BAC Information

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BAC

Clone NameB6Ng01-116F23
Chromosome1 (Build37)
Map Location 81,366,365 - 81,367,255
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620899, 1700016L21Rik, Dock10, LOC665092, 9430031J16Rik
Downstream geneEG621020, LOC433328, EG665145, Irs1, Rhbdd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116F23.g
ACCDH921387
length938
definitionDH921387|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttggcagggaggcaggagtgggtgggtgggggaccggatatca
ctgaccagagggatgttggaaggaggaatggggtgtatttctaaatgtaa
ttctgaactgttcttttctttctaataaaagaggtgcaagcatcttggcg
aaatcaatcttgctgtcacctgtgtgacaagtgtgggcacatccctgttt
aaacaagagtattaaaaactaaagaaaactaaatttaaaaaaaatggcaa
cagagaaaatgtagcggggcttaattttattggcacattcacctatacat
tccacaaaaatattgggtaacccaaagggcacagcagcctactgggatcc
ggcttggcttagctctcggctacgctctgcatcactcagttttgcttgtg
gttcaggaatcagaatcccggggtggatgagtggaagaaaggagagtaat
atcccgattttctctttaacaaaaaaatctcattgttatgaatgaacctt
ttctataatggagaaagcaaaaaaaaaaaaaattcacagatcttgtatct
tctatgtgttgagtctggaaaaaaccactatagcatgacagagtatggcc
aattccagatttaaccgggaatgagatataaaagcctagtttgtgtgttt
ggaagaacacaaaaatgtgtgtccaaagggattttttgaaaggggcgttc
aatgatgtgaccccactgtccaggttcacttttttatgaattaaggagcc
gtgatttaacttccaagagcatagctatcataggttacctccactggaag
accacaacatccttgttaactagatatctgctttcttggttgagagtaaa
aagatgtacatgctagctagtacttaacatctcgccgtatgtgggatgct
cctttggatccatctgactaacaatttttccccttgtt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81366365_81367255
seq2: B6Ng01-116F23.g_108_1003

seq1  GGATATCACTGA-GAGATTAAATGTTGGAAGTAAGGAAGTGGGGTGTATT  49
      ||||||||||||  |||    ||||||||||  ||||| |||||||||||
seq2  GGATATCACTGACCAGA-GGGATGTTGGAAG-GAGGAA-TGGGGTGTATT  47

seq1  TCTAAATGTAATTCTGAACTGTTCTTTTCTTTCTAATAAAAGAGGTGCAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATGTAATTCTGAACTGTTCTTTTCTTTCTAATAAAAGAGGTGCAA  97

seq1  GCATCTTGGCGAAATCAATCTTGCTGTCACCTGTGTGACAAGTGTGGGCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGGCGAAATCAATCTTGCTGTCACCTGTGTGACAAGTGTGGGCA  147

seq1  CATCCCTGTTTAAACAAGAGTATTAAAAACTAAAGAAAACTAAATTTAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGTTTAAACAAGAGTATTAAAAACTAAAGAAAACTAAATTTAAA  197

seq1  AAAAATGGCAACAGAGAAAATGTAGCGGGGCTTAATTTTATTGGCACATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGCAACAGAGAAAATGTAGCGGGGCTTAATTTTATTGGCACATT  247

seq1  CACCTATACATTCCACAAAAATATTGGGTAACCCAAAGGGCACAGCAGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATACATTCCACAAAAATATTGGGTAACCCAAAGGGCACAGCAGCC  297

seq1  TACTGGGATCCGGCTTGGCTTAGCTCTCGGCTACGCTCTGCATCACTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGATCCGGCTTGGCTTAGCTCTCGGCTACGCTCTGCATCACTCAG  347

seq1  TTTTGCTTGTGGTTCAGGAATCAGAATCCCGGGGTGGATGAGTGGAAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTGTGGTTCAGGAATCAGAATCCCGGGGTGGATGAGTGGAAGAA  397

seq1  AGGAGAGTAATATCCCGATTTTCTCTTTAACAAAAAAATCTCATTGTTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTAATATCCCGATTTTCTCTTTAACAAAAAAATCTCATTGTTAT  447

seq1  GAATGAACCTTTTCTATAATGGAGAAAGCAAAAAAAAAAAAAATTCACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAACCTTTTCTATAATGGAGAAAGCAAAAAAAAAAAAAATTCACAG  497

seq1  ATCTTGTATCTTCTATGTGTTGAGTCTGG-AAAAACCACTATAGCATGAC  548
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCTTGTATCTTCTATGTGTTGAGTCTGGAAAAAACCACTATAGCATGAC  547

seq1  AGAGTATGGCCAATTCCAGATATAACCAGGGAATGAGATATAAAAGCCTA  598
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  AGAGTATGGCCAATTCCAGATTTAACC-GGGAATGAGATATAAAAGCCTA  596

seq1  GTTTGTGTGTTTGGAAGAACACAAAAATGTGTGTCCAAAGGGA-TTTTTG  647
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTTTGTGTGTTTGGAAGAACACAAAAATGTGTGTCCAAAGGGATTTTTTG  646

seq1  AAA-GGGTGTACAATGATGTGA-CCCACTGTCCAGG-TCTC-TTTTTAGG  693
      ||| ||| || ||||||||||| ||||||||||||| || | |||||| |
seq2  AAAGGGGCGTTCAATGATGTGACCCCACTGTCCAGGTTCACTTTTTTATG  696

seq1  AATTAAGGAGCCGTGATATAACTTCCAAGAGCATTGCTATCATTGGCTAC  743
      ||||||||||||||||| |||||||||||||||| |||||||| || |||
seq2  AATTAAGGAGCCGTGATTTAACTTCCAAGAGCATAGCTATCATAGGTTAC  746

seq1  CTCCACTGGAAGACCACACCTTCCTTGTATAATAGACATCTGC-TTCCTG  792
      |||||||||||||||||| | |||||||  | |||| |||||| ||| ||
seq2  CTCCACTGGAAGACCACAACATCCTTGTTAACTAGATATCTGCTTTCTTG  796

seq1  GTTGAGAGTAAAAAGATGTACATACTAGCTAGTACTT-ACATCTCAGCGT  841
      ||||||||||||||||||||||| ||||||||||||| |||||||  |||
seq2  GTTGAGAGTAAAAAGATGTACATGCTAGCTAGTACTTAACATCTCGCCGT  846

seq1  ATGTAGGGATGCTCTTTGGGATCCATCTG-CACACTTTTTTTCCCTTTGT  890
      |||| ||||||||| || ||||||||||| |  ||  |||||||| ||||
seq2  ATGT-GGGATGCTCCTTTGGATCCATCTGACTAACAATTTTTCCCCTTGT  895

seq1  T  891
      |
seq2  T  896