MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-115B15
Chromosome	1 (Build37)
Map Location	116,658,525 - 116,659,696
singlet/doublet	singlet
Overlap gene	none
Upstream gene	none
Downstream gene	LOC227506, Cntnap5a
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC227506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:227506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Cntnap5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:636808 MGI:3643623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cntnap5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116734826 GeneID:636808 MGI:3643623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 5A transcript_id : NM_001077425.1

name	Cntnap5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116734827 GeneID:636808 MGI:3643623
definition	GO_function : GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : contactin associated protein-like 5-1 product : contactin associated protein-like 5A protein_id : NP_001070893.1

name	LOC227506 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:227506
definition	number : 4 pseudo : _no_value

name	LOC227506 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:227506
definition	number : 3 pseudo : _no_value

name	LOC227506 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:227506
definition	number : 2 pseudo : _no_value

name	LOC227506 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:227506
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128810
definition	standard_name : D1Mit441

name	(CDS detail)
type	STS
link
xref	UniSTS:116563
definition	standard_name : RH83563

name	(CDS detail)
type	STS
link
xref	UniSTS:116256
definition	standard_name : D1Mit87

name	(CDS detail)
type	STS
link
xref	UniSTS:123255
definition	standard_name : 15.MMHAP25FLE3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:122816
definition	standard_name : 05.MMHAP51FRB8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:225351
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:223007
definition	standard_name : RH141007

name	(CDS detail)
type	STS
link
xref	UniSTS:142246
definition	standard_name : D1Mit469

name	(CDS detail)
type	STS
link
xref	UniSTS:128748
definition	standard_name : D1Mit387

name	(CDS detail)
type	STS
link
xref	UniSTS:128638
definition	standard_name : D1Mit285

clone name	MSMg01-444G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-455N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-115B15.b	B6Ng01-115B15.g
ACC	DH920452	DH920453
length	1,194	1,163
definition	DH920452\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B15, 5' end.	DH920453\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B15, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcactggtcttaccacattccccatcatcctgaagcagctggtctg atagaaagatggaatggccttttgaagacgcagttacaacgccaattagg tggtaacagcttggaaggctggggtagagttcttcagaaggcagtatatg ctttgaatcagcgctcgatatatggtacagtttcacctatagccaggatt catgggtccaggaatcaaggggtggaaaacggaatagttccacttactat cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc taggttctgctggcctagaagttttggctccagagaggggaatgctccta ccaggagctacaacaaacattccattgaactggaagctcagacttccccc tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaaggaa taacagtgttaggaggggtgatagatccagattaccatggggaaattgga ttacctcttcacaatggtggtaagcaagattatgtctggagtgtaggaga tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg ggaaactacaacagcctaatccaagcaggatgacaaaggacgcagaccca tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc tgaggtgctggctgaaggagaaggaaatacagaatgggtagtagaggaag gtagttataaataccaattaaggccacgtaaccagttgcagaaacgagga ttataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgat tgtacgagggatagttatatcatgttaggcgtatttacaaccttgttatt gtttcatgtgaacatgagatattatttgtgtcaagttgacaaggggtgga ttgtagtggctattcctggttgtcaacttgacaatattggaatgaattac aatccggaattggaggctcaccagtgacccttatctggaagctgagatct atctgatctgtttgaagatctgagccacagtgctatgattcagaagaatg atcttccgagtagacacaacctttaatctgggcttacgctttcatgataa ggtggtggacaccctgtagattgactacgtactctgcttgtact	gaattcagaaaagggtgaaagaaactgagtaagagggtgaacacattgga agaccagcagtcccaactaacctgaacctccaagatctctcagaaactga gccatcaaccaggcagcatacaatagctgataggaggcacttggcacata aacagcagaagactgcctgataggcctcagtgagagaagatgtacttaac ccttgagagacttgaggctctaggatatgggggagcttgttggggtttgg ggagggcaatctcttggaaacatggaagtaggaattggaataagatgtgt cagagggtggactagcatgaggatgaagactgggctgtaaaaatagatta atgataattttaaaaagaatgggtagtacttgtgtaatattagcttttct tcacgtctccacatatgaacacatgtatgcatctgtacatataaacaaaa tatccacatacataaaacattatatttttgtgtctgacttctttcttggt aacttcaagttgtatgtggtgaaagcccttttccttgtttgatgttgttt attttcagttcattaatttttttatttatggggtcactggaatgattaaa acaagtttttgcaataaggtttatgtcaagggagcaagtcccatacagac tctaacagaacatttaaatggtagggcaaatataaagaacttcccattct gaggatagataaacatactaataatgtgatagctattaaaatcaactcaa atcaatttgcaaattcatctagaataacaaaaaacctaggatagcaaaaa ctctttctcaaggataaaagaacctctggtgggaatcaccatgcctgacc taaagcttactacagagcaattgtgataaaaactgcatgggtactggtat agagacagacaagtagaccaatggaataaaattgagacccagaaatgaac cctcacacctatggtcactgatcttcaacagggagctaaaaccatccagt ggaagaaagacagctttttcaaattgtgctgggacacctggttgttattc gtgtagagaatgcgattgatccaatatatctcctttgtcctagtggtcta gatctagtgattaaggaccttcataaaaccgaggaccctgaaacttttag agaaaatggggaa
quality values	Open. Hide. 61 42 28 43 61 32 31 61 61 50 61 50 53 55 61 55 61 38 38 61 61 61 55 55 55 28 21 15 23 32 11 27 22 22 22 36 59 61 59 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 59 59 59 36 37 35 35 61 59 59 61 59 61 61 61 59 61 59 59 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 52 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 55 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 52 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 50 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 61 53 50 50 50 52 61 61 61 61 61 61 61 61 53 61 53 61 61 61 34 50 50 50 47 50 61 61 47 61 61 61 61 61 61 61 53 61 39 38 42 43 61 61 61 33 52 52 61 61 61 61 47 61 53 61 47 50 50 47 28 50 53 50 38 42 47 52 52 53 53 45 53 38 53 53 53 53 47 57 53 43 53 47 42 39 50 53 50 57 53 50 50 53 50 30 47 26 42 52 38 52 45 50 27 57 57 57 53 53 50 57 31 46 45 38 53 57 57 57 50 47 53 38 45 50 45 45 40 37 24 28 53 57 57 57 53 34 47 22 43 43 19 50 40 53 22 43 47 47 46 47 46 40 21 34 38 52 38 53 46 47 37 53 53 46 52 27 57 52 34 52 41 23 57 52 41 26 39 42 53 41 31 57 44 42 47 57 53 43 53 37 45 50 27 53 38 50 42 15 7 34 21 38 42 40 43 42 43 29 57 53 39 36 53 34 30 40 43 52 40 40 27 53 28 39 23 47 21 33 36 34 37 39 28 38 27 40 37 40 31 27 57 53 25 29 20 53 25 53 33 29 40 37 32 43 57 40 36 37 41 47 33 37 33 41 48 22 17 25 12 57 27 16 38 27 41 16 57 57 23 20 57 35 27 37 33 29 41 33 38 23 38 48 51 44 29 29 12 36 27 20 41 20 28 34 6 46 15 46 20 30 32 30 26 30 30 27 29 31 37 33 28 30 41 29 29 39 48 39 21 29 33 33 27 29 12 10 29 16 18 12 10 14 22 34 18 23 18 10 30 36 28 51 25 23 16 28 29 29 28 27 26 21 14 29 30 43 22 38 17 18 17 43 29 29 51 33 21 23 29 28 29 23 23 29 34 27 28 21 17 7 29 25 46 46 33 10 29 32 12 12 29 25 14 34 19 31 34 28 10 11 12 17 28 20 23 23 33 30 19 21 33 23 31 25 20 33 27 27 33 23 17 19 24 11 26 29 24 8 25 21 34 27 35 20 20 19 28 19 22 15 21 17 19 19 7 12 19 30 14 19 13 11 12 5 7 6 18 9 19 23 30 19 12 6 28 25 11 34 21 20 28 31 27 27 15 33 17 14 9 35 18 30 5 4 3 16 16 24 12 4 6 14 8 19 4 18 9 29 31 6 42 21 17 22 14 14 19 12 6 30 14 5 3 6 4 7 13 10 4 5 22 10 17 26 16 6 31 10 8 26 8 7 25 9 6 9 14 12 13 20 11 8 6 6 5 24 5 8 3 4 4 4 4 3 5 5 8 11 14 17 7 29 10 8 10 6 12 4 18 26 19 7 9 4 4 6 4 16 3 22 11 5 3 2 4 2 3 1 5 4 3 5 3 10 3 6 8 16 4 5 3 1 20 4 9 14 6 13 6 5 2 4 1 2 4 4 9 6 5 3 7 20 4 8 3 4 4 3 3 3 13 10 4	Open. Hide. 61 47 55 61 55 21 11 12 20 18 13 16 18 28 14 24 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 59 55 37 35 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 59 61 59 61 61 61 59 59 59 61 61 59 59 61 59 59 61 61 61 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 59 59 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 52 55 52 55 52 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 47 43 61 61 61 61 61 61 61 61 61 61 47 61 61 61 53 61 61 61 61 61 61 50 53 50 47 53 61 61 61 37 43 61 42 61 61 50 53 53 53 61 43 50 61 53 61 61 50 50 46 50 32 45 53 50 53 47 61 38 61 61 47 35 61 53 53 50 50 53 61 53 47 33 53 47 42 47 47 43 31 25 33 53 43 47 36 34 53 47 52 45 45 45 45 43 23 34 53 47 52 45 31 53 36 53 53 42 47 57 29 13 38 47 53 34 45 47 24 47 42 39 53 43 35 35 34 52 50 40 52 50 36 32 47 28 39 37 43 45 50 52 21 57 36 39 45 30 52 38 24 53 47 38 28 50 50 45 45 50 53 53 28 50 47 57 27 57 41 25 52 24 47 47 41 31 8 19 57 57 12 19 23 9 47 45 52 38 21 50 52 42 39 45 36 52 38 28 35 18 12 42 21 23 20 11 17 28 42 41 38 22 53 53 38 26 36 36 12 53 32 38 38 34 31 37 38 30 30 43 39 33 39 30 37 47 52 46 26 17 21 17 27 27 53 18 19 35 29 14 25 13 20 27 21 18 46 53 52 23 39 20 13 23 15 9 19 23 22 12 14 33 14 19 53 23 28 17 28 20 8 13 25 28 19 26 37 40 12 33 37 32 53 35 24 22 37 37 13 28 29 15 23 14 25 44 19 21 8 18 29 28 40 27 24 27 17 24 44 29 30 16 19 19 22 32 28 15 8 29 27 11 23 29 19 38 19 30 16 33 32 20 21 23 12 18 16 23 31 29 30 28 9 14 24 25 31 23 39 24 14 10 29 34 29 30 12 8 11 39 12 29 28 12 19 9 19 14 23 35 10 5 25 41 28 33 11 9 17 26 31 25 5 15 9 15 9 22 26 29 21 28 30 23 11 18 10 11 37 12 9 14 28 27 28 15 8 6 13 23 12 27 10 16 9 11 11 12 43 30 7 7 25 6 30 20 23 23 9 7 11 13 19 25 12 14 36 15 6 23 15 12 21 17 13 30 31 46 29 23 13 10 12 13 6 7 7 12 22 20 14 17 26 26 11 13 11 12 9 20 14 26 21 12 8 14 10 16 8 11 5 12 10 11 5 5 10 5 19 28 19 8 7 6 7 5 11 28 12 6 8 29 13 7 6 6 4 4 8 7 10 5 10 6 7 7 5 5 9 8 14 9 6 5 11 15 11 13 5 27 11 14 24 13 11 20 10 4 13 7 7 7 6 5 8 21 21 8 9 29 8 26 9 12 5 6 19 13 9 20 7 6 6 4 8 10 20 6 23 6 10 30 8 14 20 6 8 3 3 6 4 9 11 20 17 4 10 12 10 7 4 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_116658525_116659696
seq2: B6Ng01-115B15.g_68_1230 (reverse)

seq1  TTCCCCATTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAG  50
      |||||||||||   ||||| ||||||||| |||   |||||||  |||||
seq2  TTCCCCATTTT---CTCTAAAAGTTTCAGGGTCCTCGGTTTTA--TGAAG  45

seq1  TTCCTTGATCCACTTAGAT-TTGACC-TTAGTAC-AAGGAGATAGTATGG  97
       ||||| || ||| ||||| | ||||  ||| || |||||||||   |||
seq2  GTCCTTAAT-CAC-TAGATCTAGACCACTAGGACAAAGGAGATATATTGG  93

seq1  ATCAATTCGCATTCTTCTACACG-ATAACAACCAGTTGTCCCAGCACCAA  146
      ||||| |||||||| |||||||| ||||||||||| ||||||||||| | 
seq2  ATCAA-TCGCATTC-TCTACACGAATAACAACCAGGTGTCCCAGCACAA-  140

seq1  TTTTTGAAAAAGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTC  196
        ||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  --TTTGAAAAAGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCC-TGTT  187

seq1  GAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTC  246
      ||||||| |||||||||||||||| ||||||||||||||||| |||||| 
seq2  GAAGATC-AGTGACCATAGGTGTGAGGGTTCATTTCTGGGTC-TCAATTT  235

seq1  TATTCCATTGGTCTACTTGTCTGTCTCTATACCAGTA-CCATGCAGTTTT  295
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATTCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCCATGCAGTTTT  285

seq1  TATCACAATTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATT-CCA  344
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  TATCACAATTGCTCTGTAGT-AAGCTTTAGGTCAGGCATGGTGATTCCCA  334

seq1  CCAGAGGTTCTTTTATCCTTGAG-AAGAGTTTTTGCTATCCTAGGTTTTT  393
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCAGAGGTTCTTTTATCCTTGAGAAAGAGTTTTTGCTATCCTAGGTTTTT  384

seq1  TGTTATTCTAGATGAATTTGCAAATTGATTTGAGTTGATTTTAATAGCTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTCTAGATGAATTTGCAAATTGATTTGAGTTGATTTTAATAGCTA  434

seq1  TCACATTATTAGTATGTTTATCTATCCTCAGAATGGGAAGTTCTTTATAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTATTAGTATGTTTATCTATCCTCAGAATGGGAAGTTCTTTATAT  484

seq1  TTGCCCTACCATTTAAATGTTCTGTTAGAGTCTGTATGGGACTTGCTCCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTACCATTTAAATGTTCTGTTAGAGTCTGTATGGGACTTGCTCCC  534

seq1  TTGACATAAACCTTATTGCAAAAACTTGTTTTAATCATTCCAGTGACCCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATAAACCTTATTGCAAAAACTTGTTTTAATCATTCCAGTGACCCC  584

seq1  ATAAATAAAAAAATTAATGAACTGAAAATAAACAACATCAAACAAGGAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAAAAATTAATGAACTGAAAATAAACAACATCAAACAAGGAAA  634

seq1  AGGGCTTTCACCACATACAACTTGAAGTTACCAAGAAAGAAGTCAGACAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTTCACCACATACAACTTGAAGTTACCAAGAAAGAAGTCAGACAC  684

seq1  AAAAATATAATGTTTTATGTATGTGGATATTTTGTTTATATGTACAGATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAATGTTTTATGTATGTGGATATTTTGTTTATATGTACAGATG  734

seq1  CATACATGTGTTCATATGTGGAGACGTGAAGAAAAGCTAATATTACACAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGTGTTCATATGTGGAGACGTGAAGAAAAGCTAATATTACACAA  784

seq1  GTACTACCCATTCTTTTTAAAATTATCATTAATCTATTTTTACAGCCCAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACCCATTCTTTTTAAAATTATCATTAATCTATTTTTACAGCCCAG  834

seq1  TCTTCATCCTCATGCTAGTCCACCCTCTGACACATCTTATTCCAATTCCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATCCTCATGCTAGTCCACCCTCTGACACATCTTATTCCAATTCCT  884

seq1  ACTTCCATGTTTCCAAGAGATTGCCCTCCCCAAACCCCAACAAGCTCCCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCATGTTTCCAAGAGATTGCCCTCCCCAAACCCCAACAAGCTCCCC  934

seq1  CATATCCTAGAGCCTCAAGTCTCTCAAGGGTTAAGTACATCTTCTCTCAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCTAGAGCCTCAAGTCTCTCAAGGGTTAAGTACATCTTCTCTCAC  984

seq1  TGAGGCCTATCAGGCAGTCTTCTGCTGTTTATGTGCCAAGTGCCTCCTAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCTATCAGGCAGTCTTCTGCTGTTTATGTGCCAAGTGCCTCCTAT  1034

seq1  CAGCTATTGTATGCTGCCTGGTTGATGGCTCAGTTTCTGAGAGATCTTGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATTGTATGCTGCCTGGTTGATGGCTCAGTTTCTGAGAGATCTTGG  1084

seq1  AGGTTCAGGTTAGTTGGGACTGCTGGTCTTCCAATGTGTTCACCCTCTTA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGGTTAGTTGGGACTGCTGGTCTTCCAATGTGTTCACCCTCTTA  1134

seq1  CTCAGTTTCTTTCACCCTTTTCTGAATTC  1172
      |||||||||||||||||||||||||||||
seq2  CTCAGTTTCTTTCACCCTTTTCTGAATTC  1163

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information