BAC Information

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BAC

Clone NameB6Ng01-116O07
Chromosome1 (Build37)
Map Location 70,868,870 - 70,869,897
singlet/doubletsinglet
Overlap geneA830006F12Rik
Upstream geneSpag16, LOC100043210
Downstream geneEG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116O07.bB6Ng01-116O07.g
ACCDH921776DH921777
length1,2511,025
definitionDH921776|Mus musculus domesticus DNA, BAC clone: B6Ng01-116O07, 5' end.DH921777|Mus musculus domesticus DNA, BAC clone: B6Ng01-116O07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttttgctctgtaccccatttttaaatggggttatttgagt
ttctggagtccagcttcttgagctctttgtatatattgggtattagtccc
atataagatttagaattggtaaaaatcctttcccaatctgttggtgactt
ttttgtcttattgacagtgtctttggcccatttgtcaattcttgatctta
cagcataagacattgctgttcagtttaggaatttttcccctgtgcccata
tctttgaggcttttccccactttctcctctatgaatttcagtgtctctgg
ttctatgtagaattctttgatccacttacacttgagctttgtacaaggag
ataagaatggatcaatttgcattcttctacatgataaccgccggttgtgc
cagcaccatttgttgaaaattctgtcttttttccactggatggttttagc
tcccttgtcaaagatcaagtgaccacaggtgtgtggattcatttctgggt
cttcaattctactccattgatctacttgtctgtcgctgtaccagtaccat
gcagtttttatcacaattgctctgtagtacagcttgaggtcaggcatggt
gattccaccagagctttgtttattgttgagaatagtttttgctatcctag
gttttttattattctggatgaatttgcaaattgccctttctaactcagtg
aagaattgagttggggattgcattgaatctgtagattgcttttggcaaga
tagccattttgagtatattgatcccgccaattcatgagcatgtgagatct
ttccatcttctgagatcttcatttttttcttcagagacttgaagttctta
tcatacagatctttcacttccttagttagagtcacaccaaggtattttat
attatttgtgactattgtgaagggtattgtttccctaatttctttctcag
cccgttttattctttgtgtagagaaaggccattgatttgtttgagttatt
tatattccagctacttcactgaagcttgtttatcagcttagggtgttctc
tggtggaattttagggtcacttatataactatcatatccatctgcaatag
gggatatttgacttcttccttgacattgtatccttgatccttttgtgggt
gaaattctctggccagacttcagaatcatatggaatgaggaaatggcaac
cctgcctagtcgattaagtggatgtctcagaatctttgggagaataaaga
t
gaattctcagatgtatgaaatcttcccacagtatgatcagccctctggca
ttctcagatcattcagaaatgtgaatgaatgtcagatgccaaaagtggtc
tttaagtatgatgatgacgggggtggatattggttgagaaactgcctttg
gctctgggttttatttatcaatgaaaactgactgataattcagctggatc
tgaacactcacaatgacagctccgtctttaaggctataaatgtgatacct
tgtttactgggttctcaattgttaaggttcatatgaaaggttgattcatt
tctataataatttacttcacatttggatttttctctcgtcagcctttttg
ctataatcatttaaagattatctgtgtgatagtatcagtcatagaaagaa
agcattattactatgtcaagtgtaaacaacagatccattaaagcatcaat
ttctcctctctaagtaatatcttcttcctattccttgacatcactttatg
taacacagttcaataatatattttaatattaaagcaatattttacaaaca
tacttgaaactcccttttccattaattttagtctttgtctagaagcagac
atataatgatgataataaacctagttattttctacactcaaataccacga
cctgatccagaatattttagttgctaaggggctgtatttttaccaaacaa
atagtacactgggagtatttatttatttatctacttatttacttcaatct
tatacagactaggatatttaagttctgataatgcttgctttatgtagaca
tcttttattgtccaacagcacatgacctaatgatgagggaagagaaggct
gtattctgtaaaacgtacacatgtctgagcactgtcagtctttttttttt
tttttttttgggaagaatgcattattccaaattggctaatcaccagtttc
tatctcgtttatgaccagctaaaaaaattgtataaaatatatgcacagct
gcgatctagagggaagatcatttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70868870_70869897
seq2: B6Ng01-116O07.g_69_1093

seq1  GAATTCTCAGATGTATGAAATCTTCCCACAGTATGATCAGCCCTCTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGATGTATGAAATCTTCCCACAGTATGATCAGCCCTCTGGCA  50

seq1  TTCTCAGATCATTCAGAAATGTGAATGAATGTCAGATGCCAAAAGTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGATCATTCAGAAATGTGAATGAATGTCAGATGCCAAAAGTGGTC  100

seq1  TTTAAGTATGATGATGACGGGGGTGGATATTGGTTGAGAAACTGCCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTATGATGATGACGGGGGTGGATATTGGTTGAGAAACTGCCTTTG  150

seq1  GCTCTGGGTTTTATTTATCAATGAAAACTGACTGATAATTCAGCTGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGTTTTATTTATCAATGAAAACTGACTGATAATTCAGCTGGATC  200

seq1  TGAACACTCACAATGACAGCTCCGTCTTTAAGGCTATAAATGTGATACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTCACAATGACAGCTCCGTCTTTAAGGCTATAAATGTGATACCT  250

seq1  TGTTTACTGGGTTCTCAATTGTTAAGGTTCATATGAAAGGTTGATTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTGGGTTCTCAATTGTTAAGGTTCATATGAAAGGTTGATTCATT  300

seq1  TCTATAATAATTTACTTCACATTTGGATTTTTCTCTCGTCAGCCTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAATAATTTACTTCACATTTGGATTTTTCTCTCGTCAGCCTTTTTG  350

seq1  CTATAATCATTTAAAGATTATCTGTGTGATAGTATCAGTCATAGAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATCATTTAAAGATTATCTGTGTGATAGTATCAGTCATAGAAAGAA  400

seq1  AGCATTATTACTATGTCAAGTGTAAACAACAGATCCATTAAAGCATCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTATTACTATGTCAAGTGTAAACAACAGATCCATTAAAGCATCAAT  450

seq1  TTCTCCTCTCTAAGTAATATCTTCTTCCTATTCCTTGACATCACTTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTCTAAGTAATATCTTCTTCCTATTCCTTGACATCACTTTATG  500

seq1  TAACACAGTTCAATAATATATTTTAATATTAAAGCAATATTTTACAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGTTCAATAATATATTTTAATATTAAAGCAATATTTTACAAACA  550

seq1  TACTTGAAACTCCCTTTTCCATTAATTTTAGTCTTTGTCTAGAAGCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAAACTCCCTTTTCCATTAATTTTAGTCTTTGTCTAGAAGCAGAC  600

seq1  ATATAATGATGATAATAAACCTAGTTA-TTTCTACACTCAAATACCACGA  649
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATATAATGATGATAATAAACCTAGTTATTTTCTACACTCAAATACCACGA  650

seq1  CCTGATCCAGAATA-TTTAGTTGCTAAGGGGCTGTA-TTTTACCAAACAA  697
      |||||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  CCTGATCCAGAATATTTTAGTTGCTAAGGGGCTGTATTTTTACCAAACAA  700

seq1  ATAGTACACTGGGAGTATTTATTTATTTATCTACTTATTTACTTCAATCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTACACTGGGAGTATTTATTTATTTATCTACTTATTTACTTCAATCT  750

seq1  TATACAGAACTAGGATA-TTAAGTTCTGATAATGCTTGCTTTATGTAGAC  796
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  TATACAG-ACTAGGATATTTAAGTTCTGATAATGCTTGCTTTATGTAGAC  799

seq1  ATCTTTTATTGGACCAACAGCACATGACCTAATGATGA-GGAAGAGAAGG  845
      |||||||||| | ||||||||||||||||||||||||| |||||||||||
seq2  ATCTTTTATT-GTCCAACAGCACATGACCTAATGATGAGGGAAGAGAAGG  848

seq1  CTGTATCCTGTAAAAACGTACACATGTCTGAGCACTGTCAGTCTTTTTTT  895
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCTGT-AAAACGTACACATGTCTGAGCACTGTCAGTCTTTTTTT  897

seq1  TTTTTTTTTTTTTGGTAGAAATGCATTATTCCAAAATTGGCATAATCA-C  944
      |||||||||||| || || ||||||||||||| |||||||| |||||| |
seq2  TTTTTTTTTTTTGGGAAG-AATGCATTATTCC-AAATTGGC-TAATCACC  944

seq1  AGTTTCTATCTCGTTTATGACCAGCATAAAAAAATTGCATAAAATATCAT  994
      ||||||||||||||||||||||||| ||||||||||| ||||||||| ||
seq2  AGTTTCTATCTCGTTTATGACCAGC-TAAAAAAATTGTATAAAATAT-AT  992

seq1  GCACAGCTGCAGTC-AGAGGGAAGATTCAATTTGG  1028
      ||||||||||  || |||||||||||   ||||||
seq2  GCACAGCTGCGATCTAGAGGGAAGAT--CATTTGG  1025