BAC Information

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BAC

Clone NameB6Ng01-116K18
Chromosome1 (Build37)
Map Location 182,760,729 - 182,761,134
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042190, Cdc42bpa, Cabc1, Psen2, EG277333, Itpkb, 6330403A02Rik, Gm821, Parp1, Lin9, Mixl1, LOC666431, Acbd3, H3f3a
Downstream geneBC031781, Lefty2, Pycr2, Lefty1, Tmem63a, Ephx1, 9130409I23Rik, EG625597, Fgfr3-ps, Nvl, Cnih4, Wdr26, LOC100042363, LOC666519, Cnih3, Ccdc121, A230079K17Rik, Lbr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116K18.bB6Ng01-116K18.g
ACCDH921613DH921614
length4001,083
definitionDH921613|Mus musculus domesticus DNA, BAC clone: B6Ng01-116K18, 5' end.DH921614|Mus musculus domesticus DNA, BAC clone: B6Ng01-116K18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctgtccaagccccaaggtactgctgttagatgtagagagagcctgttttc
cacgttggctcttctccctctccaaatccgagggagtgattctgtccagt
cacctacagagcctgtcagcagcgtcgcagatatatggcttcttgcacaa
tggctgggctctgtgaacccgcctcttattccattttcaacttcaggctg
gataaacactaccaaagggaccaaagagaatgagcattatctagggaacg
tacttacagagcctcacatgcagtgtgtttcctggattcccgaaagaggt
gtgccgcagatgaaatgaggtgtcttgtttcaaacaacacgaagctaatg
acctgggtgcggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtg

gaattccaagctcagggtcagcttcaaggactttctgggaaccattggaa
cactggtgaaggcttagctataggtcaaaatcaatccttaaaggcactta
taaaaaaacaatactgaaagagagcacatggatctgtacaccagactaac
gtggggataggttttgagtatacgggctatgggaatgccaaggttccagg
aggcaaagtttccttgaaattctttgtctcaggactgcttccaggttttc
aggcctgtcatgcctgtcactactggagtggatgtagcactatataagta
acaaattgtttttcagtagctctttctacttgtcgtaaggccaacaaccc
ttttgaagttaaaactccagaagagataggatcagaactacccctaagaa
tatcaaataagggttttaattctcctgtagtaagctttaaataaggacga
atccaagtaatatcaactaacagcttttgaaaaccatttaaggttttaaa
attgtccctatgaatagttattttctgaggaaaaacagcttaatctgtaa
gcctaaaacctaaataattataaggatcttgagtttgcaccttttctgga
gctatttgtaatcctttatcagctaatgcctgctgtgaatttctataaat
tagaagcaagtcctgaggatccttccctgctaataagatatcatccatgt
aatgtataatgtatattattggctattgctgtctattaggctgaatggct
tgtgtcacaaattttttgacataatgtaggactgttagccatgccttgag
aaagaactatccattgataccttttcattggctctttaaaattaatataa
agaacatctgaaaggaaatctttcccaatcctgaggatgcaaagaatagt
aaagaaacatcttttcaaatctactactatttataatatcctttatgatt
tattttatttttcaatttttattagatattttcttcattacatttcaaat
gctatcccaaaagtcccttatactccccacccccacctgctttcttcccc
acccactcctactcttgggcctggtgatcccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_182760729_182761134
seq2: B6Ng01-116K18.b_45_450

seq1  GAATTCCTGTCCAAGCCCCAAGGTACTGCTGTTAGATGTAGAGAGAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCCAAGCCCCAAGGTACTGCTGTTAGATGTAGAGAGAGCCT  50

seq1  GTTTTCCACGTTGGCTCTTCTCCCTCTCCAAATCCGAGGGAGTGATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCACGTTGGCTCTTCTCCCTCTCCAAATCCGAGGGAGTGATTCTG  100

seq1  TCCAGTCACCTACAGAGCCTGTCAGCAGCGTCGCAGATATATGGCTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCACCTACAGAGCCTGTCAGCAGCGTCGCAGATATATGGCTTCTT  150

seq1  GCACAATGGCTGGGCTCTGTGAACCCGCCTCTTATTCCATTTTCAACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATGGCTGGGCTCTGTGAACCCGCCTCTTATTCCATTTTCAACTTC  200

seq1  AGGCTGGATAAACACTACCAAAGGGACCAAAGAGAATGAGCATTATCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGATAAACACTACCAAAGGGACCAAAGAGAATGAGCATTATCTAG  250

seq1  GGAACGTACTTACAGAGCCTCACATGCAGTGTGTTTCCTGGATTCCCGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGTACTTACAGAGCCTCACATGCAGTGTGTTTCCTGGATTCCCGAA  300

seq1  AGAGGTGTGCCGCAGATGAAATGAGGTGTCTTGTTTCAAACAACACGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGTGCCGCAGATGAAATGAGGTGTCTTGTTTCAAACAACACGAAG  350

seq1  CTAATGACCTGGGTGCGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGACCTGGGTGCGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400

seq1  TGTGTG  406
      || |||
seq2  TGGGTG  406