BAC Information

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BAC

Clone NameB6Ng01-115K12
Chromosome1 (Build37)
Map Location 126,995,031 - 126,996,278
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115K12.bB6Ng01-115K12.g
ACCDH920865DH920866
length1,2421,257
definitionDH920865|Mus musculus domesticus DNA, BAC clone: B6Ng01-115K12, 5' end.DH920866|Mus musculus domesticus DNA, BAC clone: B6Ng01-115K12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccatgatctaatgttaagtgggtgaatctataaatgtaatcat
aaaaaagaagcctgtaatgttgtggtcacttcacaaggaggagcggctgg
agtgaagcaggtagctctttgacagtgattgacattttgatgtcgctctc
caggccattgctgagtatgtgcttctgtaaacagaaagtgtcctctaaga
cagaaaacaggaagatggtttgttccataaagagctccctctgttaacat
ggggacccaagttctttcctcagcacacacatgggatagtgtggtgacat
gtaaagactggcattggatccccagtccttgcttgtcatccggcccagcc
aaattggtgatgtctagcccagtgagagaccttgtcttattttaaaaaga
ttgtgaaggcaatgtggttcatcacgaaaaggtgcctggcaaccaaacct
gagaacctacgtagaaggagagaaccaactcttgcaagctgtcctctggt
ttctatatccatctcctcctcacaaatgagtgaatattgtttttaattaa
aagaataaaagggatatgtcctgaggagtgacaccagatgctgacctctg
gactgatacacacacacacacacacactcacgcactcacgcacacacata
cacaagcacaatcacacacccatctgtataaatcatttttgtgtgaactc
cccctatcatcagatatgactacacacagtttctcccacaataactaatc
ctgtatcagcaatactggtctcttgcttcttgtcatcaaatatatgctta
tggagaataatgtgtgagctctttctggggaggtacaccaacacttattc
attccagataggacaccaaggataatctaaagaaagaaatgtatattgtt
actcacaggagcatcacttgggtgtgtggattggtgggttacctacagga
gtatgagtaaggggttgatacctgtattcaggagcaaaagtgaacattat
ccacatagtatgaatggagggatgctctaacttattttctattggctgga
acaaaacttgtaccaaagcaattttgaggaaaaaaaaggtgtttggctac
ctgaacttgaccacagttgatctttgaagatttgctctgtcggagctcag
gtagggatatgaagagcatgagaacctgtgcttttgcgaccatgattctt
acttatattttcatcagccggctatattcagtctgggcactg
gaattccataatgcatacaacatatttttaattcactacctactccctct
ccaactcttccaaaatcctatccccctcctcctcccaacttcatgtcctc
ttaaacacacacacacacacacacacacacaaacacacacacacaacaca
acaacaagaaggtcttactaagtagctcttgctggcctagaatgcactat
atatatatatcaatatcagtttggcttctaactcatagaaatcagcttac
ctgtgcctttcaggtactgggactaatagtgtgttccactatatttggtt
taaaagcatattttattctttgaaaggtctatatatttattcaatatata
tatatatataaatatatatatattgtattcatccaccacaacctttctcc
aactctccctattgctcctatttctctcacttccaactttgtgtcctttc
tttattttatatttttgttattaataacccaccaagtctaattggtgctg
cccatatgcacaagaatgtgaataatctactgggaccacacccctagaga
aaactaacctggccctccctatcccagcggctgcctactgtcaatactca
aggagcgtattcgctggaaagatatagattgaatctgaaggagagggctt
gagcacaccttttgtggttcctgcccaggaagtcactcgagactttattg
gtgttcattgaaatagatcctggaaggaaaggaaggatcagatgtggaaa
aggattgcctgaagcaataaaactgaagtccagaccaagaaattctcaga
aaacatcgagagaggaagacactgcttcaatcctctatagtgaccagaga
ggctcttctaatcccagggcttggtagatcagagatgaaggatattctat
gaactaacatccttagtaccatgttgggttggtctgtgttccagggatga
cttcattggctattttcatatctaaagacagccagagtaatggccaatac
ctcagctttataatcaaagagtaacagaatgttgtcagcagcatttgaat
cccagcactgaggagtggagacaaaagaatctctgggcttctgtctagca
gctaagtgaattgatacctcgatcataggagccttctgttagacgcacct
ggagacaggcagcgtcttctgcttcaatgtgccagtccaccagtcagcat
ttcgaaagtatctatcgaaagaaacacagtgagtgttcaggttatgcgaa
agaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126995031_126996278
seq2: B6Ng01-115K12.b_45_1286

seq1  GAATTCTCCATGATCTAATGTTAAGTGGGTGAATCTATAAATGTAATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGATCTAATGTTAAGTGGGTGAATCTATAAATGTAATCAT  50

seq1  AAAAAAGAAGCCTGTAATGTTGTGGTCACTTCACAAGGAGGAGCGGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAGCCTGTAATGTTGTGGTCACTTCACAAGGAGGAGCGGCTGG  100

seq1  AGTGAAGCAGGTAGCTCTTTGACAGTGATTGACATTTTGATGTCGCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGCAGGTAGCTCTTTGACAGTGATTGACATTTTGATGTCGCTCTC  150

seq1  CAGGCCATTGCTGAGTATGTGCTTCTGTAAACAGAAAGTGTCCTCTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCATTGCTGAGTATGTGCTTCTGTAAACAGAAAGTGTCCTCTAAGA  200

seq1  CAGAAAACAGGAAGATGGTTTGTTCCATAAAGAGCTCCCTCTGTTAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACAGGAAGATGGTTTGTTCCATAAAGAGCTCCCTCTGTTAACAT  250

seq1  GGGGACCCAAGTTCTTTCCTCAGCACACACATGGGATAGTGTGGTGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCCAAGTTCTTTCCTCAGCACACACATGGGATAGTGTGGTGACAT  300

seq1  GTAAAGACTGGCATTGGATCCCCAGTCCTTGCTTGTCATCCGGCCCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGACTGGCATTGGATCCCCAGTCCTTGCTTGTCATCCGGCCCAGCC  350

seq1  AAATTGGTGATGTCTAGCCCAGTGAGAGACCTTGTCTTATTTTAAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGTGATGTCTAGCCCAGTGAGAGACCTTGTCTTATTTTAAAAAGA  400

seq1  TTGTGAAGGCAATGTGGTTCATCACGAAAAGGTGCCTGGCAACCAAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAGGCAATGTGGTTCATCACGAAAAGGTGCCTGGCAACCAAACCT  450

seq1  GAGAACCTACGTAGAAGGAGAGAACCAACTCTTGCAAGCTGTCCTCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCTACGTAGAAGGAGAGAACCAACTCTTGCAAGCTGTCCTCTGGT  500

seq1  TTCTATATCCATCTCCTCCTCACAAATGAGTGAATATTGTTTTTAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATCCATCTCCTCCTCACAAATGAGTGAATATTGTTTTTAATTAA  550

seq1  AAGAATAAAAGGGATATGTCCTGAGGAGTGACACCAGATGCTGACCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAAAGGGATATGTCCTGAGGAGTGACACCAGATGCTGACCTCTG  600

seq1  GACTGATACACACACACACACACACACTCACGCACTCACGCACACACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATACACACACACACACACACACTCACGCACTCACGCACACACATA  650

seq1  CACAAGCACAATCACACACCCATCTGTATAAATCATTTTTGTGTGAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCACAATCACACACCCATCTGTATAAATCATTTTTGTGTGAACTC  700

seq1  CCCCTATCATCAGATATGACTACACACAGTTTCTCCCACAATAACTAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATCATCAGATATGACTACACACAGTTTCTCCCACAATAACTAATC  750

seq1  CTGTATCAGCAATACTGGTCTCTTGCTTCTTGTCATCAAATATATGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCAGCAATACTGGTCTCTTGCTTCTTGTCATCAAATATATGCTTA  800

seq1  TGGAGAATAATGTGTGAGCTCTTTCTGGGGAGGTACACCAACACTTATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATAATGTGTGAGCTCTTTCTGGGGAGGTACACCAACACTTATTC  850

seq1  ATTCCAGATAGGACACCAAGGATAAACCAAAGAAAGAAATGTATATTGTT  900
      ||||||||||||||||||||||||| | ||||||||||||||||||||||
seq2  ATTCCAGATAGGACACCAAGGATAATCTAAAGAAAGAAATGTATATTGTT  900

seq1  ACTCACAGGAGCATCACTTGGGTGTGTGGA-TGGTGGGTTACCTACAGGA  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACTCACAGGAGCATCACTTGGGTGTGTGGATTGGTGGGTTACCTACAGGA  950

seq1  GTATGAGTAGGGTGTTGATACCTGTATTCAGGAGCAAAAGTGAAACATTA  999
      ||||||||| || ||||||||||||||||||||||||||||| |||||||
seq2  GTATGAGTAAGGGGTTGATACCTGTATTCAGGAGCAAAAGTG-AACATTA  999

seq1  TCCACAATAGTATGAAT-GAGGGATGC-CTCAACTATTTTCTATT-GCTG  1046
      ||||| ||||||||||| ||||||||| || |  ||||||||||| ||||
seq2  TCCAC-ATAGTATGAATGGAGGGATGCTCTAACTTATTTTCTATTGGCTG  1048

seq1  TGACAAACACTGTAACCAAAAGCAA-TTTGAGGAAGAAAAAGTGTGTTTG  1095
        |||||   ||||  | ||||||| ||||||||| |||||| |||||||
seq2  GAACAAAACTTGTA--CCAAAGCAATTTTGAGGAAAAAAAAG-GTGTTTG  1095

seq1  GCTAACCTG-ACCTGACCACAGTTGATCATTGAAGAATGTCATGGCAGGA  1144
      ||| ||||| || ||||||||||||||| ||||||| |  |   |  |||
seq2  GCT-ACCTGAACTTGACCACAGTTGATCTTTGAAGATTTGCTCTGTCGGA  1144

seq1  GCTCAGGGAAGGAAATGAAGAGCCATGGAAGAACACTG-CTTTTTGCCAC  1193
      ||||||| | ||| |||||||| ||||  ||||| |||   |||||| ||
seq2  GCTCAGGTAGGGATATGAAGAG-CATG--AGAAC-CTGTGCTTTTGCGAC  1190

seq1  CATGGT--TTCCTTAGCCTATTTTCATCACAGCCGGCTATTTCACAGCCT  1241
      |||| |  || ||||   |||||||||  ||||||||||| |  ||| ||
seq2  CATGATTCTTACTTA---TATTTTCAT--CAGCCGGCTATAT-TCAGTCT  1234

seq1  -GGCACTG  1248
       |||||||
seq2  GGGCACTG  1242