BAC Information

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BAC

Clone NameB6Ng01-115F22
Chromosome1 (Build37)
Map Location 7,490,621 - 7,491,267
singlet/doubletsinglet
Overlap genenone
Upstream geneSt18, LOC665015, LOC665027, LOC100039347, LOC435608, Pcmtd1, LOC545302
Downstream geneLOC665063, LOC665069, LOC100039408, Sntg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115F22.bB6Ng01-115F22.g
ACCDH920653DH920654
length1,164986
definitionDH920653|Mus musculus domesticus DNA, BAC clone: B6Ng01-115F22, 5' end.DH920654|Mus musculus domesticus DNA, BAC clone: B6Ng01-115F22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
aaaaattggacatagtactaaaggaggatccagcaatatctctcctgggc
atatacccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaagagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctaataaaaggaatgaattaatgaaattcctagacaa
atggttagacctggagggcttcatcctgagtgaggtaacacaatcacaaa
agaattcaaacgatatgtactcactgataagtggatattagcccagaaat
ttagtatactcgagatataagatacaattttcaaaacacatgatactgaa
gaagaatgaagaccaatgtgtggacactttgccccttcttagaattggaa
acaatcacccatggaagaagttacagagacaaagtttggagctgagacaa
aaggatagaccatctagagactgccatatccagggttccatcccataatt
agcctccaaacgatgacaccattgcatacactagcaagattttgcttaaa
ggaccctgatatagctgtctcttgtgagactaggctggcgcctagcaaac
acataagtggatactcacagtcagctattggatggatcacagggcaccca
atggaggagctagagaaagtatccaaggagataaggagatctgcaccctg
taggtgcacacattatgactaacagtaccccagagctctgactatagcta
catattgtatcaagatggctagtggcatcactggaagaaagtcatagaac
cgaactttatatgccagtcaggtaactcaggctaaatgggatggatggct
agggggaagtgggg
gaattcctgtatatttgcatatttttattttctatattcttgtttagtac
attctatctgagatattataactatccatatagttatactaggtatgatt
atataccagtgatattcaagctataatttgattacctatttagtcattga
aaggaaataaaactgtaattcatgtaatgtatgtcaaatagcccaaagag
ttgtttgtgagctttgaaacctggggctgagaacatagcagaacagacca
ggacatgcccgggcaggcccatcgcctccctatctcccacccctctgacc
taagttaaatgttacaggctgctgatgtttaaatggaccaatcatgtgaa
accgcgccaattcctcccccagccccactccttttctataaaaatcccta
gcttccaagcctcgtggtcgaatccactgtctcctgtgtgagatacgttt
caacccggagctccgccattaaaatacctcttgttgttacatcaaggtgt
tgtgttctattcgtgattcttgggtgcacgccgaatcgggagctgagtgg
gggtttccccactgagttctttcatcatcaaattgctctttcacaggatc
acctaatataagaaaacacagatacttatgattcataaaagtatcaatgt
tagttatgaattgaagatttacaggattacaaaactacatatatgagcaa
tgaaaataacctcatgttctcacaacatgagaaactatattaaaatatca
cagcattaggaacagtgagaaccactgttctatattctcagcaaaaaaaa
aaagtttcatcatgaatacaaatttaagtaacaaaagcaaatctacacag
gatgattcaggtataaagttaacaaattttcaaataactttacaaatttg
ctaaaatcttaggatagtctgcctcttcttttctagtctctcctctcctc
atacccatctttgtctcacagatacttaaattcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_7490621_7491267
seq2: B6Ng01-115F22.g_68_714 (reverse)

seq1  TTGATACTTTTATGAATCATAAGTATCTGTGTTTTCTTATATTAGGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACTTTTATGAATCATAAGTATCTGTGTTTTCTTATATTAGGTGAT  50

seq1  CCTGTGAAAGAGCAATTTGATGATGAAAGAACTCAGTGGGGAAACCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAAAGAGCAATTTGATGATGAAAGAACTCAGTGGGGAAACCCCCA  100

seq1  CTCAGCTCCCGATTCGGCGTGCACCCAAGAATCACGAATAGAACACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCCCGATTCGGCGTGCACCCAAGAATCACGAATAGAACACAACA  150

seq1  CCTTGATGTAACAACAAGAGGTATTTTAATGGCGGAGCTCCGGGTTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATGTAACAACAAGAGGTATTTTAATGGCGGAGCTCCGGGTTGAAA  200

seq1  CGTATCTCACACAGGAGACAGTGGATTCGACCACGAGGCTTGGAAGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTCACACAGGAGACAGTGGATTCGACCACGAGGCTTGGAAGCTAG  250

seq1  GGATTTTTATAGAAAAGGAGTGGGGCTGGGGGAGGAATTGGCGCGGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTATAGAAAAGGAGTGGGGCTGGGGGAGGAATTGGCGCGGTTTC  300

seq1  ACATGATTGGTCCATTTAAACATCAGCAGCCTGTAACATTTAACTTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATTGGTCCATTTAAACATCAGCAGCCTGTAACATTTAACTTAGGT  350

seq1  CAGAGGGGTGGGAGATAGGGAGGCGATGGGCCTGCCCGGGCATGTCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGGTGGGAGATAGGGAGGCGATGGGCCTGCCCGGGCATGTCCTGG  400

seq1  TCTGTTCTGCTATGTTCTCAGCCCCAGGTTTCAAAGCTCACAAACAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTGCTATGTTCTCAGCCCCAGGTTTCAAAGCTCACAAACAACTC  450

seq1  TTTGGGCTATTTGACATACATTACATGAATTACAGTTTTATTTCCTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTATTTGACATACATTACATGAATTACAGTTTTATTTCCTTTCA  500

seq1  ATGACTAAATAGGTAATCAAATTATAGCTTGAATATCACTGGTATATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTAAATAGGTAATCAAATTATAGCTTGAATATCACTGGTATATAAT  550

seq1  CATACCTAGTATAACTATATGGATAGTTATAATATCTCAGATAGAATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTAGTATAACTATATGGATAGTTATAATATCTCAGATAGAATGTA  600

seq1  CTAAACAAGAATATAGAAAATAAAAATATGCAAATATACAGGAATTC  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAGAATATAGAAAATAAAAATATGCAAATATACAGGAATTC  647