BAC Information

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BAC

Clone NameB6Ng01-115M12
Chromosome1 (Build37)
Map Location 111,551,388 - 111,551,916
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626474
Downstream geneEG666508, Cdh7, LOC100041429, EG626652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115M12.bB6Ng01-115M12.g
ACCDH920956DH920957
length1,0781,003
definitionDH920956|Mus musculus domesticus DNA, BAC clone: B6Ng01-115M12, 5' end.DH920957|Mus musculus domesticus DNA, BAC clone: B6Ng01-115M12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacttaaacatgataaaagcaacctacagcaaacca
gtagccaacatcaaagcaaatggtgagaggcttgaagcaattccactaaa
atcagggactaggcaaggctgcccactttctccctacctattcaacatag
tacttgaagtcctagccagagcaacaacaaaaggagatcaaggggataaa
gattggaaaagaggaagtcaaaatatcactttttgcagatgatatgatag
tatatataagtgaccctaaaaattccaccagagaactcctaaacctgata
aacaccttcagtgaagtagctggatataaaattaactcaaacaagtcaat
tgcctttctctacacaaagaataaacaggctgagaaagaaattagggaaa
caacacccttccaaatagtcacaaataacataaaatatcttggtgtgact
ctaactaaggaagtgaaagatctgtatgataaaacgtcaagtctctgaat
tccaattcaattcttcaacgaattagaaagagcaatttgcaaattcatct
ggaataacaaaaaacctaggatagcaaaaactcttctcaaggataaaagt
acctctggtggaatcaccatgccttacctaaagatttactagagagcaat
tgtgataaaaactgcatggttcctttgtgattgggttacttcactcagga
tgataccctccaggtccatccatttgcctaggaatgtcataaattcattt
tttttaatagctgagtagtattccattgtgtaaatgtaccacattttctg
tatccattcctctgttgaggggcatctgggttctttccagcttctggcta
tttataacaaggctgcaatgaacataagtagagcatgtgtttcttcttac
cagttgggacatcttctggatatatgcccaggagaggtattgcgggaatc
cttctggtagtattatgtccaatttttctgaggaactgccagactgattt
ccagattgttgtatagctgcaatctaccgacaatggagagtgttcccctt
ttctcacatcctcgcagcatctgctgtc
gaattccatgccacaaagatgaagacgccaaaagaagacaacagaaaaca
aggggaaaacgtacaccttttcatcaaagacaaactcataaatggcacct
agaactataatcaccacgaagctaaatgactacacaacagcataagaaca
caattgataataacaagagcaactttccccaccagaacctaactatccta
ctagagcaagccctgaaaattccaacacagctgaagcaaaagaaaaaaaa
atgcctaccttatgaagatgatagaaatccttttgaggaaatgaataaat
ctcctaatgaaatgataaaaatatcaataaaattggaagaaattaacaaa
aacttaaataaagaaaataaagaaaggaagaaagaaagagagaaagaaag
acagaaagaaagagacagaaagagagagagagagagagagagagagagag
agagagagagaaagggagaaagaatgggagaaagaagggaaggaagaagt
gatcaaaggaacagaaaataatggttccagacctgaaaataaaatggaaa
cgataggaaaacaaaaacttgggaaattttttaaaatacaaaatctaggt
aaaaaaataataaaaactacagactcaagcaccaccaacaaaatacaaga
cactaaagaaagagcttcagccattaacgataaaagagatcaaagaaaaa
attctaaatctaaaaatttctgaaataaaacatcagtaaatctaatacat
tatgaagagacaaacataagtataacaggaatgaatagaaggagaggaat
cccttgtgaaaggccaagaaaatattttcaacaaaatcataaaataaaaa
tttcctaaccttaagagagagatgactataatgatacaagaagtatacag
agcaccaaatagattgaactagaaaagaaaagaccataacaaataataag
caaattataagcaatataacaaagagactattaaaagctgcaaagaaaaa
act
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111551388_111551916
seq2: B6Ng01-115M12.g_69_597

seq1  GAATTCCATGCCACAAAGATGAAGACGCCAAAAGAAGACAACAGAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCACAAAGATGAAGACGCCAAAAGAAGACAACAGAAAACA  50

seq1  AGGGGAAAACGTACACCTTTTCATCAAAGACAAACTCATAAATGGCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAACGTACACCTTTTCATCAAAGACAAACTCATAAATGGCACCT  100

seq1  AGAACTATAATCACCACGAAGCTAAATGACTACACAACAGCATAAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATAATCACCACGAAGCTAAATGACTACACAACAGCATAAGAACA  150

seq1  CAATTGATAATAACAAGAGCAACTTTCCCCACCAGAACCTAACTATCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGATAATAACAAGAGCAACTTTCCCCACCAGAACCTAACTATCCTA  200

seq1  CTAGAGCAAGCCCTGAAAATTCCAACACAGCTGAAGCAAAAGAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCAAGCCCTGAAAATTCCAACACAGCTGAAGCAAAAGAAAAAAAA  250

seq1  ATGCCTACCTTATGAAGATGATAGAAATCCTTTTGAGGAAATGAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTACCTTATGAAGATGATAGAAATCCTTTTGAGGAAATGAATAAAT  300

seq1  CTCCTAATGAAATGATAAAAATATCAATAAAATTGGAAGAAATTAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAATGAAATGATAAAAATATCAATAAAATTGGAAGAAATTAACAAA  350

seq1  AACTTAAATAAAGAAAATAAAGAAAGGAAGAAAGAAAGAGAGAAAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATAAAGAAAATAAAGAAAGGAAGAAAGAAAGAGAGAAAGAAAG  400

seq1  ACAGAAAGAAAGAGACAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGAAAGAGACAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  450

seq1  AGAGAGAGAGAAAGGGAGAAAGAATGGGAGAAAGAAGGGAAGGAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAAAGGGAGAAAGAATGGGAGAAAGAAGGGAAGGAAGAAGT  500

seq1  GATCAAAGGAACAGAAAATAATGGTTCCA  529
      |||||||||||||||||||||||||||||
seq2  GATCAAAGGAACAGAAAATAATGGTTCCA  529