BAC Information

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BAC

Clone NameB6Ng01-116C07
Chromosome1 (Build37)
Map Location 178,383,836 - 178,385,065
singlet/doubletsinglet
Overlap genenone
Upstream geneRgs7, Fh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
Downstream geneCep170, Sdccag8, LOC666235, Akt3, Zfp238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116C07.bB6Ng01-116C07.g
ACCDH921217DH921218
length1,2121,172
definitionDH921217|Mus musculus domesticus DNA, BAC clone: B6Ng01-116C07, 5' end.DH921218|Mus musculus domesticus DNA, BAC clone: B6Ng01-116C07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgttttggttagttaaagtctaaaggaagactggaggagag
tagtctctggaaacctggtgtcttagttagggtttccattgctgtgagga
gacacaatagccaaggcaactcctataaaggacaacatttaattgtggct
agcttacaacttcagaggttcagtcctttatcatcatgtcaagaagcatg
gtagcatccaggccgatggggggctggagaagccaaaagttctacatctt
gatccaaaggcagccataagaagacccttttctgccctgggtggagcctg
aacatagagggaaacccccaaagcctatccccgcagtgatacatacactt
cctccaacaaggccacacctcctaactatatcactctctatgggccaagc
atattcaaaccaccacacttgagtaaagggctggctgcagttaggtctgg
gtctgaaggcagacgggatggaggaacctttgtagcccctcctccacctc
catcctttctcagggctcagctgatgccataggcactggtatgacttttg
gcttatttctatttaccccctacaaataaataatgcattaatgttattca
tttctttatgtaataactgcaaagggaaaaagccaaagccattttcatgt
ctcagaaatgacagaaaactctatgtcctttggaaagaaaactctgagca
ataaatgcaagcattagaactgaggtaggaacctggttggaacaccagag
aataatccagtagaatcccagtccaaagcaataagcagtaacatggtccc
tgtcccttcacagatgtgccgagaaaacccaagctccttgtgttgtcccc
ttgtgtcctacctgataaggtgagaggattatattttattttattttctt
tattttaggagccatgtctggcactgttatcaaggctaacagaggtaggt
tctctactttgcagaagatgcaaagtgctcagggatagccacatgttcct
tctgttatctcatcagcaaagccattcatcattgcatttcactcatactc
ttcctctggggaggatccctggtacaccaggctctacttgctgaatgcca
acagttctagagcatgtgacatatgattgtgacctatcaagaggtcaaga
gctggtaacataaactagcatactatccacttagtccaagatagggatca
gactctactacg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
ttatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccaa
tggagagctagagaaagtagccagagctaaaggatctgcaccctataagg
tggaacacattatgagctaccagtacccgaagctccttgactctagctgc
atatttatcaaagatgggctagtcggccatcactggaaagaagtcattgg
acttgcaaacttttaatggccagtccagggaatacaggccaaatggtgag
gtgtgggctagggatgtgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_178383836_178385065
seq2: B6Ng01-116C07.b_48_1259 (reverse)

seq1  CGTAGTAGAGGGTCTTGATCCCTATACTGTGGGCATAAGTGGTATGTATG  50
      |||||||||  ||| |||||||||| || ||| | |||||||   |||| 
seq2  CGTAGTAGA--GTC-TGATCCCTAT-CT-TGGAC-TAAGTGGATAGTAT-  43

seq1  GCTATGTTTATGTAACCAGACCTCTTGAACCTCTTTGATTGGGGTCAC-A  99
      |||| |||||||| |||||  |||||| ||||| |||||   |||||| |
seq2  GCTA-GTTTATGTTACCAG--CTCTTG-ACCTC-TTGAT--AGGTCACAA  86

seq1  TCATATGTCACATGCTTCTAGAAACTGTTTGGCATTCAGCAAGTAGAGCC  149
      ||||||||||||||| ||||| ||||| ||||||||||||||||||||||
seq2  TCATATGTCACATGC-TCTAG-AACTG-TTGGCATTCAGCAAGTAGAGCC  133

seq1  TGGTGTACCAGGGATCCTCCCCAGAGGAAGATGTATGAGTGAAATGCAAT  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGTGTACCAGGGATCCTCCCCAGAGGAAGA-GTATGAGTGAAATGCAAT  182

seq1  GATGAATGGCTTTGCTGATGAGATAACAGAAGGAACATGTGGCTATCCCC  249
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GATGAATGGCTTTGCTGATGAGATAACAGAAGGAACATGTGGCTAT-CCC  231

seq1  TGAGCACTTTGCATCTTCTGCAAAGTAGAGAACCTACCTCTGTTAGCCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACTTTGCATCTTCTGCAAAGTAGAGAACCTACCTCTGTTAGCCTT  281

seq1  GATAACAGTGCCAGACATGGCTCCTAAAATAAAGAAAATGAAATAAAATA  349
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GATAACAGTGCCAGACATGGCTCCTAAAATAAAGAAAATAAAATAAAATA  331

seq1  TAATCCTCTCACCTTATCAGGTAGGACACAAGGGGACAACACAAGGAGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTCTCACCTTATCAGGTAGGACACAAGGGGACAACACAAGGAGCT  381

seq1  TGGGTTTTCTCGGCACATCTGTGAAGGGACAGGGACCATGTTACTGCTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTCTCGGCACATCTGTGAAGGGACAGGGACCATGTTACTGCTTA  431

seq1  TTGCTTTGGACTGGGATTCTACTGGATTATTCTCTGGTGTTCCAACCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGGACTGGGATTCTACTGGATTATTCTCTGGTGTTCCAACCAGG  481

seq1  TTCCTACCTCAGTTCTAATGCTTGCATTTATTGCTCAGAGTTTTCTTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACCTCAGTTCTAATGCTTGCATTTATTGCTCAGAGTTTTCTTTCC  531

seq1  AAAGGACATAGAGTTTTCTGTCATTTCTGAGACATGAAAATGGCTTTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACATAGAGTTTTCTGTCATTTCTGAGACATGAAAATGGCTTTGGC  581

seq1  TTTTTCCCTTTGCAGTTATTACATAAAGAAATGAATAACATTAATGCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTTTGCAGTTATTACATAAAGAAATGAATAACATTAATGCATT  631

seq1  ATTTATTTGTAGGGGGTAAATAGAAATAAGCCAAAAGTCATACCAGTGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGTAGGGGGTAAATAGAAATAAGCCAAAAGTCATACCAGTGCC  681

seq1  TATGGCATCAGCTGAGCCCTGAGAAAGGATGGAGGTGGAGGAGGGGCTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCATCAGCTGAGCCCTGAGAAAGGATGGAGGTGGAGGAGGGGCTAC  731

seq1  AAAGGTTCCTCCATCCCGTCTGCCTTCAGACCCAGACCTAACTGCAGCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTCCTCCATCCCGTCTGCCTTCAGACCCAGACCTAACTGCAGCCA  781

seq1  GCCCTTTACTCAAGTGTGGTGGTTTGAATATGCTTGGCCCATAGAGAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTACTCAAGTGTGGTGGTTTGAATATGCTTGGCCCATAGAGAGTG  831

seq1  ATATAGTTAGGAGGTGTGGCCTTGTTGGAGGAAGTGTATGTATCACTGCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTAGGAGGTGTGGCCTTGTTGGAGGAAGTGTATGTATCACTGCG  881

seq1  GGGATAGGCTTTGGGGGTTTCCCTCTATGTTCAGGCTCCACCCAGGGCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGCTTTGGGGGTTTCCCTCTATGTTCAGGCTCCACCCAGGGCAG  931

seq1  AAAAGGGTCTTCTTATGGCTGCCTTTGGATCAAGATGTAGAACTTTTGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGTCTTCTTATGGCTGCCTTTGGATCAAGATGTAGAACTTTTGGC  981

seq1  TTCTCCAGCCCCCCATCGGCCTGGATGCTACCATGCTTCTTGACATGATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGCCCCCCATCGGCCTGGATGCTACCATGCTTCTTGACATGATG  1031

seq1  ATAAAGGACTGAACCTCTGAAGTTGTAAGCTAGCCACAATTAAATGTTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGACTGAACCTCTGAAGTTGTAAGCTAGCCACAATTAAATGTTGT  1081

seq1  CCTTTATAGGAGTTGCCTTGGCTATTGTGTCTCCTCACAGCAATGGAAAC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATAGGAGTTGCCTTGGCTATTGTGTCTCCTCACAGCAATGGAAAC  1131

seq1  CCTAACTAAGACACCAGGTTTCCAGAGACTACTCTCCTCCAGTCTTCCTT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTAAGACACCAGGTTTCCAGAGACTACTCTCCTCCAGTCTTCCTT  1181

seq1  TAGACTTTAACTAACCAAAACAAAGGAATTC  1230
      |||||||||||||||||||||||||||||||
seq2  TAGACTTTAACTAACCAAAACAAAGGAATTC  1212