BAC Information

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BAC

Clone NameB6Ng01-115N07
Chromosome1 (Build37)
Map Location 124,812,512 - 124,999,754
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666971
Downstream geneLOC666983, Dpp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115N07.bB6Ng01-115N07.g
ACCDH920994DH920995
length1,1541,137
definitionDH920994|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N07, 5' end.DH920995|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,812,512 - 124,813,679)(124,998,614 - 124,999,754)
sequence
gaattcactgtctcgtagagacaataaagcaaaggatagacaagacaaca
accaaaagagagcagccagaaacaaaaagttgattgatgaaggatgatag
attccatagataggaagcaaaacctagattccaggtctgcctagtgtggg
tcaggggtctggtttctcatgtttttcttatacccttcctcaagtgtttg
tgtctcagttggctcattccttctcataaactttctcataagaaaggaag
cagccaccttaggaagccctcttttttccctatctgcctgtatccttcca
tcactcctccatcaagtcaacagtcccatagatcttttcatttgtccttt
gaatcttctcttccttttatctactataatgtcttcctagatactgatct
acacctccccatgtttgagttagatctaattaattggtcacctctgctgc
taatgtttccttactatcttatttaaaatcagtttatcttcatttccaaa
atatatttttctctaatgtattttctgtcaacttacatttaccaattcgc
accatatcataatattttacttttatttactttctgcatgttgtactggg
tgtgctgttggtcatctagtcggttgcttgaggcaagatagcatggaggt
cagccacttgcggtgggtaggagaatttcaaaaccccagttgagctttgg
acagaacatgaaagaaaaagtcggaaaaggaaaaaacaacacttttctga
gttaggcctcagcaaggcaagctgacctagccaatcactatgggagctaa
gtgcctttgctttttagggaatgttactacagggaaagaattctgggtag
gagaaatgcattatcttaaagtgaatctgctttcccaagggtgggttccc
ttgccaggtccttgatgtgcctcattaacaataaaaaagaaaaggaaagg
aaagagaacattcctccaccgaatgtagagacagtgtttctattccttaa
gttacccctcaagagatagttctacatctcttagaaaatattctcatctc
cgtagcatcaaatatcagtagctctgcagaaggtgtgtgtcatcatatcc
aagctgcacaagtcccatgtagactgggatgtctttgtgcaggcactcag
aggt
gaattcaacatggattataagcaggaagagcctggagacattggtataaa
tagacacattgtaaggaattgctttagatggttaaagaaagttggtaagt
ttcaggaataacttgtctgtctgcagaaggccaggaccttaaatcataac
tccagtctgaagttcatggcatgtgagaataagagaggggtgatatttca
gtttttctcctaaagcaggaagtaaacaatgtccctgatataccaaaagg
attcttcatcagaagagtggtaccctctggttcttttcatgcccatcaca
ttgaggaatattatcttctttacccactctatcagtttcagtattgaacg
gctcccaaaacacacaaaagagtttgaccataccatctggatggccatat
tccagtgttccagtcatggtgacacagtaaaaatacaaaacaaaacaaaa
cacaacaacaacatgtagagtaaactaataattctaaggccagtttgtgt
ggcaagagccaggaaatttaaattacttttacagaggttcacgtccccta
tcatacatagttatatgaattcaggccacaattaaattatgttaaaatga
aatatttaacagtgaaggacacttatgccattttaaaaagaatatgccta
aaacttagtatttttgtctttgtttatatatatatatgcacatgaattat
aaaaataatatagctatattttaaatttttgctgtttttgagccctaatg
tctctctatagttcagacaggtctggatcttgttttctagcttgcactgg
ccttgaatcatgatccttctgcttcagcttcctgctcactggaaattaca
ttctactatatcttagtaatcttcttgactattagaaaatcatgtggggt
ttttttttcaaaatacactgaacaaatgcaaatagcacaaaatgttgtta
ttgaaattagtaccaggtgcttgttgaacagtatttcattcacaaggcct
gaccctcttggcctgtttcaatatcacaatcatagactcaagaagaaaaa
caatccacatgatagtgatctaaagaacaaacagaaggcaattgctcaaa
taacaaaggcagtgattcgactgaattatgaaattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_124812512_124813679
seq2: B6Ng01-115N07.b_49_1202

seq1  GAATTCACTGTCTCGTAGAGACAATAAAGCAAAGGATAGACAAGACAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTCTCGTAGAGACAATAAAGCAAAGGATAGACAAGACAACA  50

seq1  ACCAAAAGAGAGCAGCCAGAAACAAAAAGTTGATTGATGAAGGATGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAGAGAGCAGCCAGAAACAAAAAGTTGATTGATGAAGGATGATAG  100

seq1  ATTCCATAGATAGGAAGCAAAACCTAGATTCCAGGTCTGCCTAGTGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATAGATAGGAAGCAAAACCTAGATTCCAGGTCTGCCTAGTGTGGG  150

seq1  TCAGGGGTCTGGTTTCTCATGTTTTTCTTATACCCTTCCTCAAGTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGTCTGGTTTCTCATGTTTTTCTTATACCCTTCCTCAAGTGTTTG  200

seq1  TGTCTCAGTTGGCTCATTCCTTCTCATAAACTTTCTCATAAGAAAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGTTGGCTCATTCCTTCTCATAAACTTTCTCATAAGAAAGGAAG  250

seq1  CAGCCACCTTAGGAAGCCCTCTTTTTTCCCTATCTGCCTGTATCCTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACCTTAGGAAGCCCTCTTTTTTCCCTATCTGCCTGTATCCTTCCA  300

seq1  TCACTCCTCCATCAAGTCAACAGTCCCATAGATCTTTTCATTTGTCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCTCCATCAAGTCAACAGTCCCATAGATCTTTTCATTTGTCCTTT  350

seq1  GAATCTTCTCTTCCTTTTATCTACTATAATGTCTTCCTAGATACTGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCTCTTCCTTTTATCTACTATAATGTCTTCCTAGATACTGATCT  400

seq1  ACACCTCCCCATGTTTGAGTTAGATCTAATTAATTGGTCACCTCTGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCCCCATGTTTGAGTTAGATCTAATTAATTGGTCACCTCTGCTGC  450

seq1  TAATGTTTCCTTACTATCTTATTTAAAATCAGTTTATCTTCATTTCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTCCTTACTATCTTATTTAAAATCAGTTTATCTTCATTTCCAAA  500

seq1  ATATATTTTTCTCTAATGTATTTTCTGTCAACTTACATTTACCAATTCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTTCTCTAATGTATTTTCTGTCAACTTACATTTACCAATTCGC  550

seq1  ACCATATCATAATATTTTACTTTTATTTACTTTCTGCATGTTGTACTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATCATAATATTTTACTTTTATTTACTTTCTGCATGTTGTACTGGG  600

seq1  TGTGCTGTTGGTCATCTAGTCGGTTGCTTGAGGCAAGATAGCATGGAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGTTGGTCATCTAGTCGGTTGCTTGAGGCAAGATAGCATGGAGGT  650

seq1  CAGCCACTTGCGGTGGGTAGGAGAATTTCAAAACCCCAGTTGAGCTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACTTGCGGTGGGTAGGAGAATTTCAAAACCCCAGTTGAGCTTTGG  700

seq1  ACAGAACATGAAAGAAAAAGTCGGAAAAGGAAAAAACAACACTTTTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACATGAAAGAAAAAGTCGGAAAAGGAAAAAACAACACTTTTCTGA  750

seq1  GTTAGGCCTCAGCAAGGCAAGCTGACCTAGCCAATCACTATGGGAGCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGCCTCAGCAAGGCAAGCTGACCTAGCCAATCACTATGGGAGCTAA  800

seq1  GTGCCTTTGCTTTTTAGGGAATGTTACTACAGGGAAGGAATTCTGGGTAG  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTGCCTTTGCTTTTTAGGGAATGTTACTACAGGGAAAGAATTCTGGGTAG  850

seq1  GAGAAATGCATTATCTTAAAGTGAATCTGCTTTCCCAAGGGTGGGTTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGCATTATCTTAAAGTGAATCTGCTTTCCCAAGGGTGGGTTCCC  900

seq1  TTGCCAGGTCCTTGATGTGCCTCATTAACAATAAAAAAGAAAAGGAAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGGTCCTTGATGTGCCTCATTAACAATAAAAAAGAAAAGGAAAGG  950

seq1  AAAGAGAACATTCCTCCACCGAAATGTAGAGACAGTGTTTCTATTCCTTA  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAGAGAACATTCCTCCACCG-AATGTAGAGACAGTGTTTCTATTCCTTA  999

seq1  AGTTACCCCCTCAAAGAGATAGTTCTACATCTCTTAGAAAATAATTCTTC  1050
      ||||| |||||| ||||||||||||||||||||||||||||| |||| ||
seq2  AGTTA-CCCCTC-AAGAGATAGTTCTACATCTCTTAGAAAAT-ATTC-TC  1045

seq1  ATTCCTCCGTAGCCATCAAATATCAGTAGCTCTGCAGAAAGGTGTGTGGT  1100
      ||  |||||||| |||||||||||||||||||||||| ||||||||| ||
seq2  AT--CTCCGTAG-CATCAAATATCAGTAGCTCTGCAG-AAGGTGTGT-GT  1090

seq1  CATCATATCCCAGGCTGCACCAGGTCACAATGTAGACTGGGTTGGTCTTG  1150
      |||||||| ||| |||||| || ||| | |||||||||||| ||   |||
seq2  CATCATAT-CCAAGCTGCA-CAAGTC-CCATGTAGACTGGGATGTCTTTG  1137

seq1  TGCAGGCACTTCAGAGGT  1168
      ||||||||| ||||||||
seq2  TGCAGGCAC-TCAGAGGT  1154

seq1: chr1_124998614_124999754
seq2: B6Ng01-115N07.g_68_1204 (reverse)

seq1  TCAATTTCATAAATTTCAGTCGATATCACTGGCTTTGTTATTTGAGCAAT  50
      ||||||||||||  ||||||||| ||||||| ||||||||||||||||||
seq2  TCAATTTCATAA--TTCAGTCGA-ATCACTGCCTTTGTTATTTGAGCAAT  47

seq1  TGCTTCTTGTTTGTTCTTTAGATCACTATCATGT-GATATGTTTTCTTCT  99
      ||| |  ||||||||||||||||||||||||||| |||   |||||||||
seq2  TGCCTTCTGTTTGTTCTTTAGATCACTATCATGTGGATTGTTTTTCTTCT  97

seq1  TGAGTCCTATGGATTGTGATATTGGAAACAAGGCCAGAGGGTCAGGCC-T  148
      ||||| |||| |||||||||||| |||||| | | ||||||||||||| |
seq2  TGAGT-CTAT-GATTGTGATATT-GAAACAGGCCAAGAGGGTCAGGCCTT  144

seq1  GTGAATGAAATACTGTTCAAC-AGCACCTGGTACTAATTTCAAATAACAA  197
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  GTGAATGAAATACTGTTCAACAAGCACCTGGTACTAATTTC-AATAACAA  193

seq1  CATTTTGTGCTATTTGCATTTGTTCAGTGTATTTTGAAAAAAAAACCCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTGCTATTTGCATTTGTTCAGTGTATTTTGAAAAAAAAACCCCA  243

seq1  CATGATTTTCTAATAGTCAAGAAGATTACTAAGATATAGTAGAATGTAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTTCTAATAGTCAAGAAGATTACTAAGATATAGTAGAATGTAAT  293

seq1  TTCCAGTGAGCAGGAAGCTGAAGCAGAAGGATCATGATTCAAGGCCAGTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGAGCAGGAAGCTGAAGCAGAAGGATCATGATTCAAGGCCAGTG  343

seq1  CAAGCTAGAAAACAAGATCCAGACCTGTCTGAACTATAGAGAGACATTAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGAAAACAAGATCCAGACCTGTCTGAACTATAGAGAGACATTAG  393

seq1  GGCTCAAAAACAGCAAAAATTTAAAATATAGCTATATTATTTTTATAATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAAAAACAGCAAAAATTTAAAATATAGCTATATTATTTTTATAATT  443

seq1  CATGTGCATATATATATATAAACAAAGACAAAAATACTAAGTTTTAGGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCATATATATATATAAACAAAGACAAAAATACTAAGTTTTAGGCA  493

seq1  TATTCTTTTTAAAATGGCATAAGTGTCCTTCACTGTTAAATATTTCATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTTAAAATGGCATAAGTGTCCTTCACTGTTAAATATTTCATTT  543

seq1  TAACATAATTTAATTGTGGCCTGAATTCATATAACTATGTATGATAGGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAATTTAATTGTGGCCTGAATTCATATAACTATGTATGATAGGGG  593

seq1  ACGTGAACCTCTGTAAAAGTAATTTAAATTTCCTGGCTCTTGCCACACAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAACCTCTGTAAAAGTAATTTAAATTTCCTGGCTCTTGCCACACAA  643

seq1  ACTGGCCTTAGAATTATTAGTTTACTCTACATGTTGTTGTTGTGTTTTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTTAGAATTATTAGTTTACTCTACATGTTGTTGTTGTGTTTTGT  693

seq1  TTTGTTTTGTATTTTTACTGTGTCACCATGACTGGAACACTGGAATATGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTATTTTTACTGTGTCACCATGACTGGAACACTGGAATATGG  743

seq1  CCATCCAGATGGTATGGTCAAACTCTTTTGTGTGTTTTGGGAGCCGTTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGATGGTATGGTCAAACTCTTTTGTGTGTTTTGGGAGCCGTTCA  793

seq1  ATACTGAAACTGATAGAGTGGGTAAAGAAGATAATATTCCTCAATGTGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAACTGATAGAGTGGGTAAAGAAGATAATATTCCTCAATGTGAT  843

seq1  GGGCATGAAAAGAACCAGAGGGTACCACTCTTCTGATGAAGAATCCTTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGAAAAGAACCAGAGGGTACCACTCTTCTGATGAAGAATCCTTTT  893

seq1  GGTATATCAGGGACATTGTTTACTTCCTGCTTTAGGAGAAAAACTGAAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATCAGGGACATTGTTTACTTCCTGCTTTAGGAGAAAAACTGAAAT  943

seq1  ATCACCCCTCTCTTATTCTCACATGCCATGAACTTCAGACTGGAGTTATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCCTCTCTTATTCTCACATGCCATGAACTTCAGACTGGAGTTATG  993

seq1  ATTTAAGGTCCTGGCCTTCTGCAGACAGACAAGTTATTCCTGAAACTTAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGTCCTGGCCTTCTGCAGACAGACAAGTTATTCCTGAAACTTAC  1043

seq1  CAACTTTCTTTAACCATCTAAAGCAATTCCTTACAATGTGTCTATTTATA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTCTTTAACCATCTAAAGCAATTCCTTACAATGTGTCTATTTATA  1093

seq1  CCAATGTCTCCAGGCTCTTCCTGCTTATAATCCATGTTGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTCTCCAGGCTCTTCCTGCTTATAATCCATGTTGAATTC  1137