BAC Information

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BAC

Clone NameB6Ng01-119A11
Chromosome1 (Build37)
Map Location 107,721,031 - 107,722,204
singlet/doubletsinglet
Overlap geneTnfrsf11a
Upstream geneCdh20, Rnf152, LOC100041985, Pign, LOC666249, 2310035C23Rik, LOC100042023
Downstream geneEG635504, Zcchc2, EG435634, Phlpp, LOC626075, Bcl2, LOC100042085, Fvt1, Vps4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119A11.bB6Ng01-119A11.g
ACCDH923347DH923348
length1,1691,156
definitionDH923347|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A11, 5' end.DH923348|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcactgagccatgtactggttcccattgtggccccatgctga
ggctggaaccagagctttgtgccagacaagctttctgccctgagcttcac
cctctcccccagccctgggtacattataaccaaatactcagggatgctgc
tactgggctgtaacacttgcagtgggtatgtttatataatgagagaaagt
caaacacacagaggcagagaatgacacaatggtgaccaggggcaggagga
aggaaatgaggagatgtaggtcagagactgtagtagcaggtgtataagat
aaacacgctcagtgaagagtattgtactggatgagaactgctaatttagt
caattttagttcttcttgccacataaaaatctccttctgacacaatagat
aacttaatctattttattatggtaacgactttgccctcaaatttatccta
ttacatcatgctgtacaagttagatatataaaaataattatattaaaaat
gagtagaaaattataacatgaagctctcttcttttttttctttcagctaa
tttgtggaattgggtcaatgatgcttgcagtagtctaagtggaaataagg
taaaagtgtttaatgcctccttgaagtcctgccacaggctctagagctgt
aactagccaactatggagcacactgcttaccaggcagttaaacctccagc
ccagaactgatccctgctgagtaagtcagagcctaatgtcttcattatac
cccgtgcccacccctccgctgagccccatgctactcctgagccatactgt
agtcttcattccaattctgtgatctccacgtgtgtatttttagacctgac
cttgatcacctaatacagattcctaggaggaaccatttatgacgtttctt
tactctgtagttatttaataaatcttctactctgacataatttcaaaaat
tacaaaaaaaaattaagcatgaaagtcctggcacgatgcacaagttcacc
agtagctttcactttaccacacagattcattctttgctttttctgtatgt
gaacaagtgggcctggaaatcacacagagtgatggacatagtatagtctt
ctgttctaaattctacatgcacattaagaagacataagtctttgtctaac
agtaaatttacgaatgaaa
gaattccatgctgtaactactatttttgaaatgttgtaaaatcaagcttt
taatttgtatactgacagccaagatttagcccatggtttataattgcaag
aaactgttcccttttctagatacttctaattctcaaattttgcaaataca
actcaatttaagagagcctacagttccttattttatagggcatttaagag
ctcatactggattgccctgaccccttagttcttacactcgttcgcgaccg
gccaggaaagacgcaacaaaccggaatcttctgcggcaaaagctttattg
cttacatcttcaggagcaagagagcaagagcaagagagagaatggcgaaa
ccccgtccctttttaaggagaattatcctccgcctaggacgtgtcactcc
ctgattggctgcagcccatcggccgagttgtcgtcacggggaaggcagag
cacatggagtggagaactacccttggcacatgcgcagattatttgtttac
cacttagaacacaggatgtcagcgccatcttgtaacggcgaatgtgaggg
tggctccccacacttagtgagggcaatgccacagcagatttgtataccag
gcagattataggccttacacaggaacaacaattggtcaaacaatctcatt
ctttacatcatcaaaacaataatagcttgagacaatagtttggtatttct
agagaatgtacacatcaaattgtaaagacttgtcctcaatatcctcagtt
tctcctgtacaaataatggtgttaatccttaagaactatacctaatcaat
aatggcaaatggttgtacctcaaatttctgaattttaattttagaaatta
aaaacgtacatgcgactactgacacctttcagctttctggtggcactgct
ttacaggaaaagctactaaatgttctaaatagtcatggctatgttgtttt
ctagcttgggtccatcaattaaacgataatgaactgttatgcaacaagca
tgaatgtggcgcaatacataccatgttcgggatcttaatccaggacagtt
gaaccggttgtgaacttaacgtttccttataaagggacgtttcctacccg
atttaatcgtcttaatatggacgaactcgtgcctggactcacatgcctac
ttctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_107721031_107722204
seq2: B6Ng01-119A11.b_47_1215

seq1  GAATTCTGTCACTGAGCCATGTACTGGTTCCCATTGTGGCCCCATGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCACTGAGCCATGTACTGGTTCCCATTGTGGCCCCATGCTGA  50

seq1  GGCTGGAACCAGAGCTTTGTGCCAGACAAGCTTTCTGCCCTGAGCTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAACCAGAGCTTTGTGCCAGACAAGCTTTCTGCCCTGAGCTTCAC  100

seq1  CCTCTCCCCCAGCCCTGGGTACATTATAACCAAATACTCAGGGATGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCCAGCCCTGGGTACATTATAACCAAATACTCAGGGATGCTGC  150

seq1  TACTGGGCTGTAACACTTGCAGTGGGTATGTTTATATAATGAGAGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGCTGTAACACTTGCAGTGGGTATGTTTATATAATGAGAGAAAGT  200

seq1  CAAACACACAGAGGCAGAGAATGACACAATGGTGACCAGGGGCAGGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACAGAGGCAGAGAATGACACAATGGTGACCAGGGGCAGGAGGA  250

seq1  AGGAAATGAGGAGATGTAGGTCAGAGACTGTAGTAGCAGGTGTATAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGAGGAGATGTAGGTCAGAGACTGTAGTAGCAGGTGTATAAGAT  300

seq1  AAACACGCTCAGTGAAGAGTATTGTACTGGATGAGAACTGCTAATTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGCTCAGTGAAGAGTATTGTACTGGATGAGAACTGCTAATTTAGT  350

seq1  CAATTTTAGTTCTTCTTGCCACATAAAAATCTCCTTCTGACACAATAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAGTTCTTCTTGCCACATAAAAATCTCCTTCTGACACAATAGAT  400

seq1  AACTTAATCTATTTTATTATGGTAACGACTTTGCCCTCAAATTTATCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAATCTATTTTATTATGGTAACGACTTTGCCCTCAAATTTATCCTA  450

seq1  TTACATCATGCTGTACAAGTTAGATATATAAAAATAATTATATTAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCATGCTGTACAAGTTAGATATATAAAAATAATTATATTAAAAAT  500

seq1  GAGTAGAAAATTATAACATGAAGCTCTCTTCTTTTTTTTCTTTCAGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAAAATTATAACATGAAGCTCTCTTCTTTTTTTTCTTTCAGCTAA  550

seq1  TTTGTGGAATTGGGTCAATGATGCTTGCAGTAGTCTAAGTGGAAATAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGAATTGGGTCAATGATGCTTGCAGTAGTCTAAGTGGAAATAAGG  600

seq1  TAAAAGTGTTTAATGCCTCCTTGAAGTCCTGCCACAGGCTCTAGAGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGTTTAATGCCTCCTTGAAGTCCTGCCACAGGCTCTAGAGCTGT  650

seq1  AACTAGCCAACTATGGAGCACACTGCTTACCAGGCAGTTAAACCTCCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCCAACTATGGAGCACACTGCTTACCAGGCAGTTAAACCTCCAGC  700

seq1  CCAGAACTGATCCCTGCTGAGTAAGTCAGAGCCTAATGTCTTCATTATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACTGATCCCTGCTGAGTAAGTCAGAGCCTAATGTCTTCATTATAC  750

seq1  CCCGTGCCCACCCCTCCGCTGAGCCCCATGCTACTCCTGAGCCATACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGCCCACCCCTCCGCTGAGCCCCATGCTACTCCTGAGCCATACTGT  800

seq1  AGTCTTCATTCCAATTCTGTGATCTCCACGTGTGTATTTTTAGACCTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCATTCCAATTCTGTGATCTCCACGTGTGTATTTTTAGACCTGAC  850

seq1  CTTGATCACCTAATACAGATTCCTAGGAGGAACCATTTATGACGTTTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCACCTAATACAGATTCCTAGGAGGAACCATTTATGACGTTTCTT  900

seq1  TACTCTGTAGTTATTTAATAAATCTTCTACTCTGACATAATTTCAAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGTAGTTATTTAATAAATCTTCTACTCTGACATAATTTCAAAAAT  950

seq1  TAC-AAAAAAAATTAAGCAATGAAAGTCCTGGCACGATGCACAAGTTCAC  999
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  TACAAAAAAAAATTAAGC-ATGAAAGTCCTGGCACGATGCACAAGTTCAC  999

seq1  CAGTAGCTTTCACTTTACCACACAGATTCATTCTTTGCTTTTTCTGTATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCTTTCACTTTACCACACAGATTCATTCTTTGCTTTTTCTGTATG  1049

seq1  TGAACAAAGTGGGCCTGGAATCAACACAGAGTGAATGGACATAGTATAGT  1099
      ||||| ||||||||||||||   |||||||||| ||||||||||||||||
seq2  TGAAC-AAGTGGGCCTGGAAATCACACAGAGTG-ATGGACATAGTATAGT  1097

seq1  CCTCTGTTCTTAAATATCTACATGCACATTAAGAAGACAT-AGTCTTTGT  1148
      | ||||||| ||||| |||||||||||||||||||||||| |||||||||
seq2  CTTCTGTTC-TAAAT-TCTACATGCACATTAAGAAGACATAAGTCTTTGT  1145

seq1  CTAACAGTAAATTTACCAGAATGAAA  1174
      ||||||||||||||||  ||||||||
seq2  CTAACAGTAAATTTAC--GAATGAAA  1169