BAC Information

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BAC

Clone NameB6Ng01-115P02
Chromosome1 (Build37)
Map Location 30,639,977 - 30,641,065
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040665, LOC665944
Downstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115P02.bB6Ng01-115P02.g
ACCDH921071DH921072
length1,0861,161
definitionDH921071|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P02, 5' end.DH921072|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatctattgtaaagtctacttacatggattttgatgtgagaatt
cttaaaatcacctactgtttaaggtaataaactgtactctctcgttttcc
ttcctttctttgttatccttggtgaatagaacccctgacatttgagcttt
aaaaatgaataaattgtggagcctctattttgtctagaaacatacttctt
aacaggcagagtttcccaaaaattctcccctagcaggcagtgaagattcg
cgtcctttgttcatctctaggcctgccttcctcagtcatcgggatctaca
gtttacagacagtagctatgaggctcagggagattaagttctgttaagca
taagacataaatcttcacattccatgcatctgatgctgttatcaacaccc
aaaatacccacatggactatcttggcatatgccctaaggtcctctgccaa
ggttgctgggcagaagtgtggaacagacaaaaatctcacttctaagtccc
ctaggcagtcagtagcaatactaaccaaaaatgcagaagctccccaaacc
tcttcacatatgtccttcatttcctggttttgctttcctgttacgggtca
aagaagagacaaaacatggctaagaaaataaatgccaactccagagacta
ttgttgtttgttttagcttagtcttagtggaacaggagtcatgtaatttt
aaaaagtctataagacctaccgatcatctgatggtgactgcatattttta
gacatcagaaatttgccccccccccccatacctgtaaaagcaatatcccc
acagtcacaaagattgtcagagactgtcaatcaaaaatgagaacaaaagg
tgtcatctgggcatccctctctccctcagccgcagcctgctattacggaa
gtgttgtggcaccctgaatttgctattaggtgttgcgtaacccatggcgt
aatcttgcactccaagcgaaatttttatctaggattccaattagattcct
attgcacagggcaacacgtagcttgtggatactgcctctgcaacaacttc
agaagctcttgtggggtggactgcatgtcttctttt
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaagttcaggtgacagc
agaagctggcgaggatgtggagaaagaggaacactccttcattgctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgttccaaccggtaagaagggacacatgctccacta
tgttcatagcagccttacttataatagctagaagctggaaagatcccaga
tggccctcaacagaggaatggatacagaaaatgtggtacatttatacaat
ggagcactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatgaatctggagggcattaccctgagtgaggtaacccaatcacaa
aacagctcccattatatgtactcactgttatgtggatattagcccagaaa
cttagaatacccaagatataagttacaatttgcaaaacacataaaactca
agaagaacgaagaccaaagtgtggacactttgccccgtcttagaattggg
aacaaaacacccatggaaggggttacagagacaaagtttggagctgagac
aaaaggatggaccatctagagactgccatatccagggatctgtcccataa
tcagcctccaaacgctgacaccattgcacacactagcaagattttgctga
aaggatcctgatatagctgtctcttgtgagactatgccgggtcctagcaa
acacagaagtggatgctcacagtcagctattggatggatcacaggacccc
aattgaggagctaacgaaatacccagggagctaaagggacctgcaacctt
ataggtgacacatatgactaacttgtacccggagctctgactcttagctg
catatgtatgaaaagattgactagtgcatcacttgaagagagtcaatgga
ctgcaatttatatcgccagtagtaactccaggctcatagggtagtggctg
ctagtcgagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_30639977_30641065
seq2: B6Ng01-115P02.b_45_1130

seq1  GAATTCTATCTATTGTAAAGTCTACTTACATGGATTTTGATGTGAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTATTGTAAAGTCTACTTACATGGATTTTGATGTGAGAATT  50

seq1  CTTAAAATCACCTACTGTTTAAGGTAATAAACTGTACTCTCTCGTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATCACCTACTGTTTAAGGTAATAAACTGTACTCTCTCGTTTTCC  100

seq1  TTCCTTTCTTTGTTATCCTTGGTGAATAGAACCCCTGACATTTGAGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTTTGTTATCCTTGGTGAATAGAACCCCTGACATTTGAGCTTT  150

seq1  AAAAATGAATAAATTGTGGAGCCTCTATTTTGTCTAGAAACATACTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAATAAATTGTGGAGCCTCTATTTTGTCTAGAAACATACTTCTT  200

seq1  AACAGGCAGAGTTTCCCAAAAATTCTCCCCTAGCAGGCAGTGAAGATTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCAGAGTTTCCCAAAAATTCTCCCCTAGCAGGCAGTGAAGATTCG  250

seq1  CGTCCTTTGTTCATCTCTAGGCCTGCCTTCCTCAGTCATCGGGATCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTTTGTTCATCTCTAGGCCTGCCTTCCTCAGTCATCGGGATCTACA  300

seq1  GTTTACAGACAGTAGCTATGAGGCTCAGGGAGATTAAGTTCTGTTAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGACAGTAGCTATGAGGCTCAGGGAGATTAAGTTCTGTTAAGCA  350

seq1  TAAGACATAAATCTTCACATTCCATGCATCTGATGCTGTTATCAACACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATAAATCTTCACATTCCATGCATCTGATGCTGTTATCAACACCC  400

seq1  AAAATACCCACATGGACTATCTTGGCATATGCCCTAAGGTCCTCTGCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCCACATGGACTATCTTGGCATATGCCCTAAGGTCCTCTGCCAA  450

seq1  GGTTGCTGGGCAGAAGTGTGGAACAGACAAAAATCTCACTTCTAAGTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGGGCAGAAGTGTGGAACAGACAAAAATCTCACTTCTAAGTCCC  500

seq1  CTAGGCAGTCAGTAGCAATACTAACCAAAAATGCAGAAGCTCCCCAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGTCAGTAGCAATACTAACCAAAAATGCAGAAGCTCCCCAAACC  550

seq1  TCTTCACATATGTCCTTCATTTCCTGGTTTTGCTTTCCTGTTACGGGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACATATGTCCTTCATTTCCTGGTTTTGCTTTCCTGTTACGGGTCA  600

seq1  AAGAAGAGACAAAACATGGCTAAGAAAATAAATGCCAACTCCAGAGACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGACAAAACATGGCTAAGAAAATAAATGCCAACTCCAGAGACTA  650

seq1  TTGTTGTTTGTTTTAGCTTAGTCTTAGTGGAACAGGAGTCATGTAATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTGTTTTAGCTTAGTCTTAGTGGAACAGGAGTCATGTAATTTT  700

seq1  AAAAAGTCTATAAGACCTACCGATCATCTGATGGTGACTGCATA-TTTTA  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAAAGTCTATAAGACCTACCGATCATCTGATGGTGACTGCATATTTTTA  750

seq1  GACATCAGAAATTTGCCCCCCCCCCCCATACCTGTAAAAGCAATATCCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAGAAATTTGCCCCCCCCCCCCATACCTGTAAAAGCAATATCCCC  800

seq1  ACAGTCACAAAGATTGTCAGAGACTGTCAATCAAAAATGAGAACAAAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCACAAAGATTGTCAGAGACTGTCAATCAAAAATGAGAACAAAAGG  850

seq1  TGTCATCTGGGCATCCCTCTCTCCCTCAGCCGCAGCCTGCTATTACGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTGGGCATCCCTCTCTCCCTCAGCCGCAGCCTGCTATTACGGAA  900

seq1  GTGTTGTGGCACCCTGAATTTGCTATTAGGTGTTGCGTAACCCATGGCGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTGGCACCCTGAATTTGCTATTAGGTGTTGCGTAACCCATGGCGT  950

seq1  AATCTTGCACTCCAAGCGAAATTTTTATCTAGGATTCCAATTAGATTCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGCACTCCAAGCGAAATTTTTATCTAGGATTCCAATTAGATTCCT  1000

seq1  ATTGCACAGGGC-ACACGTAGCTTGTGGTTAACTGCCTCTGCAAACAACT  1048
      |||||||||||| ||||||||||||||| | ||||||||||| |||||||
seq2  ATTGCACAGGGCAACACGTAGCTTGTGGAT-ACTGCCTCTGC-AACAACT  1048

seq1  TCAGAAAGCTCTTGTGGGGTGGACTGCATGGTCCTTCTTTT  1089
      |||| |||||||||||||||||||||||||   ||||||||
seq2  TCAG-AAGCTCTTGTGGGGTGGACTGCATG--TCTTCTTTT  1086