAGACATTTCCCTGAGACAGAAGGATGAGTGA  1000
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  TGTTAACCTTG-ACCATCCAGACATTTCCCTGAGACAGAA-GATGAGTGA  997

seq1  AGAAAAAAGTTCTTGGA-TCTGGAGAGAGTGCTCAGCAATGAGGAGTACT  1049
         |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  --GAAAAAGTTCTTGGATTCTGGAGAGAGTGCTCAGCAATGAGGAGTACT  1045

seq1  C  1050
      |
seq2  C  1046

seq1: chr1_108210178_108211285
seq2: B6Ng01-114K01.g_66_1159 (reverse)

seq1  TAGTCTGGCTAAGGGTTTATC-TATCTTGTTGATTTTCTCAAAAAAACAG  49
      |||||  |||||||  ||||| ||||||| ||||||||    ||||||||
seq2  TAGTC--GCTAAGG--TTATCTTATCTTG-TGATTTTC----AAAAACAG  41

seq1  CTCCTGGTTTTGTTGATTCTTTGTATAGTTCTTTTTGTTTCTACTTGGTT  99
      ||||||  ||||||||| |  ||||||  || ||||||||||||||||||
seq2  CTCCTG--TTTGTTGATCC--TGTATAAGTC-TTTTGTTTCTACTTGGTT  86

seq1  GTTTTCAGCCCCGAGCTTGGTTATGGAGAGCTGTGACA-CAGGGTAATCT  148
      |||||||| |||||||| | | |||||||||||||||| |||||||||||
seq2  GTTTTCAG-CCCGAGCTGGTTAATGGAGAGCTGTGACACCAGGGTAATCT  135

seq1  CAGGGTGCAAATGCTGCTCCTCCATTCTTGTGTCCTGAGGCCTCTGGGC-  197
      ||||||||||||||||||||||||||| ||| ||||||||||||||||| 
seq2  CAGGGTGCAAATGCTGCTCCTCCATTC-TGTTTCCTGAGGCCTCTGGGCG  184

seq1  GGGTCCCTCTTGGGCTAAGTATTTGAGCAGAAGTGGTGATCTTACCTGTG  247
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCTC-TGGGCTAAGTATTTGAGCAGAAGTGGTGATCTTACCTGTG  233

seq1  TTCTCAGGTTTTGTCAGCAATCTTGGGAGACCAGCTCTGTCCCTGTGGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGTTTTGTCAGCAATCTTGGGAGACCAGCTCTGTCCCTGTGGGA  283

seq1  TTTGGGTATAGAGGGCTGTGTGACAGTGTCAGCTCCAGCTGCAGATCTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTATAGAGGGCTGTGTGACAGTGTCAGCTCCAGCTGCAGATCTCT  333

seq1  AATTTTTGTATGTTGTCTCTCTGTGTCTCTGGATTTTGCTATTGCCTTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGTATGTTGTCTCTCTGTGTCTCTGGATTTTGCTATTGCCTTCA  383

seq1  TTGCTTTTACATGCCATAACTGCTAATAATTTAGAATGGAGGATAAATTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTACATGCCATAACTGCTAATAATTTAGAATGGAGGATAAATTA  433

seq1  CATACTTTATTTCTCATATGACTCCAAATCATTGAACCTTTTAAAGGAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTATTTCTCATATGACTCCAAATCATTGAACCTTTTAAAGGAAA  483

seq1  GGAATGTTAAAGTATTTAAATTCTATGTAAAATTTGCTTCATCTAAAACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTAAAGTATTTAAATTCTATGTAAAATTTGCTTCATCTAAAACT  533

seq1  AGTAGCTTAAAATGCTACTTTTATTAGGACACAGTGAGACTTTCTCAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTTAAAATGCTACTTTTATTAGGACACAGTGAGACTTTCTCAAAA  583

seq1  AAAAAAAAAAAGAAAAGAAAAGAAAAAAGGAAAAGAAAAGAAAAAGAAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGAAAAGAAAAGAAAAAAGGAAAAGAAAAGAAAAAGAAAC  633

seq1  AGTAACATTCACACAAAAGTCTTTTAATTAACTTTATTCTCTATCTGTAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACATTCACACAAAAGTCTTTTAATTAACTTTATTCTCTATCTGTAG  683

seq1  TTACGCAGAATTTATAAAGTGAGAATTAGCATTGAGTAATTTAATGTCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCAGAATTTATAAAGTGAGAATTAGCATTGAGTAATTTAATGTCAC  733

seq1  TGTGAAAGTTCTGGGGCAAATACATTTCATACAGTGTGAGGAAAGAAATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGTTCTGGGGCAAATACATTTCATACAGTGTGAGGAAAGAAATG  783

seq1  ATTGCATGTCATGAAGCAGTGGGAATTAGCAGAGATGGCGCTGCTGAGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATGTCATGAAGCAGTGGGAATTAGCAGAGATGGCGCTGCTGAGTG  833

seq1  TAAAGCTGGAACAAGAAAAGTATTAGAATGTCTGAGAATGATTAACAAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGGAACAAGAAAAGTATTAGAATGTCTGAGAATGATTAACAAGT  883

seq1  TTTATTCTGCTCCTACTTTTCCAAAGCATTGATGGGTAGGGGTGTTAGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGCTCCTACTTTTCCAAAGCATTGATGGGTAGGGGTGTTAGAA  933

seq1  CTAGATGAGCTGAAGTTGAGCATCCTTCCCAAAGCCGAGTGAACTCACAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGAGCTGAAGTTGAGCATCCTTCCCAAAGCCGAGTGAACTCACAG  983

seq1  AGGCTGTCTCCTTAGCCAGGGACATCATTTCCTAAAGCACTCAAGGTTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTCTCCTTAGCCAGGGACATCATTTCCTAAAGCACTCAAGGTTGG  1033

seq1  ACCAGAGCTGTTAGTGACTCATGCTAAGTCACAACCGTCTTCTCGTTTAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGCTGTTAGTGACTCATGCTAAGTCACAACCGTCTTCTCGTTTAT  1083

seq1  GTGCAGAATTC  1108
      |||||||||||
seq2  GTGCAGAATTC  1094