BAC Information

Click to search

BAC

Clone NameB6Ng01-114M18
Chromosome1 (Build37)
Map Location 28,531,816 - 28,532,647
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040952, EG433281
Downstream geneEG665903, Gm597, LOC435614, EG623924
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114M18.bB6Ng01-114M18.g
ACCDH920226DH920227
length9791,220
definitionDH920226|Mus musculus domesticus DNA, BAC clone: B6Ng01-114M18, 5' end.DH920227|Mus musculus domesticus DNA, BAC clone: B6Ng01-114M18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggctgaagagttcccatgggaatccccaaactacctaaactc
ttgccaaaactgtaggtctctctccagaaagagaagacaaagttccattt
ctgatgacaacaccttcagttctcattgaactcagaaactaagctgtgcc
acatagaatcttcacctttatgttctggtgactttctttctttctttctt
tctttcttccttcctttctttctttctttctttctttctttctttctttc
tttctttctttctttctttctttcttctttctctctctctctttctttct
ttctttctttctttctttctttcttctttctctctctctttctttctttc
tttctttctttctttctttctttttcttcaactaggtgaagcttcatttt
tataaacccaaataaaaatccaggaacatctagtgcctttcttaaaatct
ggtacttaaaatggtacccaaagagaaatgcaaacaccaactaagcctca
aatccttctgtttacagtggtgcaatgcctacaagatatgctagtgcaat
ggtaacacatgccttgtgtgactaaccaacttatatcaaattttatttaa
gatccaactatacaagaaagaatgtatatcagacactacttggaggacca
agaacatgagaaaaaactagaaatgttatgaacgtattatgctcaaaata
aatgtttaaatactcatacattgtaaatggctaagtcaaataataaccat
gatgagctgatgtatactgagctaattaattagcttattatcattattgg
cttaatttagttattatacacagtctctatcaccagtactgttttgtcat
agtacagtgccatctatacctacacttctctcattctcagagatatcaga
tagaagagctcaggatgatgacagcataagtataactatgctagaatatc
attccttactgcagtagctgatctcatca
gaattccctaaactctacctaatgtttgactgtgggtctttgtaatctgt
ttccatcagttgcaggagggaactaatgtctctgatgacaattggactca
gcatcaatttatgagaataaaaaaattaatattaggcattatttagttaa
catattttgctagttgtcttttgttctgtcctaggtctctgggctatcca
acctctggtcctaaccctccaggcaatatcaggggtaggttcgctctcat
ggtataattcttaagctgggatggtctttgactagccactcctaaaatct
ctgcatcaccttcatcccagcacaacttgtaggcaggacaaattgtaggt
caactttttttctggctgggtttatgtcccaatgctttcactggttgtct
tgctttatatggatttgcttgttcaggatctatattttccatgtccagaa
atcttagccagcctcacagattccaaggagtttacgttgcatttttcctg
tagcttatccctgagatgccccacaatttcagttagatcatttcctgcca
tctgctttccttgggtacacttgcttatttttgttgtagaaatttgaagt
gtgctgttaagttgataggatgtgatctgtccaattatttatgtaggcac
tcactgctatgagctttcctcttagcactgctttgtggtccattagtttg
ggtatgttgtgtattcagtttcaatgaattctacaaagttttaaatttct
atcttgacccaggattctctcagtatatatacatatatatattttcagtt
ttcctgttatttgttgaaatccagctttattccatggtggcatgagagta
tgcaaggattacttcatttttttggatttactaagatttcctttgtgact
aagtatgtggttagtcctgaaaaaggtcccatgaagtgtcgagaggaggt
atatcgttttaaaaaaatttttatgctagtcattttatggatatttattt
tttacatccaaatgttatccctttcctcattcccctccaagaaccccttt
atcatcccctccctcctgccttcatgaggttaggccccaatgcctctctc
acaccagaattccccttcccaccgtaactggaccctagcctctccagaca
aagcctccctctccatgatcctagtccactccttataacaccaatatgtg
agcgcgttggagcttggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_28531816_28532647
seq2: B6Ng01-114M18.b_233_1022

seq1  CTTTCTTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCT  50

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCTCTCTC  100

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCTCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTCTCTCTCT  150

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTCAACTAGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTCAACTAGGTGA  200

seq1  AGCTTCATTTTTATAAACCCAAATAAAAATCCAGGAACATCTAGTGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCATTTTTATAAACCCAAATAAAAATCCAGGAACATCTAGTGCCTT  250

seq1  TCTTAAAATCTGGTACTTAAAATGGTACCCAAAGAGAAATGCAAACACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATCTGGTACTTAAAATGGTACCCAAAGAGAAATGCAAACACCA  300

seq1  ACTAAGCCTCAAATCCTTCTGTTTACAGTGGTGCAATGCCTACAAGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCCTCAAATCCTTCTGTTTACAGTGGTGCAATGCCTACAAGATAT  350

seq1  GCTAGTGCAATGGTAACACATGCCTTGTGTGACTAACCAACTTATATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGCAATGGTAACACATGCCTTGTGTGACTAACCAACTTATATCAA  400

seq1  ATTTTATTTAAGATCCAACTATACAAGAAAGAATGTATATCAGACACTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTAAGATCCAACTATACAAGAAAGAATGTATATCAGACACTAC  450

seq1  TTGGAGGACCAAGAACATGAGAAAAAACTAGAAATGTTATGAACGTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGACCAAGAACATGAGAAAAAACTAGAAATGTTATGAACGTATTA  500

seq1  TGCTCAAAATAAATGTTTAAATACTCATACATTGTAAAATGGCTAAGTCA  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  TGCTCAAAATAAATGTTTAAATACTCATACATTGT-AAATGGCTAAGTC-  548

seq1  AAATAATAACCATGATGAGCTGATGTATACTGAGCTAATTAATTAGCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAACCATGATGAGCTGATGTATACTGAGCTAATTAATTAGCTTA  598

seq1  TTATCATTATTTGGCTTAATTTAGTTATTATACACAGTCTCTATCACCAA  650
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  TTATCATTA-TTGGCTTAATTTAGTTATTATACACAGTCTCTATCACCA-  646

seq1  GGAACCTGTTTTGTCATAGTTACAGTGCCCATTCTATACCCTAACCACTT  700
       | | |||||||||||||| |||||||||   |||||| ||||  |||||
seq2  -GTA-CTGTTTTGTCATAG-TACAGTGCC--ATCTATA-CCTA--CACTT  688

seq1  CTCTCCAATTTCTCAGAGATTATCCAGATAGGAAGGAGCTCAAGGATGAA  750
      |||||    |||||||||| ||| |||||||  | |||||| ||||||| 
seq2  CTCTC---ATTCTCAGAGA-TAT-CAGATAG--AAGAGCTC-AGGATGA-  729

seq1  TGGACAGCCATAAGTAATTAAAAACTATGGCCTAGAAATAATTCAATTCC  800
        ||||| |||||||     | |||||||  |||| ||||  || |||||
seq2  -TGACAG-CATAAGT-----ATAACTATG--CTAG-AATA--TC-ATTCC  766

seq1  TTATAACATAGCAGAGTAGCTGGATCTCATCA  832
      |||   |       ||||||| ||||||||||
seq2  TTACTGC-------AGTAGCT-GATCTCATCA  790