BAC Information

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BAC

Clone NameB6Ng01-118L24
Chromosome1 (Build37)
Map Location 56,489,376 - 56,490,456
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626009, 9130227L01Rik
Downstream geneHsfy2, Satb2, EG329160, 9130024F11Rik, LOC100042869, LOC383509, 1700066M21Rik, 1110034B05Rik, 9430016H08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118L24.bB6Ng01-118L24.g
ACCDH923147DH923148
length1,1861,086
definitionDH923147|Mus musculus domesticus DNA, BAC clone: B6Ng01-118L24, 5' end.DH923148|Mus musculus domesticus DNA, BAC clone: B6Ng01-118L24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacctgaggaataccgaagggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaatggctaggatcaaaaattcagatgacagc
agatgctggcaaggatgtggagaaagagaaacactcctccattgctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaactacccatagttctaccggcagattcagcaaaacctttcttgggc
atatacccagaagatgttccaactggtaataagaacacatgctccactat
gttcatagcagtcctatttataatagggagaaactggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctgctacaaacaatgaatttataaaatttttaggcaa
atggatggatctagaggttatcatcctgagtgaggtaacccaatcacaaa
agaagtcacttgatatgcactcactgataagtggatattagcccagaaac
ctagaatacccaaggtataatttccaaaacacaagaaaatcaagaagaag
gaagaacagcacatggatacttcattcctccctagaatagggaacaaaat
actcatggaaggagttgcagagacaaagtttggagctaagatgaaaggat
ggaccatccagagactgccccacccgagggtccataccataatcagccac
caaacgcagacactattgcatatgccagcaagattttgctgaaaggaccc
tgatatagctgcctcgtgtgaggctatgtcagtgcctggcaaatacagaa
gtggatattcacagtcatctataggttgggaacacagagcccccaatgga
gaagctagagaaagtacccaaggagctgaagagtctgcaccctataagtg
gaacacatatgaactaatcagtaccccagagctcgtgtctctagctgcat
atgtagcagagatagctagcagccatcattggaagagaggccccctgaat
tcaacattatatgccccagttacagggaactcaggtcaagagtggcatgg
aatgcttagggaaagaccagggcagggggggaaggt
gaattcattggccttaagaaggccacaccaatgattgtctctgatgtctg
tgttctgactggatctggatgaaaacccaagacatcaggagttcaggcag
gtcagttcagcatgtctgacgatgacattcaccaaggttatatattctgt
gatatataaatctcaaaacaaaactttaatatcatcaagataaccttttt
gttttttttctctgaaatctagttcttcagaagatctccttctatcaaat
ctgatccatataattttggaaggtgtaaataccttaattaccttttccaa
aaacacaaagacaaaaccttttccccaaatcagcatagccttcagctggt
aaccaggaaaacctgtagcttgccctccgtcccacaggaacaataaaaca
accacaatacacaaaatcacacacattttagcctatttaggcctttctaa
tttgttatgtcaggatattaacccaaaatttctgttcagcccacattaga
cagaatatgagtatcctgtaagactcattagagcaatgtatctttatctt
taaagcaattaattcaaacttccactaatatctgcatataggaagcagat
agtttttaattgttgagctctctttgaacagcccagatcaataactcaaa
agaggacttcttaagtttggtatttggagttttgttaggtggtctttggc
tcttagtgggagcaccatcagctcagatgggaaaattccataaaactata
tgtatacatttatatatgggattacatgtatcatagatttcttttaggaa
aacagataattgtgtgatttttgtgggtttttcagacatcctcattgtaa
ttttacccagttcccttcttctcctatacttatctccctccctctcctta
ggagcccccttcccatcttccttatcagaggactttcaggatgtcagctt
tcccagacattcctgatgggctcaagaggagagagcaaatattattttac
atatggcaacatgtcacttttggagcacatatactggagtaacacatttt
ttctatgacagtgcatagtgtataaagcatgtatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_56489376_56490456
seq2: B6Ng01-118L24.g_87_1151

seq1  GCCACACCAATGATTGTCTCTGATGTCTGTGTTCTGACTGGATCTGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCAATGATTGTCTCTGATGTCTGTGTTCTGACTGGATCTGGATG  50

seq1  AAAACCCAAGACATCAGGAGTTCAGGCAGGTCAGTTCAGCATGTCTGACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAAGACATCAGGAGTTCAGGCAGGTCAGTTCAGCATGTCTGACG  100

seq1  ATGACATTCACCAAGGTTATATATTCTGTGATATATAAATCTCAAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTCACCAAGGTTATATATTCTGTGATATATAAATCTCAAAACAA  150

seq1  AACTTTAATATCATCAAGATAACCTTTTTGTTTTTTTTCTCTGAAATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAATATCATCAAGATAACCTTTTTGTTTTTTTTCTCTGAAATCTA  200

seq1  GTTCTTCAGAAGATCTCCTTCTATCAAATCTGATCCATATAATTTTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCAGAAGATCTCCTTCTATCAAATCTGATCCATATAATTTTGGAA  250

seq1  GGTGTAAATACCTTAATTACCTTTTCCAAAAACACAAAGACAAAACCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAAATACCTTAATTACCTTTTCCAAAAACACAAAGACAAAACCTTT  300

seq1  TCCCCAAATCAGCATAGCCTTCAGCTGGTAACCAGGAAAACCTGTAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAATCAGCATAGCCTTCAGCTGGTAACCAGGAAAACCTGTAGCTT  350

seq1  GCCCTCCGTCCCACAGGAACAATAAAACAACCACAATACACAAAATCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCGTCCCACAGGAACAATAAAACAACCACAATACACAAAATCACA  400

seq1  CACATTTTAGCCTATTTAGGCCTTTCTAATTTGTTATGTCAGGATATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTAGCCTATTTAGGCCTTTCTAATTTGTTATGTCAGGATATTAA  450

seq1  CCCAAAATTTCTGTTCAGCCCACATTAGACAGAATATGAGTATCCTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAATTTCTGTTCAGCCCACATTAGACAGAATATGAGTATCCTGTAA  500

seq1  GACTCATTAGAGCAATGTATCTTTATCTTTAAAGCAATTAATTCAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATTAGAGCAATGTATCTTTATCTTTAAAGCAATTAATTCAAACTT  550

seq1  CCACTAATATCTGCATATAGGAAGCAGATAGTTTTTAATTGTTGAGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAATATCTGCATATAGGAAGCAGATAGTTTTTAATTGTTGAGCTCT  600

seq1  CTTTGAACAGCCCAGATCAATAACTCAAAAGAGGACTTCTTAAGTTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACAGCCCAGATCAATAACTCAAAAGAGGACTTCTTAAGTTTGGT  650

seq1  ATTTGGAGTTTTGTTAGGTGGTCTTTGGCTCTTAGTGGGAGCACCATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGTTTTGTTAGGTGGTCTTTGGCTCTTAGTGGGAGCACCATCAG  700

seq1  CTCAGATGGGAAAATTCCATAAAACTATATGTATACATTTATATATGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATGGGAAAATTCCATAAAACTATATGTATACATTTATATATGGGA  750

seq1  TTACATGTATCATAGATTTCTTTTAGGAAAACAGATAATTGTGTGATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTATCATAGATTTCTTTTAGGAAAACAGATAATTGTGTGATTTT  800

seq1  TGTGGGTTTTTCAGACATCCTCATTGTAATTTTACCCAGTTCCCTTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTTTTTCAGACATCCTCATTGTAATTTTACCCAGTTCCCTTCTTC  850

seq1  TCCTATACTTATCTCCCTCCCTCTCCTTAGGAGCCCCCTTCCCATCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATACTTATCTCCCTCCCTCTCCTTAGGAGCCCCCTTCCCATCTTCC  900

seq1  TTATCAGAGGACTTTCAAGGATGTCAGCTTTCCCAGACATTCCTGATGGG  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATCAGAGGACTTTC-AGGATGTCAGCTTTCCCAGACATTCCTGATGGG  949

seq1  CTCAAAGAGGAGAGAAGCAAATATTATTTTAACATATTGGCAAACATGTC  1000
      ||| |||||||||| ||||||||||||||| ||||| |||| ||||||||
seq2  CTC-AAGAGGAGAG-AGCAAATATTATTTT-ACATA-TGGC-AACATGTC  994

seq1  ACTTTTTGGAAGCACAATATAACTGAGTAAACAAACATTTTTCTAAATGA  1050
      ||||||  | ||||| |||||   |||||   | |||||||| |  ||||
seq2  ACTTTT--GGAGCAC-ATATACTGGAGTA---ACACATTTTT-TCTATGA  1037

seq1  CCAGTGCATAGTGGTATAAAAGCATGTATGG  1081
       ||||||||||| |||| |||||||||||||
seq2  -CAGTGCATAGT-GTAT-AAAGCATGTATGG  1065