BAC Information

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BAC

Clone NameB6Ng01-117P22
Chromosome1 (Build37)
Map Location 114,944,827 - 114,946,001
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626897, LOC666615, LOC666635
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117P22.bB6Ng01-117P22.g
ACCDH922591DH922592
length1,164835
definitionDH922591|Mus musculus domesticus DNA, BAC clone: B6Ng01-117P22, 5' end.DH922592|Mus musculus domesticus DNA, BAC clone: B6Ng01-117P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaatctcaaatcacttcatatttttctttataatttgcaaaa
actggaagaaaagagcattatcatagcagttctcacaatttgttttcaaa
tcttgatagactgtatacagattatgaatgcatagataaataaatctttt
taattatatattttctgtatttacattttaaattttatcccctttcattt
cccttctaaaaagcccctatttcattccccctccccctgctcactaaccc
acacactaacacttccctttcctggcattcccctacactggggcttttca
ccagaccaagggcctctcctctcattgatatcccacaagaacattctctg
ttacatatgcagctgaagccatggttccctccatgtgcactcttgggttg
gtgctttagtccttgggagctctaggggtactggttggtacatattgttg
ttcctcctatgaagctgcaaacctcttgatctccttaggtcctttccctg
gctcctccattggatactctgtgctcagtacaatggatggctgtgtgagt
tcacctctataataaatctttttattaagccctgcacaagctagtgtttg
aatacctggtcattaggaaatggtcctgtgtatcttaagattgtggaaag
gaaacttgactgtgaaacctagtaccacttcctgtgcatttctatttctt
tcttactcacaaatgattaagtagcatcatatacttgttccactctcccc
aaagatttcctaccacaataatataccttaaaaatattagctaagtaatc
tagttcctgaagtagttatgttcttggtcatagcaataataaaagttatt
aatacagtatccataacactaccacagaaacgaaatcatggctaagaata
aatgtgaataactttaataattaagccaagactgtaggcaaaagtcagca
ctattcatgaacaagcaaatcaaccagaaagaaaatgtatattggtaaat
cattgtaggtactaaatgatataataaatgctatacgatcagatatgact
aaaatcaaagaacaggaaaacattttgagacatgtagaatgtgtgtgggt
tcatggctgctgtaaaatgattggaatagccttacttatgaaacaaacct
ttttcacccatgct

gaattccaaataaacttagcatccaaaaagccaatggccatcaaatagtg
atacacatttcagaaagactctgccttttaatatgcacaggtagaaaacc
tacattataaataggcaacctcttgagattagagattggggggggaccct
ccagaatgcaccaaagacttgggaggtgagagacactcaggacacaaaag
gagggaccccagatgaaatgcccaacagtagggagaaggaacttatagag
cccatctccagcaggaagacagggcatcaaatcagagagaggatgactat
cccatggtcacaactctgacccataattgttcctgtctgaaataattaca
gggatggaaatagagagaagtctgaagaaaagcaggtccaagaacaggcc
caaagtgggattcagctcaaggggaggttccaaggcctgacactattact
gaggctatggtgtacttacaaaaaggacctagcatgacctcactctggaa
gacccaacaaggagctgaaagagtcagatgcagatatttgcacccagtca
atggtcagaagaagctaactcccattgtttaattagagaaggctgaaaga
agctgaggagaagtgtgatactgtaggaggaacagcagtctaaatttacc
tgaacccccaagatttctcaaacactggaccaccaaacaggcagcataca
ccaactgatatgaagccccagacacacatacaatagaggacttccaggtc
tctgtttattcagagatgatgcacctagagattggaggccccagggattt
tagaggtcaggtggggtgggcggtggggagggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114944827_114946001
seq2: B6Ng01-117P22.b_48_1211

seq1  GAATTCATCAATCTCAAATCACTTCATATTTTTCTTTATAATTTGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAATCTCAAATCACTTCATATTTTTCTTTATAATTTGCAAAA  50

seq1  ACTGGAAGAAAAGAGCATTATCATAGCAGTTCTCACAATTTGTTTTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGAAAAGAGCATTATCATAGCAGTTCTCACAATTTGTTTTCAAA  100

seq1  TCTTGATAGACTGTATACAGATTATGAATGCATAGATAAATAAATCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATAGACTGTATACAGATTATGAATGCATAGATAAATAAATCTTTT  150

seq1  TAATTATATATTTTCTGTATTTACATTTTAAATTTTATCCCCTTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATATATTTTCTGTATTTACATTTTAAATTTTATCCCCTTTCATTT  200

seq1  CCCTTCTAAAAAGCCCCTATTTCATTCCCCCTCCCCCTGCTCACTAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTAAAAAGCCCCTATTTCATTCCCCCTCCCCCTGCTCACTAACCC  250

seq1  ACACACTAACACTTCCCTTTCCTGGCATTCCCCTACACTGGGGCTTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTAACACTTCCCTTTCCTGGCATTCCCCTACACTGGGGCTTTTCA  300

seq1  CCAGACCAAGGGCCTCTCCTCTCATTGATATCCCACAAGAACATTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCAAGGGCCTCTCCTCTCATTGATATCCCACAAGAACATTCTCTG  350

seq1  TTACATATGCAGCTGAAGCCATGGTTCCCTCCATGTGCACTCTTGGGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATGCAGCTGAAGCCATGGTTCCCTCCATGTGCACTCTTGGGTTG  400

seq1  GTGCTTTAGTCCTTGGGAGCTCTAGGGGTACTGGTTGGTACATATTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTAGTCCTTGGGAGCTCTAGGGGTACTGGTTGGTACATATTGTTG  450

seq1  TTCCTCCTATGAAGCTGCAAACCTCTTGATCTCCTTAGGTCCTTTCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTATGAAGCTGCAAACCTCTTGATCTCCTTAGGTCCTTTCCCTG  500

seq1  GCTCCTCCATTGGATACTCTGTGCTCAGTACAATGGATGGCTGTGTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCATTGGATACTCTGTGCTCAGTACAATGGATGGCTGTGTGAGT  550

seq1  TCACCTCTATAATAAATCTTTTTATTAAGCCCTGCACAAGCTAGTGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCTATAATAAATCTTTTTATTAAGCCCTGCACAAGCTAGTGTTTG  600

seq1  AATACCTGGTCATTAGGAAATGGTCCTGTGTATCTTAAGATTGTGGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTGGTCATTAGGAAATGGTCCTGTGTATCTTAAGATTGTGGAAAG  650

seq1  GAAACTTGACTGTGAAACCTAGTACCACTTCCTGTGCATTTCTATTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGACTGTGAAACCTAGTACCACTTCCTGTGCATTTCTATTTCTT  700

seq1  TCTTACTCACAAATGATTAAGTAGCATCATATACTTGTTCCACTCTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCACAAATGATTAAGTAGCATCATATACTTGTTCCACTCTCCCC  750

seq1  AAAGATTTCCTACCACAATAATATACCTTAAAAATATTAGCTAAGTAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTCCTACCACAATAATATACCTTAAAAATATTAGCTAAGTAATC  800

seq1  TAGTTCCTGAAGTAGTTATGTTCTTGGTCATAGCAATAATAAAAGTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTGAAGTAGTTATGTTCTTGGTCATAGCAATAATAAAAGTTATT  850

seq1  AATACAGTATCCATAACACTACCACAGAAACGAAATCATGGCTAAGAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGTATCCATAACACTACCACAGAAACGAAATCATGGCTAAGAATA  900

seq1  AATGTGAATAACTTTAATAATTAAGCCAAGACTGTAGGCAAAAGTCAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAATAACTTTAATAATTAAGCCAAGACTGTAGGCAAAAGTCAGCA  950

seq1  CTATTCATGAACAAGCAAATCAACCAGAAAGAAAAATGTATATTGGTAAA  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTATTCATGAACAAGCAAATCAACCAGAAAG-AAAATGTATATTGGTAAA  999

seq1  TCATTGTAGGTACTAAATGATATATAAAATGCTATACGATCAGGATATGA  1050
      ||||||||||||||||||||||||  |||||||||||||||| |||||||
seq2  TCATTGTAGGTACTAAATGATATAATAAATGCTATACGATCA-GATATGA  1048

seq1  CTAAAAAATCAAAAGAACAGAAAACAAATTATGAGACATGTAGAATGTGT  1100
      ||  |||||| ||||||||| ||| | ||| |||||||||||||||||||
seq2  CT--AAAATC-AAAGAACAGGAAA-ACATTTTGAGACATGTAGAATGTGT  1094

seq1  G-GGTTTCATGGCTGCTGTAAAATAGATGAGATAAGCCTAACTTTATGAA  1149
      | || ||||||||||||||||||| |||  ||  ||||| || |||||||
seq2  GTGGGTTCATGGCTGCTGTAAAAT-GATTGGAATAGCCTTAC-TTATGAA  1142

seq1  ACAAAAACTTTTTTTCACCCCATGCT  1175
      |||||     ||||||| ||||||||
seq2  ACAAA---CCTTTTTCA-CCCATGCT  1164


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